EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000022308 (Gene tree)
Gene ID: -
Gene Symbol: slbp
Alias: cb157|sb:cb157|si:dkey-102m7.2
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4617 bases
Position: chrCCOE01000852.1:145217-149833
Accession: ZDB-GENE-030131-9686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000028825	SLBP_RNA_bind	PF15247.6	5.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000029591	-	780	-	ENSACIP00000028825	259 (aa)	-	-

Gene Model

Click here to download ENSACIG00000022308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000022308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000022308	slbp	92	53.909	ENSG00000163950	SLBP	80	59.606	Homo_sapiens
ENSACIG00000022308	slbp	97	76.692	ENSAPOG00000004953	slbp	93	76.692	Acanthochromis_polyacanthus
ENSACIG00000022308	slbp	62	66.258	ENSAMEG00000016915	SLBP	88	59.606	Ailuropoda_melanoleuca
ENSACIG00000022308	slbp	96	76.628	ENSAOCG00000024545	slbp	93	76.628	Amphiprion_ocellaris
ENSACIG00000022308	slbp	96	77.395	ENSAPEG00000017629	slbp	93	77.395	Amphiprion_percula
ENSACIG00000022308	slbp	94	79.608	ENSATEG00000016358	slbp	90	79.608	Anabas_testudineus
ENSACIG00000022308	slbp	76	55.276	ENSAPLG00000015989	-	88	58.291	Anas_platyrhynchos
ENSACIG00000022308	slbp	76	60.000	ENSANAG00000034769	SLBP	80	59.606	Aotus_nancymaae
ENSACIG00000022308	slbp	99	76.866	ENSACLG00000007036	-	96	76.779	Astatotilapia_calliptera
ENSACIG00000022308	slbp	97	58.238	ENSAMXG00000014527	slbp	93	58.621	Astyanax_mexicanus
ENSACIG00000022308	slbp	79	58.937	ENSBTAG00000001328	SLBP	82	54.918	Bos_taurus
ENSACIG00000022308	slbp	76	60.000	ENSCJAG00000001790	SLBP	69	57.619	Callithrix_jacchus
ENSACIG00000022308	slbp	79	57.692	ENSCAFG00000015016	SLBP	82	54.065	Canis_familiaris
ENSACIG00000022308	slbp	79	57.692	ENSCAFG00020012334	SLBP	82	54.065	Canis_lupus_dingo
ENSACIG00000022308	slbp	79	58.937	ENSCHIG00000019364	SLBP	82	54.918	Capra_hircus
ENSACIG00000022308	slbp	76	60.000	ENSTSYG00000000376	SLBP	80	59.606	Carlito_syrichta
ENSACIG00000022308	slbp	61	56.250	ENSCAPG00000016340	SLBP	85	58.788	Cavia_aperea
ENSACIG00000022308	slbp	76	57.789	ENSCPOG00000000031	SLBP	70	59.804	Cavia_porcellus
ENSACIG00000022308	slbp	92	53.909	ENSCATG00000029173	SLBP	80	59.606	Cercocebus_atys
ENSACIG00000022308	slbp	62	66.258	ENSCLAG00000008157	SLBP	83	54.286	Chinchilla_lanigera
ENSACIG00000022308	slbp	92	54.812	ENSCPBG00000000746	SLBP	82	54.812	Chrysemys_picta_bellii
ENSACIG00000022308	slbp	76	59.799	ENSCANG00000041008	SLBP	87	58.911	Colobus_angolensis_palliatus
ENSACIG00000022308	slbp	76	56.281	ENSCGRG00001012991	-	71	58.128	Cricetulus_griseus_chok1gshd
ENSACIG00000022308	slbp	94	51.429	ENSCGRG00001009760	-	83	53.012	Cricetulus_griseus_chok1gshd
ENSACIG00000022308	slbp	94	51.429	ENSCGRG00000004506	Slbp	83	53.012	Cricetulus_griseus_crigri
ENSACIG00000022308	slbp	94	72.800	ENSCSEG00000020337	-	90	72.908	Cynoglossus_semilaevis
ENSACIG00000022308	slbp	97	70.472	ENSCVAG00000019592	-	94	70.472	Cyprinodon_variegatus
ENSACIG00000022308	slbp	96	59.160	ENSDARG00000100558	slbp	83	59.542	Danio_rerio
ENSACIG00000022308	slbp	83	57.534	ENSDNOG00000047539	SLBP	88	52.692	Dasypus_novemcinctus
ENSACIG00000022308	slbp	63	60.976	ENSDORG00000003028	Slbp	91	66.883	Dipodomys_ordii
ENSACIG00000022308	slbp	79	54.808	ENSETEG00000004641	SLBP	93	53.165	Echinops_telfairi
ENSACIG00000022308	slbp	53	65.942	ENSEASG00005022714	SLBP	86	59.091	Equus_asinus_asinus
ENSACIG00000022308	slbp	74	60.309	ENSECAG00000011689	SLBP	60	59.898	Equus_caballus
ENSACIG00000022308	slbp	94	60.311	ENSELUG00000012854	slbp	90	62.646	Esox_lucius
ENSACIG00000022308	slbp	63	61.212	ENSFCAG00000000169	SLBP	81	59.113	Felis_catus
ENSACIG00000022308	slbp	92	54.202	ENSFALG00000010003	-	84	54.202	Ficedula_albicollis
ENSACIG00000022308	slbp	63	65.060	ENSFDAG00000007592	SLBP	89	53.441	Fukomys_damarensis
ENSACIG00000022308	slbp	96	72.093	ENSFHEG00000007497	slbp	94	71.705	Fundulus_heteroclitus
ENSACIG00000022308	slbp	59	75.159	ENSGMOG00000015352	slbp	100	73.750	Gadus_morhua
ENSACIG00000022308	slbp	92	54.132	ENSGALG00000015712	SLBP	84	54.132	Gallus_gallus
ENSACIG00000022308	slbp	97	73.256	ENSGAFG00000019577	slbp	93	73.256	Gambusia_affinis
ENSACIG00000022308	slbp	96	69.076	ENSGACG00000019596	slbp	94	69.076	Gasterosteus_aculeatus
ENSACIG00000022308	slbp	88	54.825	ENSGAGG00000012096	SLBP	87	56.164	Gopherus_agassizii
ENSACIG00000022308	slbp	92	53.909	ENSGGOG00000003167	SLBP	80	59.606	Gorilla_gorilla
ENSACIG00000022308	slbp	99	77.239	ENSHBUG00000003338	-	96	77.154	Haplochromis_burtoni
ENSACIG00000022308	slbp	62	58.434	ENSHGLG00000010461	-	73	52.709	Heterocephalus_glaber_female
ENSACIG00000022308	slbp	53	66.429	ENSHGLG00000005955	-	78	55.330	Heterocephalus_glaber_female
ENSACIG00000022308	slbp	62	55.422	ENSHGLG00000008313	-	70	50.739	Heterocephalus_glaber_female
ENSACIG00000022308	slbp	62	56.627	ENSHGLG00100010510	-	70	51.724	Heterocephalus_glaber_male
ENSACIG00000022308	slbp	62	58.434	ENSHGLG00100014906	-	73	52.709	Heterocephalus_glaber_male
ENSACIG00000022308	slbp	62	65.644	ENSHGLG00100014018	-	91	58.883	Heterocephalus_glaber_male
ENSACIG00000022308	slbp	95	70.079	ENSHCOG00000013425	slbp	91	70.079	Hippocampus_comes
ENSACIG00000022308	slbp	83	60.829	ENSIPUG00000016780	slbp	91	55.422	Ictalurus_punctatus
ENSACIG00000022308	slbp	63	65.060	ENSSTOG00000003262	SLBP	82	53.878	Ictidomys_tridecemlineatus
ENSACIG00000022308	slbp	63	65.663	ENSJJAG00000002394	-	69	58.621	Jaculus_jaculus
ENSACIG00000022308	slbp	76	57.286	ENSJJAG00000020549	-	69	59.113	Jaculus_jaculus
ENSACIG00000022308	slbp	95	71.984	ENSKMAG00000008187	slbp	92	71.984	Kryptolebias_marmoratus
ENSACIG00000022308	slbp	95	74.708	ENSLBEG00000024709	slbp	92	74.708	Labrus_bergylta
ENSACIG00000022308	slbp	93	50.598	ENSLACG00000014623	SLBP	86	50.407	Latimeria_chalumnae
ENSACIG00000022308	slbp	94	60.078	ENSLOCG00000011027	slbp	85	59.690	Lepisosteus_oculatus
ENSACIG00000022308	slbp	78	59.606	ENSLAFG00000012933	SLBP	90	54.978	Loxodonta_africana
ENSACIG00000022308	slbp	76	60.000	ENSMFAG00000030130	SLBP	79	54.315	Macaca_fascicularis
ENSACIG00000022308	slbp	92	52.400	ENSMMUG00000032303	SLBP	86	59.135	Macaca_mulatta
ENSACIG00000022308	slbp	79	59.135	ENSMLEG00000024639	SLBP	79	58.768	Mandrillus_leucophaeus
ENSACIG00000022308	slbp	95	72.093	ENSMAMG00000001046	-	92	72.093	Mastacembelus_armatus
ENSACIG00000022308	slbp	99	77.239	ENSMZEG00005017261	-	96	77.154	Maylandia_zebra
ENSACIG00000022308	slbp	76	59.184	ENSMGAG00000013085	SLBP	87	59.184	Meleagris_gallopavo
ENSACIG00000022308	slbp	94	51.429	ENSMAUG00000009490	Slbp	83	53.012	Mesocricetus_auratus
ENSACIG00000022308	slbp	76	59.500	ENSMICG00000014244	SLBP	80	59.113	Microcebus_murinus
ENSACIG00000022308	slbp	94	51.429	ENSMOCG00000015826	Slbp	87	58.706	Microtus_ochrogaster
ENSACIG00000022308	slbp	99	65.504	ENSMMOG00000010181	slbp	98	65.504	Mola_mola
ENSACIG00000022308	slbp	80	57.143	ENSMODG00000004304	SLBP	89	53.441	Monodelphis_domestica
ENSACIG00000022308	slbp	97	75.000	ENSMALG00000013883	-	69	75.000	Monopterus_albus
ENSACIG00000022308	slbp	94	51.020	MGP_CAROLIEiJ_G0027117	Slbp	84	58.209	Mus_caroli
ENSACIG00000022308	slbp	94	51.020	ENSMUSG00000004642	Slbp	85	58.209	Mus_musculus
ENSACIG00000022308	slbp	94	51.020	MGP_PahariEiJ_G0016901	Slbp	84	58.209	Mus_pahari
ENSACIG00000022308	slbp	94	51.020	MGP_SPRETEiJ_G0028113	Slbp	85	58.209	Mus_spretus
ENSACIG00000022308	slbp	61	60.736	ENSMPUG00000011139	SLBP	79	60.843	Mustela_putorius_furo
ENSACIG00000022308	slbp	63	62.424	ENSMLUG00000004425	SLBP	81	53.769	Myotis_lucifugus
ENSACIG00000022308	slbp	76	57.286	ENSNGAG00000020799	Slbp	69	59.113	Nannospalax_galili
ENSACIG00000022308	slbp	88	80.258	ENSNBRG00000006044	-	88	80.258	Neolamprologus_brichardi
ENSACIG00000022308	slbp	76	60.000	ENSNLEG00000000048	SLBP	80	59.606	Nomascus_leucogenys
ENSACIG00000022308	slbp	62	65.432	ENSMEUG00000002501	SLBP	89	63.690	Notamacropus_eugenii
ENSACIG00000022308	slbp	62	67.485	ENSODEG00000012641	SLBP	73	60.194	Octodon_degus
ENSACIG00000022308	slbp	98	77.068	ENSONIG00000017469	-	95	77.068	Oreochromis_niloticus
ENSACIG00000022308	slbp	78	59.024	ENSOANG00000014243	SLBP	88	58.019	Ornithorhynchus_anatinus
ENSACIG00000022308	slbp	94	68.699	ENSORLG00000024887	-	89	68.699	Oryzias_latipes
ENSACIG00000022308	slbp	93	69.136	ENSORLG00020007798	slbp	88	69.136	Oryzias_latipes_hni
ENSACIG00000022308	slbp	94	68.293	ENSORLG00015016656	slbp	89	68.293	Oryzias_latipes_hsok
ENSACIG00000022308	slbp	93	67.901	ENSOMEG00000010818	slbp	89	68.293	Oryzias_melastigma
ENSACIG00000022308	slbp	76	59.000	ENSOGAG00000009750	SLBP	82	53.061	Otolemur_garnettii
ENSACIG00000022308	slbp	63	65.663	ENSOARG00000016090	SLBP	88	59.606	Ovis_aries
ENSACIG00000022308	slbp	92	53.909	ENSPPAG00000033300	SLBP	80	59.606	Pan_paniscus
ENSACIG00000022308	slbp	63	60.606	ENSPPRG00000016897	SLBP	89	53.909	Panthera_pardus
ENSACIG00000022308	slbp	53	65.942	ENSPTIG00000015057	SLBP	86	58.857	Panthera_tigris_altaica
ENSACIG00000022308	slbp	76	60.000	ENSPTRG00000015832	SLBP	80	59.606	Pan_troglodytes
ENSACIG00000022308	slbp	76	60.000	ENSPANG00000004932	SLBP	80	59.606	Papio_anubis
ENSACIG00000022308	slbp	96	58.462	ENSPKIG00000006183	slbp	86	59.127	Paramormyrops_kingsleyae
ENSACIG00000022308	slbp	93	63.333	ENSPMGG00000017684	-	100	63.333	Periophthalmus_magnuspinnatus
ENSACIG00000022308	slbp	95	51.210	ENSPEMG00000018369	Slbp	84	52.778	Peromyscus_maniculatus_bairdii
ENSACIG00000022308	slbp	80	54.795	ENSPCIG00000013575	SLBP	70	51.172	Phascolarctos_cinereus
ENSACIG00000022308	slbp	97	73.643	ENSPFOG00000000462	slbp	93	73.643	Poecilia_formosa
ENSACIG00000022308	slbp	97	72.868	ENSPLAG00000008300	slbp	93	72.868	Poecilia_latipinna
ENSACIG00000022308	slbp	97	73.643	ENSPMEG00000020807	slbp	93	73.643	Poecilia_mexicana
ENSACIG00000022308	slbp	97	74.031	ENSPREG00000004561	slbp	93	74.031	Poecilia_reticulata
ENSACIG00000022308	slbp	92	53.909	ENSPPYG00000014529	SLBP	69	59.606	Pongo_abelii
ENSACIG00000022308	slbp	76	60.000	ENSPCOG00000017399	SLBP	80	59.606	Propithecus_coquereli
ENSACIG00000022308	slbp	92	50.417	ENSPVAG00000002807	SLBP	81	52.459	Pteropus_vampyrus
ENSACIG00000022308	slbp	99	77.239	ENSPNYG00000005451	-	96	77.154	Pundamilia_nyererei
ENSACIG00000022308	slbp	95	59.533	ENSPNAG00000018503	slbp	92	59.144	Pygocentrus_nattereri
ENSACIG00000022308	slbp	94	51.020	ENSRNOG00000037162	Slbp	83	52.610	Rattus_norvegicus
ENSACIG00000022308	slbp	92	53.909	ENSRBIG00000039159	SLBP	80	59.606	Rhinopithecus_bieti
ENSACIG00000022308	slbp	92	54.132	ENSRROG00000030081	SLBP	84	54.315	Rhinopithecus_roxellana
ENSACIG00000022308	slbp	65	58.721	ENSSBOG00000033897	SLBP	86	58.286	Saimiri_boliviensis_boliviensis
ENSACIG00000022308	slbp	80	54.505	ENSSHAG00000013939	SLBP	82	50.965	Sarcophilus_harrisii
ENSACIG00000022308	slbp	94	62.055	ENSSFOG00015019429	slbp	89	62.055	Scleropages_formosus
ENSACIG00000022308	slbp	96	74.427	ENSSMAG00000016028	-	93	74.427	Scophthalmus_maximus
ENSACIG00000022308	slbp	97	77.821	ENSSDUG00000000855	-	93	77.821	Seriola_dumerili
ENSACIG00000022308	slbp	60	75.484	ENSSLDG00000022893	-	92	75.484	Seriola_lalandi_dorsalis
ENSACIG00000022308	slbp	88	57.456	ENSSLDG00000007554	-	72	57.018	Seriola_lalandi_dorsalis
ENSACIG00000022308	slbp	93	48.963	ENSSPUG00000016007	SLBP	87	52.245	Sphenodon_punctatus
ENSACIG00000022308	slbp	95	79.608	ENSSPAG00000004021	slbp	89	82.533	Stegastes_partitus
ENSACIG00000022308	slbp	95	52.016	ENSSSCG00000008676	SLBP	82	53.469	Sus_scrofa
ENSACIG00000022308	slbp	92	55.462	ENSTGUG00000010626	-	88	55.187	Taeniopygia_guttata
ENSACIG00000022308	slbp	93	72.000	ENSTRUG00000000688	slbp	91	70.980	Takifugu_rubripes
ENSACIG00000022308	slbp	93	66.935	ENSTNIG00000000484	-	96	66.935	Tetraodon_nigroviridis
ENSACIG00000022308	slbp	63	34.545	ENSTBEG00000004085	SLBP	50	54.321	Tupaia_belangeri
ENSACIG00000022308	slbp	62	66.667	ENSTTRG00000010901	-	88	59.406	Tursiops_truncatus
ENSACIG00000022308	slbp	62	61.728	ENSTTRG00000004010	-	99	55.789	Tursiops_truncatus
ENSACIG00000022308	slbp	78	58.537	ENSUAMG00000012990	SLBP	81	54.286	Ursus_americanus
ENSACIG00000022308	slbp	51	67.407	ENSUMAG00000006119	SLBP	86	59.429	Ursus_maritimus
ENSACIG00000022308	slbp	79	57.212	ENSVVUG00000015578	-	82	53.659	Vulpes_vulpes
ENSACIG00000022308	slbp	94	51.626	ENSXETG00000003876	slbp	88	51.626	Xenopus_tropicalis
ENSACIG00000022308	slbp	88	77.729	ENSXCOG00000008275	slbp	87	77.729	Xiphophorus_couchianus
ENSACIG00000022308	slbp	97	73.256	ENSXMAG00000001331	-	92	73.256	Xiphophorus_maculatus