EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000023343 (Gene tree)
Gene ID
-
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein%2C cytoplasmic 4 (inducible form)
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Minus strand
Length
9690 bases
Position
chrCCOE01001306.1:140165-149854
Accession
ZDB-GENE-030131-9663
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000030167PABPPF00658.186.2e-3111
ENSACIP00000030167RRM_5PF13893.63.6e-0911
ENSACIP00000030167RRM_1PF00076.225.3e-9014
ENSACIP00000030167RRM_1PF00076.225.3e-9024
ENSACIP00000030167RRM_1PF00076.225.3e-9034
ENSACIP00000030167RRM_1PF00076.225.3e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000030959-1896-ENSACIP00000030167631 (aa)--
Gene Model
Click here to download ENSACIG00000023343's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000023343's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000023343pabpc49866.773ENSACIG00000021004-10073.723
ENSACIG00000023343pabpc49876.752ENSACIG00000004685pabpc1a9876.592
ENSACIG00000023343pabpc46330.220ENSACIG00000014376-7630.220
ENSACIG00000023343pabpc45837.500ENSACIG00000023843celf16137.500
ENSACIG00000023343pabpc46033.010ENSACIG00000021113RBMS36733.010
ENSACIG00000023343pabpc46039.744ENSACIG00000021116rbm39b7837.349
ENSACIG00000023343pabpc45441.429ENSACIG00000016186rbms2b7241.429
ENSACIG00000023343pabpc45238.636ENSACIG00000019405-5939.535
ENSACIG00000023343pabpc45830.189ENSACIG00000003734tial18730.189
ENSACIG00000023343pabpc49875.399ENSACIG00000018366pabpc1b9975.399
ENSACIG00000023343pabpc45740.437ENSACIG00000018455sf3b45340.437
ENSACIG00000023343pabpc45934.940ENSACIG00000008793elavl48934.940
ENSACIG00000023343pabpc45936.145ENSACIG00000010855ELAVL210036.145
ENSACIG00000023343pabpc45237.500ENSACIG00000004318-5537.500
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000023343pabpc410084.810ENSG00000090621PABPC49996.396Homo_sapiens
ENSACIG00000023343pabpc410096.355ENSAPOG00000001161pabpc410096.355Acanthochromis_polyacanthus
ENSACIG00000023343pabpc49749.440ENSAMEG00000015083-9848.800Ailuropoda_melanoleuca
ENSACIG00000023343pabpc410080.419ENSAMEG00000011535-10079.821Ailuropoda_melanoleuca
ENSACIG00000023343pabpc410096.355ENSAOCG00000021529pabpc410096.355Amphiprion_ocellaris
ENSACIG00000023343pabpc410096.355ENSAPEG00000019196pabpc410096.355Amphiprion_percula
ENSACIG00000023343pabpc410096.519ENSATEG00000007402pabpc410096.519Anabas_testudineus
ENSACIG00000023343pabpc49986.142ENSAPLG00000009729-10085.512Anas_platyrhynchos
ENSACIG00000023343pabpc49885.284ENSACAG00000002544PABPC410084.574Anolis_carolinensis
ENSACIG00000023343pabpc410084.062ENSANAG00000025079PABPC410083.438Aotus_nancymaae
ENSACIG00000023343pabpc410097.943ENSACLG00000019558pabpc410097.943Astatotilapia_calliptera
ENSACIG00000023343pabpc49987.163ENSAMXG00000018779pabpc49987.163Astyanax_mexicanus
ENSACIG00000023343pabpc45784.431ENSBTAG00000048536-9384.431Bos_taurus
ENSACIG00000023343pabpc410081.804ENSBTAG00000017125PABPC410081.804Bos_taurus
ENSACIG00000023343pabpc47381.900ENSCJAG00000045953-8480.090Callithrix_jacchus
ENSACIG00000023343pabpc410084.062ENSCJAG00000002512-10083.438Callithrix_jacchus
ENSACIG00000023343pabpc410084.219ENSCAFG00000003081PABPC410083.594Canis_familiaris
ENSACIG00000023343pabpc410080.568ENSCAFG00020004161PABPC410079.970Canis_lupus_dingo
ENSACIG00000023343pabpc410080.568ENSCHIG00000019398-10079.970Capra_hircus
ENSACIG00000023343pabpc410065.997ENSCHIG00000023385-10065.533Capra_hircus
ENSACIG00000023343pabpc410084.219ENSTSYG00000006532PABPC410083.594Carlito_syrichta
ENSACIG00000023343pabpc49983.148ENSCAPG00000015984PABPC410082.381Cavia_aperea
ENSACIG00000023343pabpc410082.615ENSCPOG00000009552PABPC410083.594Cavia_porcellus
ENSACIG00000023343pabpc410083.906ENSCCAG00000037306PABPC410083.281Cebus_capucinus
ENSACIG00000023343pabpc410084.219ENSCATG00000042164PABPC410083.594Cercocebus_atys
ENSACIG00000023343pabpc410082.462ENSCLAG00000011899PABPC410083.594Chinchilla_lanigera
ENSACIG00000023343pabpc410081.016ENSCSAG00000001135PABPC410080.419Chlorocebus_sabaeus
ENSACIG00000023343pabpc48689.474ENSCHOG00000005327PABPC47990.027Choloepus_hoffmanni
ENSACIG00000023343pabpc49986.929ENSCPBG00000001038PABPC410086.299Chrysemys_picta_bellii
ENSACIG00000023343pabpc49984.469ENSCANG00000034177PABPC410083.835Colobus_angolensis_palliatus
ENSACIG00000023343pabpc49885.299ENSCGRG00001018166Pabpc410084.335Cricetulus_griseus_chok1gshd
ENSACIG00000023343pabpc49785.574ENSCGRG00000009777Pabpc410084.591Cricetulus_griseus_crigri
ENSACIG00000023343pabpc410094.937ENSCSEG00000000130pabpc410094.937Cynoglossus_semilaevis
ENSACIG00000023343pabpc49995.652ENSCVAG00000019246pabpc410095.652Cyprinodon_variegatus
ENSACIG00000023343pabpc49892.982ENSDARG00000059259pabpc410092.727Danio_rerio
ENSACIG00000023343pabpc49983.304ENSDNOG00000018444-10082.601Dasypus_novemcinctus
ENSACIG00000023343pabpc410081.832ENSDORG00000011581Pabpc410081.930Dipodomys_ordii
ENSACIG00000023343pabpc410090.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSACIG00000023343pabpc48554.495ENSETEG00000009172-9953.237Echinops_telfairi
ENSACIG00000023343pabpc49776.911ENSEBUG00000013782pabpc49976.274Eptatretus_burgeri
ENSACIG00000023343pabpc49976.190ENSEBUG00000000992pabpc410075.873Eptatretus_burgeri
ENSACIG00000023343pabpc410080.717ENSEASG00005014119PABPC410080.120Equus_asinus_asinus
ENSACIG00000023343pabpc410080.717ENSECAG00000009396PABPC410080.120Equus_caballus
ENSACIG00000023343pabpc49779.908ENSEEUG00000002962PABPC410078.774Erinaceus_europaeus
ENSACIG00000023343pabpc49892.994ENSELUG00000003195pabpc410092.175Esox_lucius
ENSACIG00000023343pabpc410084.219ENSFCAG00000015254-10083.594Felis_catus
ENSACIG00000023343pabpc49986.593ENSFALG00000000543PABPC410085.962Ficedula_albicollis
ENSACIG00000023343pabpc410080.120ENSFDAG00000020016-10080.269Fukomys_damarensis
ENSACIG00000023343pabpc48852.654ENSFDAG00000010581-9950.345Fukomys_damarensis
ENSACIG00000023343pabpc49995.721ENSFHEG00000007548pabpc410095.721Fundulus_heteroclitus
ENSACIG00000023343pabpc410091.366ENSGMOG00000019025pabpc410091.366Gadus_morhua
ENSACIG00000023343pabpc49987.244ENSGALG00000003800PABPC410086.614Gallus_gallus
ENSACIG00000023343pabpc49997.847ENSGAFG00000018195pabpc410097.847Gambusia_affinis
ENSACIG00000023343pabpc410093.829ENSGACG00000007179pabpc410093.829Gasterosteus_aculeatus
ENSACIG00000023343pabpc49986.929ENSGAGG00000001888PABPC410086.299Gopherus_agassizii
ENSACIG00000023343pabpc410084.062ENSGGOG00000004002PABPC410083.438Gorilla_gorilla
ENSACIG00000023343pabpc410097.785ENSHBUG00000020206pabpc410097.785Haplochromis_burtoni
ENSACIG00000023343pabpc410082.462ENSHGLG00000011162PABPC410083.438Heterocephalus_glaber_female
ENSACIG00000023343pabpc410082.462ENSHGLG00100001580PABPC410083.438Heterocephalus_glaber_male
ENSACIG00000023343pabpc410094.146ENSHCOG00000012694pabpc410095.095Hippocampus_comes
ENSACIG00000023343pabpc49793.065ENSIPUG00000016620pabpc410092.271Ictalurus_punctatus
ENSACIG00000023343pabpc410084.810ENSSTOG00000010416PABPC410084.177Ictidomys_tridecemlineatus
ENSACIG00000023343pabpc410080.828ENSJJAG00000007781Pabpc410080.551Jaculus_jaculus
ENSACIG00000023343pabpc410094.471ENSKMAG00000013597pabpc410094.471Kryptolebias_marmoratus
ENSACIG00000023343pabpc410094.953ENSLBEG00000013654pabpc410094.953Labrus_bergylta
ENSACIG00000023343pabpc49987.579ENSLACG00000011907PABPC410087.107Latimeria_chalumnae
ENSACIG00000023343pabpc49992.126ENSLOCG00000001877pabpc410092.126Lepisosteus_oculatus
ENSACIG00000023343pabpc410085.127ENSLAFG00000000151PABPC410084.494Loxodonta_africana
ENSACIG00000023343pabpc410084.219ENSMFAG00000041481PABPC410083.594Macaca_fascicularis
ENSACIG00000023343pabpc410081.016ENSMMUG00000007497PABPC410080.419Macaca_mulatta
ENSACIG00000023343pabpc410084.062ENSMNEG00000043054PABPC410083.438Macaca_nemestrina
ENSACIG00000023343pabpc410084.219ENSMLEG00000040716PABPC410083.594Mandrillus_leucophaeus
ENSACIG00000023343pabpc410096.361ENSMAMG00000010025pabpc410096.361Mastacembelus_armatus
ENSACIG00000023343pabpc410097.785ENSMZEG00005006141pabpc410097.785Maylandia_zebra
ENSACIG00000023343pabpc49884.122ENSMGAG00000005408PABPC410083.446Meleagris_gallopavo
ENSACIG00000023343pabpc45780.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSACIG00000023343pabpc47279.524ENSMAUG00000001295-9778.571Mesocricetus_auratus
ENSACIG00000023343pabpc47690.625ENSMAUG00000019763-8487.156Mesocricetus_auratus
ENSACIG00000023343pabpc49974.645ENSMICG00000036729-10073.582Microcebus_murinus
ENSACIG00000023343pabpc48884.258ENSMICG00000016633-10084.258Microcebus_murinus
ENSACIG00000023343pabpc410083.754ENSMOCG00000006763Pabpc410084.062Microtus_ochrogaster
ENSACIG00000023343pabpc410092.393ENSMMOG00000002363pabpc410090.952Mola_mola
ENSACIG00000023343pabpc45971.467ENSMODG00000018051-9671.467Monodelphis_domestica
ENSACIG00000023343pabpc49784.129ENSMODG00000017657-10082.905Monodelphis_domestica
ENSACIG00000023343pabpc410096.057ENSMALG00000011017pabpc410096.057Monopterus_albus
ENSACIG00000023343pabpc410079.522MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSACIG00000023343pabpc49972.617MGP_CAROLIEiJ_G0024864-10073.158Mus_caroli
ENSACIG00000023343pabpc410084.652ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSACIG00000023343pabpc49980.000MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSACIG00000023343pabpc49970.588MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSACIG00000023343pabpc410080.717ENSMPUG00000014414-10080.120Mustela_putorius_furo
ENSACIG00000023343pabpc49546.546ENSMPUG00000006836-10046.053Mustela_putorius_furo
ENSACIG00000023343pabpc410084.652ENSMLUG00000012068PABPC410084.019Myotis_lucifugus
ENSACIG00000023343pabpc410085.127ENSNGAG00000018292Pabpc410084.494Nannospalax_galili
ENSACIG00000023343pabpc45999.038ENSNBRG00000009708pabpc49899.038Neolamprologus_brichardi
ENSACIG00000023343pabpc46598.795ENSNBRG00000010047-7298.795Neolamprologus_brichardi
ENSACIG00000023343pabpc410084.219ENSNLEG00000011928PABPC410083.594Nomascus_leucogenys
ENSACIG00000023343pabpc48593.651ENSOPRG00000011984PABPC48793.651Ochotona_princeps
ENSACIG00000023343pabpc45382.857ENSODEG00000013457-10082.857Octodon_degus
ENSACIG00000023343pabpc410083.594ENSODEG00000006592-10082.969Octodon_degus
ENSACIG00000023343pabpc49974.327ENSODEG00000017434-10073.499Octodon_degus
ENSACIG00000023343pabpc410097.785ENSONIG00000008176pabpc410097.785Oreochromis_niloticus
ENSACIG00000023343pabpc49986.299ENSOANG00000010001PABPC410085.669Ornithorhynchus_anatinus
ENSACIG00000023343pabpc49581.476ENSOCUG00000000562PABPC48880.848Oryctolagus_cuniculus
ENSACIG00000023343pabpc49996.914ENSORLG00000017479pabpc49996.914Oryzias_latipes
ENSACIG00000023343pabpc49996.914ENSORLG00020018644pabpc410096.914Oryzias_latipes_hni
ENSACIG00000023343pabpc49996.914ENSORLG00015015042pabpc410096.914Oryzias_latipes_hsok
ENSACIG00000023343pabpc410094.945ENSOMEG00000014410pabpc410094.945Oryzias_melastigma
ENSACIG00000023343pabpc410081.707ENSOGAG00000004067PABPC410081.555Otolemur_garnettii
ENSACIG00000023343pabpc410080.568ENSOARG00000020060PABPC410079.970Ovis_aries
ENSACIG00000023343pabpc410084.062ENSPPAG00000043625PABPC410083.438Pan_paniscus
ENSACIG00000023343pabpc410084.219ENSPPRG00000024727PABPC410083.594Panthera_pardus
ENSACIG00000023343pabpc410084.219ENSPTIG00000005829PABPC410083.594Panthera_tigris_altaica
ENSACIG00000023343pabpc410084.062ENSPTRG00000000573PABPC410083.438Pan_troglodytes
ENSACIG00000023343pabpc410084.219ENSPANG00000009484PABPC410083.594Papio_anubis
ENSACIG00000023343pabpc410090.439ENSPKIG00000025356pabpc410090.439Paramormyrops_kingsleyae
ENSACIG00000023343pabpc49987.402ENSPSIG00000016892PABPC410086.772Pelodiscus_sinensis
ENSACIG00000023343pabpc410091.601ENSPMGG00000009073pabpc410090.967Periophthalmus_magnuspinnatus
ENSACIG00000023343pabpc410082.615ENSPEMG00000023569-10083.750Peromyscus_maniculatus_bairdii
ENSACIG00000023343pabpc410079.815ENSPEMG00000024193-10080.124Peromyscus_maniculatus_bairdii
ENSACIG00000023343pabpc48875.261ENSPMAG00000002836pabpc410075.958Petromyzon_marinus
ENSACIG00000023343pabpc49573.389ENSPMAG00000007885pabpc49972.414Petromyzon_marinus
ENSACIG00000023343pabpc49694.062ENSPCIG00000020674PABPC410094.660Phascolarctos_cinereus
ENSACIG00000023343pabpc49995.087ENSPFOG00000002682pabpc410095.087Poecilia_formosa
ENSACIG00000023343pabpc49995.246ENSPLAG00000010112pabpc410095.246Poecilia_latipinna
ENSACIG00000023343pabpc49995.087ENSPMEG00000019739pabpc410095.087Poecilia_mexicana
ENSACIG00000023343pabpc49995.880ENSPREG00000001589pabpc410095.880Poecilia_reticulata
ENSACIG00000023343pabpc410080.867ENSPPYG00000001506PABPC410080.269Pongo_abelii
ENSACIG00000023343pabpc410075.934ENSPCAG00000003341PABPC410075.336Procavia_capensis
ENSACIG00000023343pabpc410082.589ENSPCOG00000023725-10083.463Propithecus_coquereli
ENSACIG00000023343pabpc49969.444ENSPCOG00000025882-9679.091Propithecus_coquereli
ENSACIG00000023343pabpc49979.636ENSPVAG00000002187PABPC410078.974Pteropus_vampyrus
ENSACIG00000023343pabpc410097.943ENSPNYG00000006134pabpc410097.943Pundamilia_nyererei
ENSACIG00000023343pabpc49994.295ENSPNAG00000024355pabpc410094.295Pygocentrus_nattereri
ENSACIG00000023343pabpc410081.679ENSRNOG00000015642Pabpc410081.776Rattus_norvegicus
ENSACIG00000023343pabpc410079.542ENSRNOG00000028592AABR07035074.110079.632Rattus_norvegicus
ENSACIG00000023343pabpc410084.219ENSRBIG00000039761PABPC410083.594Rhinopithecus_bieti
ENSACIG00000023343pabpc410084.219ENSRROG00000033355PABPC410083.594Rhinopithecus_roxellana
ENSACIG00000023343pabpc410083.906ENSSBOG00000026193PABPC410083.281Saimiri_boliviensis_boliviensis
ENSACIG00000023343pabpc49787.480ENSSHAG00000018139PABPC410086.142Sarcophilus_harrisii
ENSACIG00000023343pabpc49991.503ENSSFOG00015023514pabpc410091.503Scleropages_formosus
ENSACIG00000023343pabpc410094.778ENSSMAG00000009007pabpc410094.778Scophthalmus_maximus
ENSACIG00000023343pabpc49996.308ENSSDUG00000012683pabpc410096.044Seriola_dumerili
ENSACIG00000023343pabpc49996.308ENSSLDG00000013025pabpc410096.044Seriola_lalandi_dorsalis
ENSACIG00000023343pabpc410074.439ENSSARG00000000310PABPC410073.842Sorex_araneus
ENSACIG00000023343pabpc49987.440ENSSPUG00000003204PABPC410086.804Sphenodon_punctatus
ENSACIG00000023343pabpc410096.519ENSSPAG00000009252pabpc410096.519Stegastes_partitus
ENSACIG00000023343pabpc410084.219ENSSSCG00000003660-10083.594Sus_scrofa
ENSACIG00000023343pabpc48944.991ENSSSCG00000036170-9644.991Sus_scrofa
ENSACIG00000023343pabpc49981.805ENSTGUG00000001266PABPC410082.105Taeniopygia_guttata
ENSACIG00000023343pabpc410093.829ENSTRUG00000005907pabpc410093.829Takifugu_rubripes
ENSACIG00000023343pabpc410087.658ENSTNIG00000016902pabpc410087.342Tetraodon_nigroviridis
ENSACIG00000023343pabpc49970.033ENSTBEG00000009035PABPC410069.371Tupaia_belangeri
ENSACIG00000023343pabpc49960.245ENSTTRG00000014340PABPC410068.377Tursiops_truncatus
ENSACIG00000023343pabpc410084.219ENSUAMG00000000303PABPC410083.594Ursus_americanus
ENSACIG00000023343pabpc410089.569ENSUMAG00000019585PABPC49991.807Ursus_maritimus
ENSACIG00000023343pabpc47071.429ENSVPAG00000010041PABPC47370.501Vicugna_pacos
ENSACIG00000023343pabpc410084.219ENSVVUG00000005215PABPC410083.594Vulpes_vulpes
ENSACIG00000023343pabpc49983.123ENSXETG00000010946pabpc410082.492Xenopus_tropicalis
ENSACIG00000023343pabpc46796.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSACIG00000023343pabpc49997.625ENSXCOG00000013190pabpc49696.698Xiphophorus_couchianus
ENSACIG00000023343pabpc49995.563ENSXMAG00000019007pabpc410095.563Xiphophorus_maculatus

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