EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000022831 (Gene tree)
Gene ID: -
Gene Symbol: srp54
Alias: zgc:55842|zgc:85713
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 2802 bases
Position: chrCCOE01000401.1:207983-210784
Accession: ZDB-GENE-040426-818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000029502	SRP54	PF00448.22	3.3e-77	1	1
ENSACIP00000029502	SRP54_N	PF02881.19	3.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000030282	-	1389	-	ENSACIP00000029502	462 (aa)	-	-

Gene Model

Click here to download ENSACIG00000022831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000022831's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000022831	srp54	97	94.655	ENSG00000100883	SRP54	100	97.674	Homo_sapiens
ENSACIG00000022831	srp54	97	98.218	ENSAPOG00000011314	srp54	89	98.218	Acanthochromis_polyacanthus
ENSACIG00000022831	srp54	97	94.655	ENSAMEG00000015544	SRP54	89	94.655	Ailuropoda_melanoleuca
ENSACIG00000022831	srp54	97	98.218	ENSAOCG00000019401	srp54	89	98.218	Amphiprion_ocellaris
ENSACIG00000022831	srp54	97	98.218	ENSAPEG00000001977	srp54	89	98.218	Amphiprion_percula
ENSACIG00000022831	srp54	97	98.441	ENSATEG00000013877	srp54	89	98.441	Anabas_testudineus
ENSACIG00000022831	srp54	97	93.987	ENSAPLG00000010125	SRP54	90	93.987	Anas_platyrhynchos
ENSACIG00000022831	srp54	82	89.710	ENSACAG00000010631	-	87	89.710	Anolis_carolinensis
ENSACIG00000022831	srp54	97	93.541	ENSACAG00000002103	-	89	93.541	Anolis_carolinensis
ENSACIG00000022831	srp54	59	76.642	ENSACAG00000001124	-	82	76.642	Anolis_carolinensis
ENSACIG00000022831	srp54	97	94.655	ENSANAG00000022133	SRP54	89	94.655	Aotus_nancymaae
ENSACIG00000022831	srp54	97	98.664	ENSACLG00000015866	srp54	89	98.664	Astatotilapia_calliptera
ENSACIG00000022831	srp54	97	96.659	ENSAMXG00000032669	SRP54	89	96.659	Astyanax_mexicanus
ENSACIG00000022831	srp54	97	94.655	ENSBTAG00000019085	SRP54	89	94.655	Bos_taurus
ENSACIG00000022831	srp54	97	73.051	WBGene00009012	F21D5.7	91	73.051	Caenorhabditis_elegans
ENSACIG00000022831	srp54	97	94.655	ENSCJAG00000006581	SRP54	89	94.655	Callithrix_jacchus
ENSACIG00000022831	srp54	97	94.655	ENSCAFG00000013331	SRP54	89	94.655	Canis_familiaris
ENSACIG00000022831	srp54	97	94.655	ENSCAFG00020023427	SRP54	89	94.655	Canis_lupus_dingo
ENSACIG00000022831	srp54	97	94.655	ENSCHIG00000026345	SRP54	89	94.655	Capra_hircus
ENSACIG00000022831	srp54	97	94.432	ENSTSYG00000002680	-	89	94.432	Carlito_syrichta
ENSACIG00000022831	srp54	97	83.742	ENSTSYG00000035333	-	89	83.742	Carlito_syrichta
ENSACIG00000022831	srp54	83	66.334	ENSCAPG00000008780	SRP54	84	66.334	Cavia_aperea
ENSACIG00000022831	srp54	97	94.209	ENSCPOG00000003691	SRP54	89	94.209	Cavia_porcellus
ENSACIG00000022831	srp54	86	93.699	ENSCCAG00000024179	SRP54	88	93.699	Cebus_capucinus
ENSACIG00000022831	srp54	97	94.655	ENSCATG00000034083	SRP54	89	94.655	Cercocebus_atys
ENSACIG00000022831	srp54	97	94.655	ENSCLAG00000015076	SRP54	89	94.655	Chinchilla_lanigera
ENSACIG00000022831	srp54	97	94.655	ENSCSAG00000015575	SRP54	89	94.655	Chlorocebus_sabaeus
ENSACIG00000022831	srp54	97	83.073	ENSCHOG00000008986	SRP54	93	83.073	Choloepus_hoffmanni
ENSACIG00000022831	srp54	97	94.209	ENSCPBG00000026195	SRP54	89	94.209	Chrysemys_picta_bellii
ENSACIG00000022831	srp54	96	84.842	ENSCING00000007380	-	88	84.842	Ciona_intestinalis
ENSACIG00000022831	srp54	97	94.655	ENSCANG00000028532	SRP54	89	94.655	Colobus_angolensis_palliatus
ENSACIG00000022831	srp54	97	95.100	ENSCGRG00001009525	-	89	95.100	Cricetulus_griseus_chok1gshd
ENSACIG00000022831	srp54	83	96.623	ENSCGRG00000009453	-	89	96.623	Cricetulus_griseus_crigri
ENSACIG00000022831	srp54	97	97.550	ENSCSEG00000012392	srp54	89	97.550	Cynoglossus_semilaevis
ENSACIG00000022831	srp54	97	97.773	ENSCVAG00000010395	srp54	89	97.773	Cyprinodon_variegatus
ENSACIG00000022831	srp54	97	96.659	ENSDARG00000098367	srp54	89	96.659	Danio_rerio
ENSACIG00000022831	srp54	97	94.655	ENSDNOG00000032525	SRP54	89	94.655	Dasypus_novemcinctus
ENSACIG00000022831	srp54	96	81.982	ENSDORG00000005159	-	96	81.982	Dipodomys_ordii
ENSACIG00000022831	srp54	97	78.842	FBgn0010747	Srp54k	88	78.842	Drosophila_melanogaster
ENSACIG00000022831	srp54	97	93.764	ENSETEG00000016307	-	89	93.764	Echinops_telfairi
ENSACIG00000022831	srp54	78	53.056	ENSETEG00000012102	-	85	53.056	Echinops_telfairi
ENSACIG00000022831	srp54	97	90.423	ENSEBUG00000009437	-	89	90.423	Eptatretus_burgeri
ENSACIG00000022831	srp54	97	94.655	ENSEASG00005002057	SRP54	89	94.655	Equus_asinus_asinus
ENSACIG00000022831	srp54	97	94.655	ENSECAG00000018042	SRP54	89	94.655	Equus_caballus
ENSACIG00000022831	srp54	97	77.060	ENSEEUG00000001511	SRP54	89	77.060	Erinaceus_europaeus
ENSACIG00000022831	srp54	97	96.214	ENSELUG00000003395	srp54	89	96.214	Esox_lucius
ENSACIG00000022831	srp54	97	94.878	ENSFCAG00000032033	SRP54	89	94.878	Felis_catus
ENSACIG00000022831	srp54	97	93.987	ENSFALG00000005995	SRP54	89	93.987	Ficedula_albicollis
ENSACIG00000022831	srp54	97	94.655	ENSFDAG00000016767	SRP54	90	94.655	Fukomys_damarensis
ENSACIG00000022831	srp54	97	97.996	ENSFHEG00000004263	srp54	97	92.478	Fundulus_heteroclitus
ENSACIG00000022831	srp54	92	90.071	ENSGMOG00000011391	srp54	88	90.071	Gadus_morhua
ENSACIG00000022831	srp54	97	93.987	ENSGALG00000023135	SRP54	89	93.987	Gallus_gallus
ENSACIG00000022831	srp54	97	97.996	ENSGAFG00000011586	srp54	89	97.996	Gambusia_affinis
ENSACIG00000022831	srp54	97	97.327	ENSGACG00000004181	srp54	100	98.387	Gasterosteus_aculeatus
ENSACIG00000022831	srp54	97	94.209	ENSGAGG00000014766	SRP54	89	94.209	Gopherus_agassizii
ENSACIG00000022831	srp54	97	94.655	ENSGGOG00000002926	SRP54	89	94.655	Gorilla_gorilla
ENSACIG00000022831	srp54	97	98.664	ENSHBUG00000005678	srp54	89	98.664	Haplochromis_burtoni
ENSACIG00000022831	srp54	97	94.655	ENSHGLG00000002850	SRP54	89	94.655	Heterocephalus_glaber_female
ENSACIG00000022831	srp54	97	63.778	ENSHGLG00100007281	-	88	63.778	Heterocephalus_glaber_male
ENSACIG00000022831	srp54	97	94.655	ENSHGLG00100005263	SRP54	89	94.655	Heterocephalus_glaber_male
ENSACIG00000022831	srp54	97	96.437	ENSHCOG00000021127	srp54	89	96.437	Hippocampus_comes
ENSACIG00000022831	srp54	97	95.768	ENSIPUG00000001420	srp54	89	95.768	Ictalurus_punctatus
ENSACIG00000022831	srp54	97	94.655	ENSSTOG00000016023	SRP54	89	94.655	Ictidomys_tridecemlineatus
ENSACIG00000022831	srp54	83	70.909	ENSJJAG00000016404	-	84	70.909	Jaculus_jaculus
ENSACIG00000022831	srp54	97	89.755	ENSJJAG00000013417	-	89	89.755	Jaculus_jaculus
ENSACIG00000022831	srp54	97	97.327	ENSKMAG00000007707	srp54	89	97.327	Kryptolebias_marmoratus
ENSACIG00000022831	srp54	97	98.441	ENSLBEG00000021122	srp54	89	98.441	Labrus_bergylta
ENSACIG00000022831	srp54	97	98.441	ENSLBEG00000018690	srp54	89	98.441	Labrus_bergylta
ENSACIG00000022831	srp54	97	93.987	ENSLACG00000017890	SRP54	89	93.987	Latimeria_chalumnae
ENSACIG00000022831	srp54	97	96.659	ENSLOCG00000009440	srp54	89	96.659	Lepisosteus_oculatus
ENSACIG00000022831	srp54	97	94.655	ENSLAFG00000012007	SRP54	89	94.655	Loxodonta_africana
ENSACIG00000022831	srp54	97	94.655	ENSMFAG00000044371	SRP54	89	94.655	Macaca_fascicularis
ENSACIG00000022831	srp54	97	94.655	ENSMMUG00000015073	FAM177A1	89	94.655	Macaca_mulatta
ENSACIG00000022831	srp54	97	94.655	ENSMNEG00000006947	SRP54	89	94.655	Macaca_nemestrina
ENSACIG00000022831	srp54	97	94.655	ENSMLEG00000042251	SRP54	89	94.655	Mandrillus_leucophaeus
ENSACIG00000022831	srp54	97	98.664	ENSMAMG00000004803	srp54	89	98.664	Mastacembelus_armatus
ENSACIG00000022831	srp54	97	98.664	ENSMZEG00005027528	srp54	89	98.664	Maylandia_zebra
ENSACIG00000022831	srp54	97	88.914	ENSMGAG00000012481	SRP54	89	88.914	Meleagris_gallopavo
ENSACIG00000022831	srp54	97	94.878	ENSMAUG00000014447	-	89	94.878	Mesocricetus_auratus
ENSACIG00000022831	srp54	97	94.655	ENSMICG00000010270	SRP54	89	94.655	Microcebus_murinus
ENSACIG00000022831	srp54	83	94.286	ENSMOCG00000000948	-	88	94.286	Microtus_ochrogaster
ENSACIG00000022831	srp54	96	97.753	ENSMMOG00000020303	srp54	97	97.753	Mola_mola
ENSACIG00000022831	srp54	97	94.655	ENSMODG00000012925	-	89	94.655	Monodelphis_domestica
ENSACIG00000022831	srp54	97	94.655	ENSMODG00000023150	-	89	94.655	Monodelphis_domestica
ENSACIG00000022831	srp54	96	99.323	ENSMALG00000009163	srp54	98	99.323	Monopterus_albus
ENSACIG00000022831	srp54	97	94.878	MGP_CAROLIEiJ_G0017754	-	89	94.878	Mus_caroli
ENSACIG00000022831	srp54	97	94.878	ENSMUSG00000112449	Srp54b	98	88.764	Mus_musculus
ENSACIG00000022831	srp54	97	94.878	ENSMUSG00000073079	Srp54a	100	97.273	Mus_musculus
ENSACIG00000022831	srp54	97	93.987	ENSMUSG00000079108	Srp54c	89	93.987	Mus_musculus
ENSACIG00000022831	srp54	97	94.878	MGP_PahariEiJ_G0029510	-	89	94.878	Mus_pahari
ENSACIG00000022831	srp54	97	94.655	ENSMPUG00000016302	SRP54	89	94.655	Mustela_putorius_furo
ENSACIG00000022831	srp54	97	93.987	ENSMLUG00000008958	SRP54	89	93.987	Myotis_lucifugus
ENSACIG00000022831	srp54	97	84.410	ENSNGAG00000019806	-	88	84.410	Nannospalax_galili
ENSACIG00000022831	srp54	83	98.442	ENSNBRG00000006000	srp54	88	98.442	Neolamprologus_brichardi
ENSACIG00000022831	srp54	97	94.655	ENSNLEG00000003496	SRP54	89	94.655	Nomascus_leucogenys
ENSACIG00000022831	srp54	73	98.214	ENSMEUG00000000138	-	76	98.214	Notamacropus_eugenii
ENSACIG00000022831	srp54	97	94.655	ENSODEG00000004865	SRP54	89	94.655	Octodon_degus
ENSACIG00000022831	srp54	97	98.664	ENSONIG00000011768	srp54	89	98.664	Oreochromis_niloticus
ENSACIG00000022831	srp54	97	94.655	ENSOANG00000014051	SRP54	89	94.655	Ornithorhynchus_anatinus
ENSACIG00000022831	srp54	96	95.281	ENSOCUG00000007838	SRP54	88	95.281	Oryctolagus_cuniculus
ENSACIG00000022831	srp54	97	98.441	ENSORLG00000010027	srp54	89	98.441	Oryzias_latipes
ENSACIG00000022831	srp54	97	98.441	ENSORLG00020001878	srp54	89	98.441	Oryzias_latipes_hni
ENSACIG00000022831	srp54	97	98.441	ENSORLG00015021866	srp54	89	98.441	Oryzias_latipes_hsok
ENSACIG00000022831	srp54	97	98.664	ENSOMEG00000020952	srp54	89	98.664	Oryzias_melastigma
ENSACIG00000022831	srp54	97	94.655	ENSOGAG00000012188	SRP54	89	94.655	Otolemur_garnettii
ENSACIG00000022831	srp54	97	94.655	ENSOARG00000007160	SRP54	89	94.655	Ovis_aries
ENSACIG00000022831	srp54	97	94.655	ENSPPAG00000017434	SRP54	89	94.655	Pan_paniscus
ENSACIG00000022831	srp54	97	93.987	ENSPPRG00000014047	SRP54	89	93.987	Panthera_pardus
ENSACIG00000022831	srp54	97	94.878	ENSPTIG00000000744	SRP54	85	94.878	Panthera_tigris_altaica
ENSACIG00000022831	srp54	97	94.655	ENSPTRG00000006259	FAM177A1	89	94.655	Pan_troglodytes
ENSACIG00000022831	srp54	97	94.655	ENSPANG00000023853	SRP54	89	94.655	Papio_anubis
ENSACIG00000022831	srp54	97	96.214	ENSPKIG00000001953	srp54	89	96.214	Paramormyrops_kingsleyae
ENSACIG00000022831	srp54	97	94.209	ENSPSIG00000006476	SRP54	89	94.209	Pelodiscus_sinensis
ENSACIG00000022831	srp54	97	97.773	ENSPMGG00000004127	srp54	97	97.773	Periophthalmus_magnuspinnatus
ENSACIG00000022831	srp54	96	83.747	ENSPEMG00000019634	-	93	80.587	Peromyscus_maniculatus_bairdii
ENSACIG00000022831	srp54	97	91.982	ENSPMAG00000006078	-	89	91.982	Petromyzon_marinus
ENSACIG00000022831	srp54	97	94.655	ENSPCIG00000016175	SRP54	89	94.655	Phascolarctos_cinereus
ENSACIG00000022831	srp54	97	97.996	ENSPFOG00000008870	srp54	89	97.996	Poecilia_formosa
ENSACIG00000022831	srp54	97	97.996	ENSPLAG00000009889	srp54	89	97.996	Poecilia_latipinna
ENSACIG00000022831	srp54	97	97.996	ENSPMEG00000008601	srp54	89	97.996	Poecilia_mexicana
ENSACIG00000022831	srp54	97	97.996	ENSPREG00000004505	srp54	89	97.996	Poecilia_reticulata
ENSACIG00000022831	srp54	97	89.087	ENSPPYG00000005739	SRP54	89	89.087	Pongo_abelii
ENSACIG00000022831	srp54	97	90.646	ENSPCAG00000006268	SRP54	89	90.646	Procavia_capensis
ENSACIG00000022831	srp54	97	92.444	ENSPCOG00000022473	SRP54	89	92.444	Propithecus_coquereli
ENSACIG00000022831	srp54	69	97.872	ENSPVAG00000010056	SRP54	82	97.872	Pteropus_vampyrus
ENSACIG00000022831	srp54	97	98.664	ENSPNYG00000009717	srp54	89	98.664	Pundamilia_nyererei
ENSACIG00000022831	srp54	97	96.437	ENSPNAG00000008544	srp54	89	96.437	Pygocentrus_nattereri
ENSACIG00000022831	srp54	97	94.655	ENSRNOG00000032776	Srp54a	89	94.655	Rattus_norvegicus
ENSACIG00000022831	srp54	97	94.655	ENSRROG00000041292	SRP54	89	94.655	Rhinopithecus_roxellana
ENSACIG00000022831	srp54	94	51.701	YPR088C	SRP54	81	51.701	Saccharomyces_cerevisiae
ENSACIG00000022831	srp54	92	93.443	ENSSBOG00000035145	SRP54	88	94.272	Saimiri_boliviensis_boliviensis
ENSACIG00000022831	srp54	62	92.708	ENSSHAG00000000671	SRP54	84	92.708	Sarcophilus_harrisii
ENSACIG00000022831	srp54	97	96.437	ENSSFOG00015013920	srp54	89	96.437	Scleropages_formosus
ENSACIG00000022831	srp54	97	97.550	ENSSMAG00000002441	srp54	84	97.550	Scophthalmus_maximus
ENSACIG00000022831	srp54	97	98.441	ENSSDUG00000018586	srp54	89	98.441	Seriola_dumerili
ENSACIG00000022831	srp54	97	98.218	ENSSLDG00000010476	srp54	89	98.218	Seriola_lalandi_dorsalis
ENSACIG00000022831	srp54	97	94.655	ENSSARG00000002744	SRP54	89	94.655	Sorex_araneus
ENSACIG00000022831	srp54	97	94.209	ENSSPUG00000013101	SRP54	89	94.209	Sphenodon_punctatus
ENSACIG00000022831	srp54	97	98.218	ENSSPAG00000002354	srp54	89	98.218	Stegastes_partitus
ENSACIG00000022831	srp54	97	94.655	ENSSSCG00000001955	SRP54	89	94.655	Sus_scrofa
ENSACIG00000022831	srp54	97	93.987	ENSTGUG00000011945	-	90	93.987	Taeniopygia_guttata
ENSACIG00000022831	srp54	97	97.996	ENSTRUG00000007057	srp54	89	97.996	Takifugu_rubripes
ENSACIG00000022831	srp54	97	97.550	ENSTNIG00000002589	srp54	89	97.550	Tetraodon_nigroviridis
ENSACIG00000022831	srp54	85	84.439	ENSTBEG00000011409	SRP54	88	84.439	Tupaia_belangeri
ENSACIG00000022831	srp54	97	84.410	ENSTTRG00000000928	SRP54	89	84.410	Tursiops_truncatus
ENSACIG00000022831	srp54	57	96.565	ENSUAMG00000012385	SRP54	100	96.565	Ursus_americanus
ENSACIG00000022831	srp54	97	94.655	ENSUMAG00000011234	SRP54	89	94.655	Ursus_maritimus
ENSACIG00000022831	srp54	97	94.432	ENSVPAG00000005668	SRP54	95	94.432	Vicugna_pacos
ENSACIG00000022831	srp54	97	94.655	ENSVVUG00000019962	SRP54	89	94.655	Vulpes_vulpes
ENSACIG00000022831	srp54	97	77.876	ENSXETG00000012290	srp54	89	77.899	Xenopus_tropicalis
ENSACIG00000022831	srp54	96	98.652	ENSXCOG00000004658	srp54	97	98.652	Xiphophorus_couchianus
ENSACIG00000022831	srp54	97	97.996	ENSXMAG00000018315	srp54	89	97.996	Xiphophorus_maculatus