EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000023205 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 3573 bases
Position: chrCCOE01002001.1:26563-30135
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000029989	MMR_HSR1	PF01926.23	3.2e-05	1	1
ENSACIP00000029994	MMR_HSR1	PF01926.23	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000030775	-	897	-	ENSACIP00000029989	298 (aa)	-	-
ENSACIT00000030780	-	906	-	ENSACIP00000029994	301 (aa)	-	-

Gene Model

Click here to download ENSACIG00000023205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000023205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000023205	-	96	92.657	ENSACIG00000009430	-	85	92.537
ENSACIG00000023205	-	96	51.220	ENSACIG00000018021	zgc:153654	65	51.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000023205	-	96	82.927	ENSAPOG00000011126	-	60	82.927	Acanthochromis_polyacanthus
ENSACIG00000023205	-	96	52.083	ENSAPOG00000000010	zgc:153654	63	52.083	Acanthochromis_polyacanthus
ENSACIG00000023205	-	96	53.103	ENSAOCG00000011919	zgc:153654	61	53.103	Amphiprion_ocellaris
ENSACIG00000023205	-	96	84.321	ENSAOCG00000008818	si:ch211-197g15.10	64	84.321	Amphiprion_ocellaris
ENSACIG00000023205	-	96	83.624	ENSAPEG00000006547	si:ch211-197g15.10	64	83.624	Amphiprion_percula
ENSACIG00000023205	-	96	52.431	ENSAPEG00000012978	zgc:153654	61	52.431	Amphiprion_percula
ENSACIG00000023205	-	96	73.427	ENSATEG00000016818	-	63	73.427	Anabas_testudineus
ENSACIG00000023205	-	96	83.275	ENSATEG00000016811	-	64	83.275	Anabas_testudineus
ENSACIG00000023205	-	96	75.175	ENSATEG00000016831	-	63	75.175	Anabas_testudineus
ENSACIG00000023205	-	96	77.972	ENSATEG00000016836	-	64	77.972	Anabas_testudineus
ENSACIG00000023205	-	96	56.098	ENSATEG00000008195	zgc:153654	63	56.098	Anabas_testudineus
ENSACIG00000023205	-	96	52.962	ENSACLG00000009420	zgc:153654	94	49.451	Astatotilapia_calliptera
ENSACIG00000023205	-	98	87.671	ENSACLG00000021969	-	96	87.671	Astatotilapia_calliptera
ENSACIG00000023205	-	96	88.502	ENSACLG00000022167	-	64	88.502	Astatotilapia_calliptera
ENSACIG00000023205	-	96	87.762	ENSACLG00000013499	-	64	87.762	Astatotilapia_calliptera
ENSACIG00000023205	-	96	87.762	ENSACLG00000022141	-	63	87.762	Astatotilapia_calliptera
ENSACIG00000023205	-	96	54.483	ENSAMXG00000002119	-	65	54.483	Astyanax_mexicanus
ENSACIG00000023205	-	96	58.763	ENSAMXG00000031541	-	65	58.763	Astyanax_mexicanus
ENSACIG00000023205	-	96	52.397	ENSCPBG00000016962	-	65	53.767	Chrysemys_picta_bellii
ENSACIG00000023205	-	96	71.972	ENSCVAG00000010378	-	64	71.972	Cyprinodon_variegatus
ENSACIG00000023205	-	63	71.277	ENSCVAG00000004989	-	57	71.277	Cyprinodon_variegatus
ENSACIG00000023205	-	96	77.622	ENSCVAG00000015674	-	64	77.622	Cyprinodon_variegatus
ENSACIG00000023205	-	96	77.972	ENSCVAG00000000409	-	61	77.972	Cyprinodon_variegatus
ENSACIG00000023205	-	96	79.720	ENSCVAG00000000405	-	63	79.720	Cyprinodon_variegatus
ENSACIG00000023205	-	98	51.020	ENSCVAG00000013437	zgc:153654	62	51.020	Cyprinodon_variegatus
ENSACIG00000023205	-	96	54.861	ENSDARG00000060322	zgc:153654	64	54.861	Danio_rerio
ENSACIG00000023205	-	96	53.082	ENSDARG00000002293	si:ch211-197g15.6	79	53.082	Danio_rerio
ENSACIG00000023205	-	63	49.741	ENSDARG00000094747	si:ch211-197g15.6	56	49.741	Danio_rerio
ENSACIG00000023205	-	97	50.680	ENSDARG00000094984	si:ch211-197g15.8	66	50.680	Danio_rerio
ENSACIG00000023205	-	96	51.195	ENSDARG00000071355	si:ch211-197g15.7	59	51.195	Danio_rerio
ENSACIG00000023205	-	96	51.736	ENSDARG00000092883	si:dkey-193b15.5	64	51.736	Danio_rerio
ENSACIG00000023205	-	96	56.446	ENSDARG00000009673	si:ch211-197g15.6	59	56.446	Danio_rerio
ENSACIG00000023205	-	96	51.485	ENSDARG00000071361	si:ch211-197g15.10	64	51.485	Danio_rerio
ENSACIG00000023205	-	96	52.941	ENSELUG00000008265	zgc:153654	64	52.941	Esox_lucius
ENSACIG00000023205	-	96	65.972	ENSELUG00000013242	si:ch211-197g15.10	65	65.972	Esox_lucius
ENSACIG00000023205	-	96	55.017	ENSFHEG00000009844	zgc:153654	63	55.017	Fundulus_heteroclitus
ENSACIG00000023205	-	96	77.700	ENSFHEG00000013876	-	64	76.125	Fundulus_heteroclitus
ENSACIG00000023205	-	96	79.094	ENSFHEG00000019903	-	64	79.094	Fundulus_heteroclitus
ENSACIG00000023205	-	80	48.000	ENSGMOG00000012872	-	63	47.809	Gadus_morhua
ENSACIG00000023205	-	96	67.483	ENSGAFG00000007761	-	64	67.483	Gambusia_affinis
ENSACIG00000023205	-	96	56.747	ENSGAFG00000019143	zgc:153654	60	56.747	Gambusia_affinis
ENSACIG00000023205	-	96	73.077	ENSGACG00000007958	si:ch211-197g15.10	64	73.077	Gasterosteus_aculeatus
ENSACIG00000023205	-	96	52.759	ENSGACG00000009755	zgc:153654	63	52.759	Gasterosteus_aculeatus
ENSACIG00000023205	-	96	52.055	ENSGAGG00000022623	-	65	53.425	Gopherus_agassizii
ENSACIG00000023205	-	96	52.778	ENSHBUG00000008124	zgc:153654	61	52.778	Haplochromis_burtoni
ENSACIG00000023205	-	96	87.413	ENSHBUG00000018097	-	64	87.413	Haplochromis_burtoni
ENSACIG00000023205	-	96	88.112	ENSHBUG00000001391	-	64	88.112	Haplochromis_burtoni
ENSACIG00000023205	-	96	55.517	ENSIPUG00000014380	zgc:153654	65	55.517	Ictalurus_punctatus
ENSACIG00000023205	-	95	51.667	ENSIPUG00000025096	si:ch211-197g15.6	63	51.667	Ictalurus_punctatus
ENSACIG00000023205	-	95	57.193	ENSKMAG00000013818	zgc:153654	61	57.193	Kryptolebias_marmoratus
ENSACIG00000023205	-	94	77.936	ENSKMAG00000004691	si:ch211-197g15.10	67	77.936	Kryptolebias_marmoratus
ENSACIG00000023205	-	96	73.077	ENSLBEG00000027620	si:ch211-197g15.10	63	73.077	Labrus_bergylta
ENSACIG00000023205	-	96	77.003	ENSMAMG00000006527	-	97	77.003	Mastacembelus_armatus
ENSACIG00000023205	-	96	80.420	ENSMAMG00000006432	-	64	80.420	Mastacembelus_armatus
ENSACIG00000023205	-	96	54.325	ENSMAMG00000002775	zgc:153654	61	54.325	Mastacembelus_armatus
ENSACIG00000023205	-	96	76.307	ENSMAMG00000006478	-	65	76.325	Mastacembelus_armatus
ENSACIG00000023205	-	96	86.014	ENSMZEG00005016298	-	63	86.014	Maylandia_zebra
ENSACIG00000023205	-	96	52.431	ENSMZEG00005000213	zgc:153654	61	52.431	Maylandia_zebra
ENSACIG00000023205	-	98	87.671	ENSMZEG00005016191	-	96	87.671	Maylandia_zebra
ENSACIG00000023205	-	96	87.762	ENSMZEG00005009847	-	60	87.762	Maylandia_zebra
ENSACIG00000023205	-	96	86.316	ENSMZEG00005016305	-	94	89.209	Maylandia_zebra
ENSACIG00000023205	-	96	52.759	ENSMMOG00000008706	zgc:153654	62	52.759	Mola_mola
ENSACIG00000023205	-	96	81.119	ENSMALG00000017812	-	64	81.119	Monopterus_albus
ENSACIG00000023205	-	96	47.387	ENSMALG00000010184	zgc:153654	61	47.387	Monopterus_albus
ENSACIG00000023205	-	96	87.108	ENSNBRG00000021454	-	64	87.108	Neolamprologus_brichardi
ENSACIG00000023205	-	96	82.927	ENSNBRG00000021612	-	65	82.474	Neolamprologus_brichardi
ENSACIG00000023205	-	96	82.867	ENSNBRG00000022795	-	64	82.867	Neolamprologus_brichardi
ENSACIG00000023205	-	96	84.321	ENSNBRG00000021762	-	65	84.321	Neolamprologus_brichardi
ENSACIG00000023205	-	96	52.778	ENSNBRG00000021369	zgc:153654	61	52.778	Neolamprologus_brichardi
ENSACIG00000023205	-	96	91.259	ENSNBRG00000021865	-	90	92.336	Neolamprologus_brichardi
ENSACIG00000023205	-	96	86.713	ENSONIG00000014147	-	64	86.713	Oreochromis_niloticus
ENSACIG00000023205	-	96	53.125	ENSONIG00000001120	zgc:153654	61	53.125	Oreochromis_niloticus
ENSACIG00000023205	-	96	85.517	ENSONIG00000012749	-	61	85.517	Oreochromis_niloticus
ENSACIG00000023205	-	96	64.286	ENSORLG00000027011	-	66	64.286	Oryzias_latipes
ENSACIG00000023205	-	96	78.671	ENSORLG00000008608	-	64	78.671	Oryzias_latipes
ENSACIG00000023205	-	96	66.327	ENSORLG00000030184	-	66	66.327	Oryzias_latipes
ENSACIG00000023205	-	96	76.224	ENSORLG00000000696	-	64	76.224	Oryzias_latipes
ENSACIG00000023205	-	96	64.966	ENSORLG00020014470	-	66	64.966	Oryzias_latipes_hni
ENSACIG00000023205	-	96	79.720	ENSORLG00020014451	-	64	79.720	Oryzias_latipes_hni
ENSACIG00000023205	-	98	64.026	ENSORLG00020014413	-	98	64.026	Oryzias_latipes_hni
ENSACIG00000023205	-	96	77.972	ENSORLG00015000293	-	64	77.972	Oryzias_latipes_hsok
ENSACIG00000023205	-	96	66.327	ENSORLG00015009930	-	66	66.327	Oryzias_latipes_hsok
ENSACIG00000023205	-	96	75.874	ENSORLG00015015397	-	63	75.874	Oryzias_latipes_hsok
ENSACIG00000023205	-	97	79.167	ENSORLG00015009849	-	97	79.167	Oryzias_latipes_hsok
ENSACIG00000023205	-	96	77.972	ENSORLG00015009699	-	64	77.972	Oryzias_latipes_hsok
ENSACIG00000023205	-	96	59.797	ENSOMEG00000004075	-	67	59.459	Oryzias_melastigma
ENSACIG00000023205	-	96	82.168	ENSOMEG00000004183	-	64	82.168	Oryzias_melastigma
ENSACIG00000023205	-	96	50.968	ENSOMEG00000004053	-	65	50.814	Oryzias_melastigma
ENSACIG00000023205	-	96	64.068	ENSOMEG00000003965	-	66	64.068	Oryzias_melastigma
ENSACIG00000023205	-	96	62.162	ENSOMEG00000004005	-	67	62.162	Oryzias_melastigma
ENSACIG00000023205	-	96	82.168	ENSOMEG00000004201	-	64	82.168	Oryzias_melastigma
ENSACIG00000023205	-	96	75.175	ENSOMEG00000000087	-	64	75.175	Oryzias_melastigma
ENSACIG00000023205	-	96	59.864	ENSOMEG00000003940	-	75	59.864	Oryzias_melastigma
ENSACIG00000023205	-	96	69.937	ENSOMEG00000003837	-	64	71.519	Oryzias_melastigma
ENSACIG00000023205	-	96	65.085	ENSOMEG00000004019	-	64	65.085	Oryzias_melastigma
ENSACIG00000023205	-	96	48.973	ENSPSIG00000002607	-	63	48.973	Pelodiscus_sinensis
ENSACIG00000023205	-	96	46.207	ENSPMGG00000000928	zgc:153654	90	46.897	Periophthalmus_magnuspinnatus
ENSACIG00000023205	-	96	43.960	ENSPMAG00000000471	-	66	43.960	Petromyzon_marinus
ENSACIG00000023205	-	96	54.608	ENSPFOG00000014250	zgc:153654	64	54.608	Poecilia_formosa
ENSACIG00000023205	-	96	75.862	ENSPFOG00000022999	-	66	75.862	Poecilia_formosa
ENSACIG00000023205	-	96	66.667	ENSPFOG00000011182	-	64	66.667	Poecilia_formosa
ENSACIG00000023205	-	96	76.307	ENSPFOG00000000111	-	64	76.307	Poecilia_formosa
ENSACIG00000023205	-	96	75.172	ENSPLAG00000001304	-	65	75.172	Poecilia_latipinna
ENSACIG00000023205	-	96	75.958	ENSPLAG00000001307	-	64	75.958	Poecilia_latipinna
ENSACIG00000023205	-	96	67.483	ENSPLAG00000021480	-	64	67.483	Poecilia_latipinna
ENSACIG00000023205	-	96	55.208	ENSPLAG00000007998	zgc:153654	61	55.208	Poecilia_latipinna
ENSACIG00000023205	-	96	68.182	ENSPMEG00000006889	-	64	68.182	Poecilia_mexicana
ENSACIG00000023205	-	96	76.655	ENSPMEG00000013357	-	64	76.655	Poecilia_mexicana
ENSACIG00000023205	-	96	77.003	ENSPMEG00000013339	-	97	77.003	Poecilia_mexicana
ENSACIG00000023205	-	96	55.363	ENSPMEG00000003409	zgc:153654	61	55.363	Poecilia_mexicana
ENSACIG00000023205	-	96	55.017	ENSPREG00000010723	zgc:153654	61	55.017	Poecilia_reticulata
ENSACIG00000023205	-	96	67.133	ENSPREG00000009457	-	64	67.133	Poecilia_reticulata
ENSACIG00000023205	-	96	74.913	ENSPREG00000011892	-	63	74.913	Poecilia_reticulata
ENSACIG00000023205	-	98	88.014	ENSPNYG00000016375	-	96	88.014	Pundamilia_nyererei
ENSACIG00000023205	-	96	87.762	ENSPNYG00000014740	-	64	87.762	Pundamilia_nyererei
ENSACIG00000023205	-	96	52.613	ENSPNYG00000013106	zgc:153654	94	49.084	Pundamilia_nyererei
ENSACIG00000023205	-	96	56.552	ENSPNAG00000013999	zgc:153654	66	56.552	Pygocentrus_nattereri
ENSACIG00000023205	-	96	86.411	ENSSDUG00000009840	-	65	86.411	Seriola_dumerili
ENSACIG00000023205	-	94	84.946	ENSSDUG00000009870	-	94	84.946	Seriola_dumerili
ENSACIG00000023205	-	96	53.472	ENSSDUG00000012708	zgc:153654	61	53.472	Seriola_dumerili
ENSACIG00000023205	-	96	53.472	ENSSLDG00000022597	zgc:153654	61	53.472	Seriola_lalandi_dorsalis
ENSACIG00000023205	-	96	80.836	ENSSLDG00000001629	-	89	80.075	Seriola_lalandi_dorsalis
ENSACIG00000023205	-	95	86.525	ENSSLDG00000001591	-	81	86.525	Seriola_lalandi_dorsalis
ENSACIG00000023205	-	96	50.342	ENSSPUG00000010680	-	67	50.342	Sphenodon_punctatus
ENSACIG00000023205	-	96	50.347	ENSSPAG00000018073	zgc:153654	62	50.347	Stegastes_partitus
ENSACIG00000023205	-	95	80.986	ENSSPAG00000005921	-	95	80.986	Stegastes_partitus
ENSACIG00000023205	-	87	51.527	ENSTRUG00000016083	-	53	51.527	Takifugu_rubripes
ENSACIG00000023205	-	93	52.158	ENSTNIG00000017187	zgc:153654	98	52.158	Tetraodon_nigroviridis
ENSACIG00000023205	-	96	53.559	ENSXCOG00000014178	zgc:153654	62	53.559	Xiphophorus_couchianus
ENSACIG00000023205	-	96	75.610	ENSXCOG00000006325	-	65	75.610	Xiphophorus_couchianus
ENSACIG00000023205	-	96	67.133	ENSXCOG00000008734	-	64	67.133	Xiphophorus_couchianus
ENSACIG00000023205	-	96	66.783	ENSXMAG00000002325	-	64	66.783	Xiphophorus_maculatus
ENSACIG00000023205	-	96	55.208	ENSXMAG00000010193	zgc:153654	61	55.208	Xiphophorus_maculatus
ENSACIG00000023205	-	96	77.003	ENSXMAG00000002467	-	64	77.003	Xiphophorus_maculatus