EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000022433 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2%2C subunit C
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 1826 bases
Position: chrCCOE01000363.1:619806-621631
Accession: ZDB-GENE-030131-2469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000028997	RNase_H2_suC	PF08615.11	1.1e-19	1	1
ENSACIP00000029006	RNase_H2_suC	PF08615.11	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000029767	-	411	-	ENSACIP00000028997	136 (aa)	-	-
ENSACIT00000029777	-	420	-	ENSACIP00000029006	139 (aa)	-	-

Gene Model

Click here to download ENSACIG00000022433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000022433's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000022433	rnaseh2c	100	86.765	ENSAPOG00000012901	rnaseh2c	99	86.765	Acanthochromis_polyacanthus
ENSACIG00000022433	rnaseh2c	100	85.294	ENSAOCG00000016855	rnaseh2c	100	85.294	Amphiprion_ocellaris
ENSACIG00000022433	rnaseh2c	100	86.029	ENSAPEG00000009850	rnaseh2c	100	86.029	Amphiprion_percula
ENSACIG00000022433	rnaseh2c	100	83.824	ENSATEG00000014395	rnaseh2c	100	83.824	Anabas_testudineus
ENSACIG00000022433	rnaseh2c	100	88.235	ENSACLG00000016950	rnaseh2c	100	88.235	Astatotilapia_calliptera
ENSACIG00000022433	rnaseh2c	99	62.963	ENSAMXG00000001210	rnaseh2c	100	62.963	Astyanax_mexicanus
ENSACIG00000022433	rnaseh2c	99	55.970	ENSCPBG00000023408	-	96	55.970	Chrysemys_picta_bellii
ENSACIG00000022433	rnaseh2c	100	80.882	ENSCSEG00000005808	rnaseh2c	99	80.882	Cynoglossus_semilaevis
ENSACIG00000022433	rnaseh2c	100	80.147	ENSCVAG00000006337	rnaseh2c	100	80.147	Cyprinodon_variegatus
ENSACIG00000022433	rnaseh2c	100	66.176	ENSDARG00000089637	rnaseh2c	99	66.176	Danio_rerio
ENSACIG00000022433	rnaseh2c	86	46.667	ENSEBUG00000014939	rnaseh2c	77	46.667	Eptatretus_burgeri
ENSACIG00000022433	rnaseh2c	99	71.852	ENSELUG00000007345	rnaseh2c	99	71.852	Esox_lucius
ENSACIG00000022433	rnaseh2c	96	77.692	ENSFHEG00000002419	rnaseh2c	96	78.626	Fundulus_heteroclitus
ENSACIG00000022433	rnaseh2c	65	73.034	ENSGMOG00000008727	rnaseh2c	99	73.034	Gadus_morhua
ENSACIG00000022433	rnaseh2c	100	77.941	ENSGAFG00000016755	rnaseh2c	83	77.941	Gambusia_affinis
ENSACIG00000022433	rnaseh2c	99	56.716	ENSGAGG00000008193	-	96	56.716	Gopherus_agassizii
ENSACIG00000022433	rnaseh2c	100	88.971	ENSHBUG00000012806	rnaseh2c	100	88.971	Haplochromis_burtoni
ENSACIG00000022433	rnaseh2c	100	72.794	ENSHCOG00000007177	rnaseh2c	100	72.794	Hippocampus_comes
ENSACIG00000022433	rnaseh2c	100	63.235	ENSIPUG00000018044	rnaseh2c	100	63.235	Ictalurus_punctatus
ENSACIG00000022433	rnaseh2c	100	80.147	ENSKMAG00000004184	rnaseh2c	100	80.147	Kryptolebias_marmoratus
ENSACIG00000022433	rnaseh2c	100	80.292	ENSLBEG00000005742	rnaseh2c	100	80.292	Labrus_bergylta
ENSACIG00000022433	rnaseh2c	95	57.364	ENSLACG00000010120	-	93	57.576	Latimeria_chalumnae
ENSACIG00000022433	rnaseh2c	100	83.088	ENSMAMG00000021610	rnaseh2c	100	83.088	Mastacembelus_armatus
ENSACIG00000022433	rnaseh2c	100	88.971	ENSMZEG00005004796	rnaseh2c	100	88.971	Maylandia_zebra
ENSACIG00000022433	rnaseh2c	100	83.824	ENSMMOG00000002869	rnaseh2c	98	86.400	Mola_mola
ENSACIG00000022433	rnaseh2c	100	83.942	ENSMALG00000012198	rnaseh2c	100	83.942	Monopterus_albus
ENSACIG00000022433	rnaseh2c	100	88.971	ENSNBRG00000001462	rnaseh2c	100	88.971	Neolamprologus_brichardi
ENSACIG00000022433	rnaseh2c	100	88.235	ENSONIG00000005338	rnaseh2c	99	88.235	Oreochromis_niloticus
ENSACIG00000022433	rnaseh2c	100	78.676	ENSORLG00000023473	rnaseh2c	100	78.676	Oryzias_latipes
ENSACIG00000022433	rnaseh2c	100	78.676	ENSORLG00020019053	rnaseh2c	91	78.676	Oryzias_latipes_hni
ENSACIG00000022433	rnaseh2c	100	79.412	ENSORLG00015017067	rnaseh2c	91	79.412	Oryzias_latipes_hsok
ENSACIG00000022433	rnaseh2c	100	78.676	ENSOMEG00000018607	rnaseh2c	100	78.676	Oryzias_melastigma
ENSACIG00000022433	rnaseh2c	100	59.559	ENSPKIG00000019331	rnaseh2c	100	59.559	Paramormyrops_kingsleyae
ENSACIG00000022433	rnaseh2c	100	75.000	ENSPFOG00000009415	rnaseh2c	100	75.000	Poecilia_formosa
ENSACIG00000022433	rnaseh2c	100	75.735	ENSPLAG00000023330	rnaseh2c	100	75.735	Poecilia_latipinna
ENSACIG00000022433	rnaseh2c	100	75.735	ENSPMEG00000003696	rnaseh2c	100	75.735	Poecilia_mexicana
ENSACIG00000022433	rnaseh2c	100	71.429	ENSPREG00000015384	rnaseh2c	73	71.429	Poecilia_reticulata
ENSACIG00000022433	rnaseh2c	100	88.971	ENSPNYG00000014766	rnaseh2c	100	88.971	Pundamilia_nyererei
ENSACIG00000022433	rnaseh2c	99	62.963	ENSPNAG00000019111	rnaseh2c	99	62.963	Pygocentrus_nattereri
ENSACIG00000022433	rnaseh2c	99	68.148	ENSSFOG00015005760	rnaseh2c	99	68.148	Scleropages_formosus
ENSACIG00000022433	rnaseh2c	100	83.088	ENSSMAG00000017738	rnaseh2c	100	83.088	Scophthalmus_maximus
ENSACIG00000022433	rnaseh2c	100	83.824	ENSSDUG00000017285	rnaseh2c	100	83.824	Seriola_dumerili
ENSACIG00000022433	rnaseh2c	100	83.824	ENSSLDG00000016030	rnaseh2c	100	83.824	Seriola_lalandi_dorsalis
ENSACIG00000022433	rnaseh2c	94	53.435	ENSSPUG00000000842	-	87	53.030	Sphenodon_punctatus
ENSACIG00000022433	rnaseh2c	100	81.618	ENSSPAG00000007536	rnaseh2c	100	81.618	Stegastes_partitus
ENSACIG00000022433	rnaseh2c	100	75.000	ENSTRUG00000021845	rnaseh2c	100	75.000	Takifugu_rubripes
ENSACIG00000022433	rnaseh2c	100	80.147	ENSTNIG00000000431	rnaseh2c	100	80.147	Tetraodon_nigroviridis
ENSACIG00000022433	rnaseh2c	99	49.254	ENSXETG00000032466	-	98	49.254	Xenopus_tropicalis
ENSACIG00000022433	rnaseh2c	100	76.471	ENSXCOG00000001611	rnaseh2c	100	76.471	Xiphophorus_couchianus
ENSACIG00000022433	rnaseh2c	100	78.676	ENSXMAG00000003147	rnaseh2c	83	78.676	Xiphophorus_maculatus