EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000022447 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 8040 bases
Position: chrCCOE01000855.1:132351-140390
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000028989	RVT_1	PF00078.27	8.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000029758	-	768	-	ENSACIP00000028989	255 (aa)	-	-

Gene Model

Click here to download ENSACIG00000022447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000022447's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000022447	-	60	36.095	ENSACIG00000023684	-	77	36.095
ENSACIG00000022447	-	78	38.991	ENSACIG00000019176	-	88	38.991

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000022447	-	84	36.752	ENSAOCG00000004500	-	62	36.752	Amphiprion_ocellaris
ENSACIG00000022447	-	76	39.437	ENSAOCG00000018248	-	84	39.437	Amphiprion_ocellaris
ENSACIG00000022447	-	86	35.470	ENSACLG00000010837	-	58	35.470	Astatotilapia_calliptera
ENSACIG00000022447	-	69	56.701	ENSACLG00000012369	-	65	56.701	Astatotilapia_calliptera
ENSACIG00000022447	-	71	36.318	ENSAMXG00000040763	-	51	36.318	Astyanax_mexicanus
ENSACIG00000022447	-	85	56.682	ENSCVAG00000000484	-	78	56.682	Cyprinodon_variegatus
ENSACIG00000022447	-	71	34.783	ENSHBUG00000023598	-	73	34.783	Haplochromis_burtoni
ENSACIG00000022447	-	86	33.054	ENSLACG00000022376	-	51	33.054	Latimeria_chalumnae
ENSACIG00000022447	-	86	35.983	ENSLACG00000022331	-	72	35.983	Latimeria_chalumnae
ENSACIG00000022447	-	86	35.897	ENSMZEG00005006211	-	58	35.897	Maylandia_zebra
ENSACIG00000022447	-	83	38.528	ENSMMOG00000007110	-	83	38.528	Mola_mola
ENSACIG00000022447	-	89	37.398	ENSMMOG00000003125	-	81	37.398	Mola_mola
ENSACIG00000022447	-	88	35.417	ENSORLG00000030126	-	55	35.417	Oryzias_latipes
ENSACIG00000022447	-	79	35.294	ENSORLG00000028976	-	58	35.294	Oryzias_latipes
ENSACIG00000022447	-	84	36.522	ENSORLG00015007976	-	62	36.522	Oryzias_latipes_hsok
ENSACIG00000022447	-	71	35.025	ENSORLG00015007703	-	51	35.025	Oryzias_latipes_hsok
ENSACIG00000022447	-	75	32.701	ENSOMEG00000008379	-	72	34.874	Oryzias_melastigma
ENSACIG00000022447	-	84	36.681	ENSOMEG00000022009	-	50	36.681	Oryzias_melastigma
ENSACIG00000022447	-	73	32.796	ENSOMEG00000022778	-	50	32.796	Oryzias_melastigma
ENSACIG00000022447	-	52	36.184	ENSPMGG00000010144	-	62	36.184	Periophthalmus_magnuspinnatus
ENSACIG00000022447	-	68	32.812	ENSPLAG00000008560	-	58	32.812	Poecilia_latipinna
ENSACIG00000022447	-	84	60.515	ENSPMEG00000003715	-	78	60.515	Poecilia_mexicana
ENSACIG00000022447	-	58	39.394	ENSPNYG00000000591	-	77	39.394	Pundamilia_nyererei
ENSACIG00000022447	-	81	39.556	ENSPNYG00000012547	-	73	39.556	Pundamilia_nyererei
ENSACIG00000022447	-	58	39.394	ENSPNYG00000022953	-	73	39.394	Pundamilia_nyererei
ENSACIG00000022447	-	79	32.127	ENSPNAG00000014375	-	54	32.127	Pygocentrus_nattereri
ENSACIG00000022447	-	73	32.821	ENSSLDG00000008400	-	85	32.821	Seriola_lalandi_dorsalis
ENSACIG00000022447	-	87	32.245	ENSXETG00000031743	-	96	32.245	Xenopus_tropicalis