EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000023083 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 3408 bases
Position: chrCCOE01000401.1:517064-520471
Accession: ZDB-GENE-030729-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000029822	RRM_1	PF00076.22	4.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000030603	-	306	-	ENSACIP00000029822	101 (aa)	-	-

Gene Model

Click here to download ENSACIG00000023083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000023083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000023083	slirp	78	32.895	ENSACIG00000021815	-	76	32.895
ENSACIG00000023083	slirp	82	32.877	ENSACIG00000012959	-	55	30.120
ENSACIG00000023083	slirp	82	32.530	ENSACIG00000017341	hnrnpaba	58	32.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000023083	slirp	83	55.952	ENSG00000119705	SLIRP	92	58.571	Homo_sapiens
ENSACIG00000023083	slirp	97	82.653	ENSAPOG00000001298	slirp	98	82.653	Acanthochromis_polyacanthus
ENSACIG00000023083	slirp	81	52.439	ENSAMEG00000003975	SLIRP	90	52.439	Ailuropoda_melanoleuca
ENSACIG00000023083	slirp	98	84.848	ENSAOCG00000006342	slirp	100	84.848	Amphiprion_ocellaris
ENSACIG00000023083	slirp	98	84.848	ENSAPEG00000015917	slirp	100	84.848	Amphiprion_percula
ENSACIG00000023083	slirp	97	84.694	ENSAPEG00000015719	-	100	84.694	Amphiprion_percula
ENSACIG00000023083	slirp	97	76.531	ENSATEG00000013525	slirp	98	76.531	Anabas_testudineus
ENSACIG00000023083	slirp	95	60.417	ENSAMXG00000018693	slirp	96	60.417	Astyanax_mexicanus
ENSACIG00000023083	slirp	73	58.108	ENSCJAG00000016946	SLIRP	72	56.716	Callithrix_jacchus
ENSACIG00000023083	slirp	88	51.648	ENSCAFG00020015876	-	82	51.648	Canis_lupus_dingo
ENSACIG00000023083	slirp	74	56.000	ENSCCAG00000030130	SLIRP	69	56.000	Cebus_capucinus
ENSACIG00000023083	slirp	75	57.895	ENSCATG00000036327	SLIRP	72	59.701	Cercocebus_atys
ENSACIG00000023083	slirp	73	58.108	ENSCSAG00000011736	SLIRP	68	58.108	Chlorocebus_sabaeus
ENSACIG00000023083	slirp	77	65.385	ENSCPBG00000026327	SLIRP	79	65.385	Chrysemys_picta_bellii
ENSACIG00000023083	slirp	66	62.687	ENSCANG00000032892	SLIRP	68	62.687	Colobus_angolensis_palliatus
ENSACIG00000023083	slirp	99	42.157	ENSCGRG00001024068	Slirp	92	42.157	Cricetulus_griseus_chok1gshd
ENSACIG00000023083	slirp	99	42.157	ENSCGRG00000017440	Slirp	92	42.157	Cricetulus_griseus_crigri
ENSACIG00000023083	slirp	81	62.195	ENSCSEG00000015766	slirp	84	62.195	Cynoglossus_semilaevis
ENSACIG00000023083	slirp	77	84.615	ENSCVAG00000012504	slirp	77	84.615	Cyprinodon_variegatus
ENSACIG00000023083	slirp	93	77.660	ENSDARG00000097753	slirp	95	77.551	Danio_rerio
ENSACIG00000023083	slirp	73	51.351	ENSDNOG00000007721	SLIRP	68	50.667	Dasypus_novemcinctus
ENSACIG00000023083	slirp	75	55.263	ENSDORG00000012379	Slirp	68	55.263	Dipodomys_ordii
ENSACIG00000023083	slirp	75	55.263	ENSETEG00000010345	SLIRP	70	55.263	Echinops_telfairi
ENSACIG00000023083	slirp	73	59.459	ENSEASG00005020193	SLIRP	67	59.459	Equus_asinus_asinus
ENSACIG00000023083	slirp	96	50.000	ENSEEUG00000007257	SLIRP	97	50.000	Erinaceus_europaeus
ENSACIG00000023083	slirp	97	73.469	ENSELUG00000016800	slirp	96	73.469	Esox_lucius
ENSACIG00000023083	slirp	78	54.430	ENSFCAG00000036326	SLIRP	81	54.430	Felis_catus
ENSACIG00000023083	slirp	77	60.256	ENSFALG00000012583	SLIRP	85	56.667	Ficedula_albicollis
ENSACIG00000023083	slirp	84	54.023	ENSFDAG00000008347	SLIRP	77	54.023	Fukomys_damarensis
ENSACIG00000023083	slirp	79	76.250	ENSFHEG00000004709	slirp	87	76.250	Fundulus_heteroclitus
ENSACIG00000023083	slirp	98	68.687	ENSGMOG00000016948	slirp	95	68.687	Gadus_morhua
ENSACIG00000023083	slirp	94	54.167	ENSGALG00000031238	SLIRP	97	54.167	Gallus_gallus
ENSACIG00000023083	slirp	97	74.490	ENSGAFG00000010998	slirp	98	74.490	Gambusia_affinis
ENSACIG00000023083	slirp	77	82.051	ENSGACG00000020137	slirp	91	82.051	Gasterosteus_aculeatus
ENSACIG00000023083	slirp	91	59.140	ENSGAGG00000009953	SLIRP	64	59.140	Gopherus_agassizii
ENSACIG00000023083	slirp	83	55.952	ENSGGOG00000011059	-	76	55.952	Gorilla_gorilla
ENSACIG00000023083	slirp	87	47.778	ENSHGLG00000018491	SLIRP	81	47.778	Heterocephalus_glaber_female
ENSACIG00000023083	slirp	87	47.778	ENSHGLG00100014153	SLIRP	81	47.778	Heterocephalus_glaber_male
ENSACIG00000023083	slirp	93	79.787	ENSHCOG00000006795	slirp	95	79.787	Hippocampus_comes
ENSACIG00000023083	slirp	95	73.958	ENSIPUG00000010214	SLIRP	96	73.958	Ictalurus_punctatus
ENSACIG00000023083	slirp	88	49.451	ENSSTOG00000034316	SLIRP	82	49.451	Ictidomys_tridecemlineatus
ENSACIG00000023083	slirp	97	66.327	ENSKMAG00000002038	slirp	94	66.327	Kryptolebias_marmoratus
ENSACIG00000023083	slirp	97	67.347	ENSLBEG00000007564	slirp	98	67.347	Labrus_bergylta
ENSACIG00000023083	slirp	94	72.632	ENSLACG00000013434	SLIRP	91	72.632	Latimeria_chalumnae
ENSACIG00000023083	slirp	73	58.108	ENSMFAG00000042960	SLIRP	73	58.824	Macaca_fascicularis
ENSACIG00000023083	slirp	83	54.762	ENSMMUG00000029256	SLIRP	72	59.701	Macaca_mulatta
ENSACIG00000023083	slirp	73	58.108	ENSMNEG00000028921	SLIRP	73	58.824	Macaca_nemestrina
ENSACIG00000023083	slirp	67	58.824	ENSMLEG00000043644	SLIRP	68	59.701	Mandrillus_leucophaeus
ENSACIG00000023083	slirp	98	88.889	ENSMZEG00005004617	slirp	100	88.889	Maylandia_zebra
ENSACIG00000023083	slirp	100	43.564	ENSMAUG00000003857	Slirp	91	43.564	Mesocricetus_auratus
ENSACIG00000023083	slirp	76	55.844	ENSMICG00000012080	SLIRP	66	57.746	Microcebus_murinus
ENSACIG00000023083	slirp	96	46.465	ENSMOCG00000016019	Slirp	88	46.465	Microtus_ochrogaster
ENSACIG00000023083	slirp	97	82.653	ENSMMOG00000018268	slirp	98	82.653	Mola_mola
ENSACIG00000023083	slirp	69	60.000	ENSMODG00000005207	-	99	60.000	Monodelphis_domestica
ENSACIG00000023083	slirp	100	76.238	ENSMALG00000012581	slirp	100	76.238	Monopterus_albus
ENSACIG00000023083	slirp	85	50.000	MGP_CAROLIEiJ_G0017995	Slirp	81	50.000	Mus_caroli
ENSACIG00000023083	slirp	85	51.136	ENSMUSG00000021040	Slirp	79	51.136	Mus_musculus
ENSACIG00000023083	slirp	85	51.136	MGP_SPRETEiJ_G0018840	Slirp	79	51.136	Mus_spretus
ENSACIG00000023083	slirp	88	50.549	ENSMLUG00000029544	-	92	48.039	Myotis_lucifugus
ENSACIG00000023083	slirp	87	52.273	ENSMLUG00000024998	-	91	49.505	Myotis_lucifugus
ENSACIG00000023083	slirp	85	46.591	ENSNGAG00000016363	Slirp	85	46.591	Nannospalax_galili
ENSACIG00000023083	slirp	89	53.333	ENSNLEG00000027238	-	84	53.333	Nomascus_leucogenys
ENSACIG00000023083	slirp	89	53.333	ENSNLEG00000032459	-	81	53.333	Nomascus_leucogenys
ENSACIG00000023083	slirp	87	52.273	ENSODEG00000012580	SLIRP	76	57.143	Octodon_degus
ENSACIG00000023083	slirp	98	87.879	ENSONIG00000011692	slirp	100	87.879	Oreochromis_niloticus
ENSACIG00000023083	slirp	74	62.667	ENSOANG00000022366	SLIRP	68	62.667	Ornithorhynchus_anatinus
ENSACIG00000023083	slirp	97	81.633	ENSORLG00000010761	slirp	76	81.633	Oryzias_latipes
ENSACIG00000023083	slirp	97	80.612	ENSORLG00020022188	slirp	98	80.612	Oryzias_latipes_hni
ENSACIG00000023083	slirp	100	79.208	ENSORLG00015020171	slirp	100	79.208	Oryzias_latipes_hsok
ENSACIG00000023083	slirp	97	82.653	ENSOMEG00000019321	slirp	98	82.653	Oryzias_melastigma
ENSACIG00000023083	slirp	83	57.143	ENSPPAG00000040710	-	76	57.143	Pan_paniscus
ENSACIG00000023083	slirp	78	54.430	ENSPPRG00000014350	SLIRP	81	54.430	Panthera_pardus
ENSACIG00000023083	slirp	78	54.430	ENSPTIG00000014196	SLIRP	81	54.430	Panthera_tigris_altaica
ENSACIG00000023083	slirp	83	55.952	ENSPTRG00000030691	SLIRP	78	55.952	Pan_troglodytes
ENSACIG00000023083	slirp	73	59.459	ENSPANG00000026323	SLIRP	72	61.194	Papio_anubis
ENSACIG00000023083	slirp	65	68.182	ENSPKIG00000008831	slirp	65	68.182	Paramormyrops_kingsleyae
ENSACIG00000023083	slirp	77	82.051	ENSPMGG00000010541	slirp	90	82.051	Periophthalmus_magnuspinnatus
ENSACIG00000023083	slirp	71	54.167	ENSPEMG00000013234	Slirp	69	52.857	Peromyscus_maniculatus_bairdii
ENSACIG00000023083	slirp	78	55.696	ENSPMAG00000009355	slirp	88	55.696	Petromyzon_marinus
ENSACIG00000023083	slirp	77	52.564	ENSPCIG00000026842	-	84	52.564	Phascolarctos_cinereus
ENSACIG00000023083	slirp	96	75.258	ENSPFOG00000006758	slirp	97	75.258	Poecilia_formosa
ENSACIG00000023083	slirp	96	76.289	ENSPLAG00000011140	slirp	97	76.289	Poecilia_latipinna
ENSACIG00000023083	slirp	96	75.258	ENSPMEG00000019535	slirp	97	75.258	Poecilia_mexicana
ENSACIG00000023083	slirp	96	75.258	ENSPREG00000011673	slirp	97	75.258	Poecilia_reticulata
ENSACIG00000023083	slirp	82	57.831	ENSPPYG00000006030	SLIRP	69	60.000	Pongo_abelii
ENSACIG00000023083	slirp	99	45.000	ENSPCOG00000015159	SLIRP	92	45.000	Propithecus_coquereli
ENSACIG00000023083	slirp	95	78.125	ENSPNAG00000008633	slirp	97	78.125	Pygocentrus_nattereri
ENSACIG00000023083	slirp	87	54.545	ENSRBIG00000032222	-	81	54.545	Rhinopithecus_bieti
ENSACIG00000023083	slirp	66	59.701	ENSRBIG00000032998	-	62	59.701	Rhinopithecus_bieti
ENSACIG00000023083	slirp	82	53.012	ENSRBIG00000035817	-	76	53.012	Rhinopithecus_bieti
ENSACIG00000023083	slirp	64	60.000	ENSRBIG00000031396	-	65	60.000	Rhinopithecus_bieti
ENSACIG00000023083	slirp	64	61.538	ENSRROG00000035604	-	65	61.538	Rhinopithecus_roxellana
ENSACIG00000023083	slirp	87	54.545	ENSRROG00000036656	-	81	54.545	Rhinopithecus_roxellana
ENSACIG00000023083	slirp	66	61.194	ENSRROG00000017133	-	70	61.194	Rhinopithecus_roxellana
ENSACIG00000023083	slirp	70	61.972	ENSRROG00000041312	-	70	61.972	Rhinopithecus_roxellana
ENSACIG00000023083	slirp	80	53.086	ENSSBOG00000020014	SLIRP	78	56.000	Saimiri_boliviensis_boliviensis
ENSACIG00000023083	slirp	84	65.882	ENSSFOG00015011165	slirp	86	65.882	Scleropages_formosus
ENSACIG00000023083	slirp	97	55.000	ENSSMAG00000012930	slirp	98	55.000	Scophthalmus_maximus
ENSACIG00000023083	slirp	97	78.571	ENSSDUG00000021883	slirp	64	78.571	Seriola_dumerili
ENSACIG00000023083	slirp	97	78.571	ENSSLDG00000023136	slirp	89	78.571	Seriola_lalandi_dorsalis
ENSACIG00000023083	slirp	76	67.532	ENSSPUG00000009346	SLIRP	79	67.532	Sphenodon_punctatus
ENSACIG00000023083	slirp	97	65.306	ENSSPAG00000013477	slirp	98	65.306	Stegastes_partitus
ENSACIG00000023083	slirp	99	46.847	ENSSSCG00000028167	SLIRP	100	46.847	Sus_scrofa
ENSACIG00000023083	slirp	77	61.538	ENSTGUG00000012337	SLIRP	87	55.435	Taeniopygia_guttata
ENSACIG00000023083	slirp	95	72.165	ENSTRUG00000020127	slirp	96	72.165	Takifugu_rubripes
ENSACIG00000023083	slirp	99	52.427	ENSUAMG00000022445	SLIRP	92	52.427	Ursus_americanus
ENSACIG00000023083	slirp	99	51.456	ENSUMAG00000007166	SLIRP	92	51.456	Ursus_maritimus
ENSACIG00000023083	slirp	85	50.575	ENSVPAG00000001781	SLIRP	81	50.575	Vicugna_pacos
ENSACIG00000023083	slirp	85	53.933	ENSVVUG00000004436	SLIRP	79	53.933	Vulpes_vulpes
ENSACIG00000023083	slirp	78	73.418	ENSXETG00000030343	SLIRP	89	73.418	Xenopus_tropicalis
ENSACIG00000023083	slirp	97	74.490	ENSXCOG00000009422	slirp	98	74.490	Xiphophorus_couchianus
ENSACIG00000023083	slirp	97	76.531	ENSXMAG00000015655	slirp	98	76.531	Xiphophorus_maculatus