EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000022922 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 14912 bases
Position: chrCCOE01000097.1:1432076-1446987
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000029614	Fox-1_C	PF12414.8	1.5e-26	1	1
ENSACIP00000029614	RRM_1	PF00076.22	5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000030394	-	633	-	ENSACIP00000029614	210 (aa)	-	-

Gene Model

Click here to download ENSACIG00000022922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000022922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000022922	-	66	85.507	ENSACIG00000001690	rbfox2	57	84.615
ENSACIG00000022922	-	89	59.070	ENSACIG00000005478	rbfox1	50	59.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000022922	-	82	66.505	ENSG00000100320	RBFOX2	66	61.677	Homo_sapiens
ENSACIG00000022922	-	78	67.839	ENSAMEG00000007228	RBFOX2	62	67.337	Ailuropoda_melanoleuca
ENSACIG00000022922	-	82	66.505	ENSANAG00000015245	RBFOX2	62	66.019	Aotus_nancymaae
ENSACIG00000022922	-	82	66.505	ENSCJAG00000019456	-	51	66.019	Callithrix_jacchus
ENSACIG00000022922	-	82	66.505	ENSTSYG00000014123	RBFOX2	62	58.704	Carlito_syrichta
ENSACIG00000022922	-	82	66.505	ENSCCAG00000036584	RBFOX2	51	66.019	Cebus_capucinus
ENSACIG00000022922	-	82	66.505	ENSCATG00000038655	RBFOX2	51	66.019	Cercocebus_atys
ENSACIG00000022922	-	89	64.414	ENSCSAG00000008110	RBFOX2	56	63.964	Chlorocebus_sabaeus
ENSACIG00000022922	-	78	68.020	ENSCHOG00000002887	RBFOX2	63	68.528	Choloepus_hoffmanni
ENSACIG00000022922	-	73	80.519	ENSCPBG00000023144	RBFOX2	59	61.751	Chrysemys_picta_bellii
ENSACIG00000022922	-	82	66.505	ENSCANG00000035832	RBFOX2	50	68.205	Colobus_angolensis_palliatus
ENSACIG00000022922	-	78	68.718	ENSCGRG00001017727	Rbfox2	52	54.472	Cricetulus_griseus_chok1gshd
ENSACIG00000022922	-	78	67.839	ENSCGRG00000014237	Rbfox2	60	54.472	Cricetulus_griseus_crigri
ENSACIG00000022922	-	78	84.431	ENSCVAG00000004491	rbfox2	76	85.030	Cyprinodon_variegatus
ENSACIG00000022922	-	83	84.659	ENSDARG00000052182	rbfox2	73	84.659	Danio_rerio
ENSACIG00000022922	-	79	68.878	ENSDORG00000015003	Rbfox2	58	58.716	Dipodomys_ordii
ENSACIG00000022922	-	78	84.337	ENSELUG00000000102	rbfox2	75	84.337	Esox_lucius
ENSACIG00000022922	-	82	66.505	ENSFCAG00000010061	RBFOX2	51	66.019	Felis_catus
ENSACIG00000022922	-	80	67.337	ENSFDAG00000006204	RBFOX2	56	66.834	Fukomys_damarensis
ENSACIG00000022922	-	71	92.810	ENSFHEG00000006384	-	95	92.157	Fundulus_heteroclitus
ENSACIG00000022922	-	78	83.735	ENSGAFG00000008448	rbfox2	75	84.337	Gambusia_affinis
ENSACIG00000022922	-	84	77.401	ENSGAGG00000025884	RBFOX2	62	53.629	Gopherus_agassizii
ENSACIG00000022922	-	82	66.505	ENSGGOG00000037332	RBFOX2	51	66.019	Gorilla_gorilla
ENSACIG00000022922	-	79	88.623	ENSIPUG00000016896	rbfox2	55	88.623	Ictalurus_punctatus
ENSACIG00000022922	-	78	95.181	ENSKMAG00000013354	-	82	95.092	Kryptolebias_marmoratus
ENSACIG00000022922	-	54	83.478	ENSLBEG00000026187	rbfox2	52	83.478	Labrus_bergylta
ENSACIG00000022922	-	82	66.505	ENSMFAG00000031994	RBFOX2	51	66.019	Macaca_fascicularis
ENSACIG00000022922	-	82	66.505	ENSMMUG00000014010	RBFOX2	50	68.205	Macaca_mulatta
ENSACIG00000022922	-	82	66.505	ENSMNEG00000034388	RBFOX2	51	66.019	Macaca_nemestrina
ENSACIG00000022922	-	82	66.505	ENSMLEG00000005854	RBFOX2	51	66.019	Mandrillus_leucophaeus
ENSACIG00000022922	-	53	78.571	ENSMGAG00000012724	RBFOX2	61	77.679	Meleagris_gallopavo
ENSACIG00000022922	-	82	66.505	ENSMICG00000035417	RBFOX2	62	58.704	Microcebus_murinus
ENSACIG00000022922	-	74	66.129	ENSMOCG00000009327	Rbfox2	52	54.472	Microtus_ochrogaster
ENSACIG00000022922	-	87	90.860	ENSMMOG00000007925	-	95	89.947	Mola_mola
ENSACIG00000022922	-	78	85.366	ENSMMOG00000008287	rbfox2	79	85.366	Mola_mola
ENSACIG00000022922	-	78	64.593	ENSMODG00000001122	RBFOX2	51	64.115	Monodelphis_domestica
ENSACIG00000022922	-	78	87.425	ENSMALG00000000623	rbfox2	71	88.024	Monopterus_albus
ENSACIG00000022922	-	90	86.842	ENSMALG00000002264	-	85	85.789	Monopterus_albus
ENSACIG00000022922	-	78	68.718	MGP_CAROLIEiJ_G0019957	Rbfox2	52	54.472	Mus_caroli
ENSACIG00000022922	-	78	68.718	ENSMUSG00000033565	Rbfox2	52	64.118	Mus_musculus
ENSACIG00000022922	-	78	68.718	MGP_PahariEiJ_G0019967	Rbfox2	53	68.205	Mus_pahari
ENSACIG00000022922	-	78	68.718	MGP_SPRETEiJ_G0020860	Rbfox2	52	54.472	Mus_spretus
ENSACIG00000022922	-	100	97.619	ENSNBRG00000001568	-	54	97.619	Neolamprologus_brichardi
ENSACIG00000022922	-	82	66.505	ENSNLEG00000034979	RBFOX2	51	66.019	Nomascus_leucogenys
ENSACIG00000022922	-	78	68.718	ENSOANG00000007489	RBFOX2	58	68.205	Ornithorhynchus_anatinus
ENSACIG00000022922	-	82	66.505	ENSPPAG00000035653	RBFOX2	51	66.019	Pan_paniscus
ENSACIG00000022922	-	82	66.505	ENSPPRG00000015635	RBFOX2	50	68.205	Panthera_pardus
ENSACIG00000022922	-	82	66.505	ENSPTIG00000019147	RBFOX2	51	66.019	Panthera_tigris_altaica
ENSACIG00000022922	-	97	56.170	ENSPTRG00000014305	RBFOX2	62	55.745	Pan_troglodytes
ENSACIG00000022922	-	82	66.505	ENSPANG00000007030	RBFOX2	51	66.019	Papio_anubis
ENSACIG00000022922	-	78	82.927	ENSPMGG00000007138	rbfox2	69	82.927	Periophthalmus_magnuspinnatus
ENSACIG00000022922	-	81	91.813	ENSPMGG00000016969	-	52	91.228	Periophthalmus_magnuspinnatus
ENSACIG00000022922	-	78	68.367	ENSPCIG00000021550	RBFOX2	50	67.857	Phascolarctos_cinereus
ENSACIG00000022922	-	78	96.386	ENSPFOG00000001869	-	52	96.386	Poecilia_formosa
ENSACIG00000022922	-	78	96.386	ENSPLAG00000002710	-	69	96.386	Poecilia_latipinna
ENSACIG00000022922	-	78	82.635	ENSPLAG00000017308	rbfox2	71	82.635	Poecilia_latipinna
ENSACIG00000022922	-	78	85.030	ENSPMEG00000007320	rbfox2	71	85.629	Poecilia_mexicana
ENSACIG00000022922	-	78	96.386	ENSPMEG00000013663	-	69	96.386	Poecilia_mexicana
ENSACIG00000022922	-	78	82.927	ENSPREG00000012955	rbfox2	70	82.927	Poecilia_reticulata
ENSACIG00000022922	-	81	95.930	ENSPREG00000016105	-	73	87.310	Poecilia_reticulata
ENSACIG00000022922	-	82	66.505	ENSRROG00000035715	RBFOX2	51	66.019	Rhinopithecus_roxellana
ENSACIG00000022922	-	82	66.505	ENSSBOG00000028291	RBFOX2	51	66.019	Saimiri_boliviensis_boliviensis
ENSACIG00000022922	-	82	66.995	ENSSSCG00000000152	RBFOX2	59	66.502	Sus_scrofa
ENSACIG00000022922	-	71	68.605	ENSTRUG00000007739	-	56	61.429	Takifugu_rubripes
ENSACIG00000022922	-	71	73.563	ENSTRUG00000002748	rbfox2	100	73.563	Takifugu_rubripes
ENSACIG00000022922	-	64	80.147	ENSTNIG00000006271	rbfox2	63	80.147	Tetraodon_nigroviridis
ENSACIG00000022922	-	98	59.322	ENSUAMG00000010612	RBFOX2	60	58.898	Ursus_americanus
ENSACIG00000022922	-	73	79.870	ENSVVUG00000023561	RBFOX2	51	68.205	Vulpes_vulpes
ENSACIG00000022922	-	89	59.574	ENSXETG00000000231	rbfox2	57	59.574	Xenopus_tropicalis
ENSACIG00000022922	-	61	83.206	ENSXCOG00000013643	rbfox2	66	83.969	Xiphophorus_couchianus