EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000022729 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-107m4.1
Alias: -
Full Name: si:ch211-107m4.1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 11417 bases
Position: chrCCOE01000363.1:829187-840603
Accession: ZDB-GENE-081107-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000029356	SAP	PF02037.27	6.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000030134	-	2004	-	ENSACIP00000029356	667 (aa)	-	-

Gene Model

Click here to download ENSACIG00000022729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000022729's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000022729	si:ch211-107m4.1	82	34.102	ENSACIG00000024072	HNRNPUL1	76	34.448
ENSACIG00000022729	si:ch211-107m4.1	82	32.815	ENSACIG00000012138	hnrnpub	94	32.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSG00000214753	HNRNPUL2	87	35.267	Homo_sapiens
ENSACIG00000022729	si:ch211-107m4.1	91	64.486	ENSAPOG00000005128	si:ch211-107m4.1	99	64.551	Acanthochromis_polyacanthus
ENSACIG00000022729	si:ch211-107m4.1	85	66.218	ENSAOCG00000017297	si:ch211-107m4.1	89	66.050	Amphiprion_ocellaris
ENSACIG00000022729	si:ch211-107m4.1	85	65.152	ENSAPEG00000009122	-	89	64.983	Amphiprion_percula
ENSACIG00000022729	si:ch211-107m4.1	67	40.471	ENSACAG00000000746	-	80	35.163	Anolis_carolinensis
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSANAG00000027153	-	87	35.267	Aotus_nancymaae
ENSACIG00000022729	si:ch211-107m4.1	89	77.575	ENSACLG00000018069	si:ch211-107m4.1	99	77.907	Astatotilapia_calliptera
ENSACIG00000022729	si:ch211-107m4.1	83	45.629	ENSAMXG00000033712	si:ch211-107m4.1	79	47.758	Astyanax_mexicanus
ENSACIG00000022729	si:ch211-107m4.1	71	39.293	ENSBTAG00000002510	HNRNPUL2	87	35.596	Bos_taurus
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSCJAG00000018709	-	87	35.801	Callithrix_jacchus
ENSACIG00000022729	si:ch211-107m4.1	71	39.062	ENSCAFG00000015686	-	87	35.562	Canis_familiaris
ENSACIG00000022729	si:ch211-107m4.1	71	39.062	ENSCAFG00020013120	-	87	35.562	Canis_lupus_dingo
ENSACIG00000022729	si:ch211-107m4.1	71	39.489	ENSCHIG00000020213	-	87	35.747	Capra_hircus
ENSACIG00000022729	si:ch211-107m4.1	71	36.926	ENSCCAG00000037674	-	86	34.404	Cebus_capucinus
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSCATG00000034588	-	87	35.160	Cercocebus_atys
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSCSAG00000006701	-	84	35.115	Chlorocebus_sabaeus
ENSACIG00000022729	si:ch211-107m4.1	63	42.857	ENSCPBG00000017963	-	84	36.707	Chrysemys_picta_bellii
ENSACIG00000022729	si:ch211-107m4.1	73	37.643	ENSCGRG00001017076	Hnrnpul2	87	35.160	Cricetulus_griseus_chok1gshd
ENSACIG00000022729	si:ch211-107m4.1	84	59.278	ENSCSEG00000005686	si:ch211-107m4.1	94	58.983	Cynoglossus_semilaevis
ENSACIG00000022729	si:ch211-107m4.1	88	59.360	ENSCVAG00000006862	si:ch211-107m4.1	96	58.833	Cyprinodon_variegatus
ENSACIG00000022729	si:ch211-107m4.1	85	42.857	ENSDARG00000056830	si:ch211-107m4.1	91	42.857	Danio_rerio
ENSACIG00000022729	si:ch211-107m4.1	72	39.029	ENSDNOG00000006508	-	87	35.401	Dasypus_novemcinctus
ENSACIG00000022729	si:ch211-107m4.1	75	38.318	ENSDORG00000008678	Hnrnpul2	87	35.213	Dipodomys_ordii
ENSACIG00000022729	si:ch211-107m4.1	71	39.250	ENSEASG00005011347	-	87	35.758	Equus_asinus_asinus
ENSACIG00000022729	si:ch211-107m4.1	71	39.053	ENSECAG00000020298	-	87	35.606	Equus_caballus
ENSACIG00000022729	si:ch211-107m4.1	76	75.610	ENSELUG00000008134	si:ch211-107m4.1	93	46.998	Esox_lucius
ENSACIG00000022729	si:ch211-107m4.1	71	39.062	ENSFCAG00000014766	-	87	35.562	Felis_catus
ENSACIG00000022729	si:ch211-107m4.1	88	61.783	ENSFHEG00000014731	si:ch211-107m4.1	99	61.783	Fundulus_heteroclitus
ENSACIG00000022729	si:ch211-107m4.1	89	60.222	ENSGAFG00000016579	si:ch211-107m4.1	97	60.222	Gambusia_affinis
ENSACIG00000022729	si:ch211-107m4.1	84	73.086	ENSGACG00000017006	si:ch211-107m4.1	87	73.086	Gasterosteus_aculeatus
ENSACIG00000022729	si:ch211-107m4.1	63	42.857	ENSGAGG00000016818	-	81	36.744	Gopherus_agassizii
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSGGOG00000011722	HNRNPUL2	87	35.213	Gorilla_gorilla
ENSACIG00000022729	si:ch211-107m4.1	88	77.595	ENSHBUG00000013076	si:ch211-107m4.1	97	77.595	Haplochromis_burtoni
ENSACIG00000022729	si:ch211-107m4.1	61	41.149	ENSHGLG00000003285	-	87	34.789	Heterocephalus_glaber_female
ENSACIG00000022729	si:ch211-107m4.1	84	40.752	ENSIPUG00000009518	si:ch211-107m4.1	89	40.752	Ictalurus_punctatus
ENSACIG00000022729	si:ch211-107m4.1	71	39.489	ENSSTOG00000004327	-	87	35.616	Ictidomys_tridecemlineatus
ENSACIG00000022729	si:ch211-107m4.1	69	39.545	ENSJJAG00000011206	Hnrnpul2	87	36.073	Jaculus_jaculus
ENSACIG00000022729	si:ch211-107m4.1	88	63.738	ENSKMAG00000003651	si:ch211-107m4.1	97	63.738	Kryptolebias_marmoratus
ENSACIG00000022729	si:ch211-107m4.1	71	37.223	ENSLACG00000009304	-	60	39.093	Latimeria_chalumnae
ENSACIG00000022729	si:ch211-107m4.1	71	39.448	ENSLAFG00000005377	-	87	36.115	Loxodonta_africana
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSMFAG00000041014	-	87	35.160	Macaca_fascicularis
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSMNEG00000036955	-	87	35.160	Macaca_nemestrina
ENSACIG00000022729	si:ch211-107m4.1	86	61.488	ENSMAMG00000021489	si:ch211-107m4.1	91	61.488	Mastacembelus_armatus
ENSACIG00000022729	si:ch211-107m4.1	90	77.228	ENSMZEG00005005136	si:ch211-107m4.1	99	77.558	Maylandia_zebra
ENSACIG00000022729	si:ch211-107m4.1	73	37.643	ENSMAUG00000013163	Hnrnpul2	87	34.750	Mesocricetus_auratus
ENSACIG00000022729	si:ch211-107m4.1	72	38.835	ENSMICG00000009943	-	87	35.464	Microcebus_murinus
ENSACIG00000022729	si:ch211-107m4.1	61	43.689	ENSMOCG00000020000	Hnrnpul2	85	41.379	Microtus_ochrogaster
ENSACIG00000022729	si:ch211-107m4.1	73	72.066	ENSMALG00000011564	si:ch211-107m4.1	94	60.714	Monopterus_albus
ENSACIG00000022729	si:ch211-107m4.1	71	39.293	MGP_CAROLIEiJ_G0022656	Hnrnpul2	87	35.714	Mus_caroli
ENSACIG00000022729	si:ch211-107m4.1	71	39.489	ENSMUSG00000071659	Hnrnpul2	87	35.866	Mus_musculus
ENSACIG00000022729	si:ch211-107m4.1	71	39.216	MGP_PahariEiJ_G0014151	Hnrnpul2	87	35.562	Mus_pahari
ENSACIG00000022729	si:ch211-107m4.1	61	42.069	MGP_SPRETEiJ_G0023569	Hnrnpul2	87	35.823	Mus_spretus
ENSACIG00000022729	si:ch211-107m4.1	71	39.489	ENSMPUG00000013707	-	86	35.518	Mustela_putorius_furo
ENSACIG00000022729	si:ch211-107m4.1	66	41.250	ENSMLUG00000000412	-	87	35.575	Myotis_lucifugus
ENSACIG00000022729	si:ch211-107m4.1	69	39.337	ENSNGAG00000012005	Hnrnpul2	87	34.901	Nannospalax_galili
ENSACIG00000022729	si:ch211-107m4.1	96	73.579	ENSNBRG00000000429	si:ch211-107m4.1	99	73.579	Neolamprologus_brichardi
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSNLEG00000004077	-	59	41.741	Nomascus_leucogenys
ENSACIG00000022729	si:ch211-107m4.1	88	77.100	ENSONIG00000005422	si:ch211-107m4.1	97	77.100	Oreochromis_niloticus
ENSACIG00000022729	si:ch211-107m4.1	72	39.029	ENSOCUG00000009474	-	87	35.303	Oryctolagus_cuniculus
ENSACIG00000022729	si:ch211-107m4.1	89	61.709	ENSORLG00000024574	si:ch211-107m4.1	99	61.551	Oryzias_latipes
ENSACIG00000022729	si:ch211-107m4.1	90	60.188	ENSOMEG00000018153	si:ch211-107m4.1	99	60.188	Oryzias_melastigma
ENSACIG00000022729	si:ch211-107m4.1	61	41.514	ENSOGAG00000003302	-	62	40.980	Otolemur_garnettii
ENSACIG00000022729	si:ch211-107m4.1	71	39.489	ENSOARG00000016817	-	87	35.596	Ovis_aries
ENSACIG00000022729	si:ch211-107m4.1	71	39.062	ENSPPRG00000006380	-	87	35.562	Panthera_pardus
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSPTRG00000034359	HNRNPUL2	87	35.573	Pan_troglodytes
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSPANG00000023745	-	98	35.115	Papio_anubis
ENSACIG00000022729	si:ch211-107m4.1	73	38.752	ENSPEMG00000015546	Hnrnpul2	87	36.061	Peromyscus_maniculatus_bairdii
ENSACIG00000022729	si:ch211-107m4.1	82	62.630	ENSPFOG00000008050	si:ch211-107m4.1	100	62.457	Poecilia_formosa
ENSACIG00000022729	si:ch211-107m4.1	89	60.159	ENSPLAG00000003485	si:ch211-107m4.1	97	60.000	Poecilia_latipinna
ENSACIG00000022729	si:ch211-107m4.1	89	60.952	ENSPMEG00000005490	si:ch211-107m4.1	97	60.794	Poecilia_mexicana
ENSACIG00000022729	si:ch211-107m4.1	89	59.781	ENSPREG00000014973	si:ch211-107m4.1	97	59.781	Poecilia_reticulata
ENSACIG00000022729	si:ch211-107m4.1	71	39.376	ENSPCAG00000010016	-	87	36.199	Procavia_capensis
ENSACIG00000022729	si:ch211-107m4.1	72	38.728	ENSPCOG00000013502	-	87	35.616	Propithecus_coquereli
ENSACIG00000022729	si:ch211-107m4.1	71	38.911	ENSPVAG00000003475	-	87	35.357	Pteropus_vampyrus
ENSACIG00000022729	si:ch211-107m4.1	73	38.418	ENSRNOG00000019507	Hnrnpul2	87	35.258	Rattus_norvegicus
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSRBIG00000037820	-	87	35.115	Rhinopithecus_bieti
ENSACIG00000022729	si:ch211-107m4.1	61	42.299	ENSRROG00000036561	-	87	35.115	Rhinopithecus_roxellana
ENSACIG00000022729	si:ch211-107m4.1	74	67.391	ENSSFOG00015006544	si:ch211-107m4.1	61	67.391	Scleropages_formosus
ENSACIG00000022729	si:ch211-107m4.1	88	62.360	ENSSMAG00000017226	si:ch211-107m4.1	99	62.360	Scophthalmus_maximus
ENSACIG00000022729	si:ch211-107m4.1	90	65.084	ENSSPAG00000006972	si:ch211-107m4.1	98	65.596	Stegastes_partitus
ENSACIG00000022729	si:ch211-107m4.1	66	40.042	ENSSSCG00000028542	-	84	35.358	Sus_scrofa
ENSACIG00000022729	si:ch211-107m4.1	85	61.235	ENSTRUG00000012843	si:ch211-107m4.1	91	61.235	Takifugu_rubripes
ENSACIG00000022729	si:ch211-107m4.1	82	58.803	ENSTNIG00000000741	si:ch211-107m4.1	100	58.191	Tetraodon_nigroviridis
ENSACIG00000022729	si:ch211-107m4.1	57	43.407	ENSTTRG00000002475	-	75	42.051	Tursiops_truncatus
ENSACIG00000022729	si:ch211-107m4.1	71	39.258	ENSUAMG00000025971	-	87	35.714	Ursus_americanus
ENSACIG00000022729	si:ch211-107m4.1	71	39.062	ENSVVUG00000029847	-	87	35.562	Vulpes_vulpes
ENSACIG00000022729	si:ch211-107m4.1	84	34.370	ENSXETG00000006015	hnrnpul2	85	35.039	Xenopus_tropicalis
ENSACIG00000022729	si:ch211-107m4.1	89	60.897	ENSXMAG00000003224	si:ch211-107m4.1	97	60.897	Xiphophorus_maculatus