EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000023163 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 5510 bases
Position: chrCCOE01000364.1:700233-705742
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000029925	RRM_1	PF00076.22	1.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000030710	-	264	-	ENSACIP00000029925	87 (aa)	-	-

Gene Model

Click here to download ENSACIG00000023163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000023163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000023163	-	91	33.333	ENSACIG00000012502	-	69	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000023163	-	99	62.069	ENSG00000106344	RBM28	58	43.802	Homo_sapiens
ENSACIG00000023163	-	86	67.105	ENSAMXG00000043026	-	78	67.105	Astyanax_mexicanus
ENSACIG00000023163	-	99	62.069	ENSDORG00000028147	-	65	62.069	Dipodomys_ordii
ENSACIG00000023163	-	67	84.746	ENSFHEG00000007895	-	62	84.746	Fundulus_heteroclitus
ENSACIG00000023163	-	87	83.117	ENSGAFG00000004817	-	85	83.117	Gambusia_affinis
ENSACIG00000023163	-	83	72.603	ENSIPUG00000007127	-	74	72.603	Ictalurus_punctatus
ENSACIG00000023163	-	87	74.026	ENSMMOG00000008605	-	63	74.026	Mola_mola
ENSACIG00000023163	-	87	94.737	ENSNBRG00000022844	-	77	94.737	Neolamprologus_brichardi
ENSACIG00000023163	-	87	64.935	ENSPNAG00000022784	-	80	64.935	Pygocentrus_nattereri
ENSACIG00000023163	-	87	72.727	ENSSMAG00000003917	-	70	72.727	Scophthalmus_maximus
ENSACIG00000023163	-	87	72.727	ENSSDUG00000014292	-	76	72.727	Seriola_dumerili
ENSACIG00000023163	-	87	82.895	ENSXCOG00000020358	-	84	82.895	Xiphophorus_couchianus