EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000023658 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 4382 bases
Position: chrCCOE01001744.1:2174814-2179195
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000030591	RRM_1	PF00076.22	8.4e-32	1	2
ENSACIP00000030591	RRM_1	PF00076.22	8.4e-32	2	2
ENSACIP00000030591	RRM_3	PF08777.11	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000031388	-	966	-	ENSACIP00000030591	321 (aa)	-	-

Gene Model

Click here to download ENSACIG00000023658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000023658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000023658	-	51	43.275	ENSACIG00000002623	-	85	43.275
ENSACIG00000023658	-	78	56.574	ENSACIG00000018649	srsf4	88	71.545
ENSACIG00000023658	-	56	42.632	ENSACIG00000015765	srsf9	76	42.233
ENSACIG00000023658	-	72	49.789	ENSACIG00000011892	srsf5a	96	60.448
ENSACIG00000023658	-	66	79.724	ENSACIG00000020091	-	93	82.258
ENSACIG00000023658	-	56	65.405	ENSACIG00000010742	srsf5b	81	62.016
ENSACIG00000023658	-	63	39.904	ENSACIG00000008091	srsf1a	69	42.690

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000023658	-	56	87.778	ENSG00000124193	SRSF6	86	68.581	Homo_sapiens
ENSACIG00000023658	-	55	86.517	ENSAOCG00000004309	-	99	62.500	Amphiprion_ocellaris
ENSACIG00000023658	-	85	68.727	ENSAPEG00000020746	-	98	63.907	Amphiprion_percula
ENSACIG00000023658	-	81	93.370	ENSAPEG00000013086	-	99	80.516	Amphiprion_percula
ENSACIG00000023658	-	61	62.712	ENSATEG00000010679	-	90	67.464	Anabas_testudineus
ENSACIG00000023658	-	56	84.358	ENSATEG00000007255	-	93	61.076	Anabas_testudineus
ENSACIG00000023658	-	56	87.151	ENSACAG00000002061	SRSF6	85	69.565	Anolis_carolinensis
ENSACIG00000023658	-	56	87.778	ENSANAG00000024080	SRSF6	86	68.581	Aotus_nancymaae
ENSACIG00000023658	-	56	89.674	ENSAMXG00000003101	-	90	64.809	Astyanax_mexicanus
ENSACIG00000023658	-	56	85.792	ENSAMXG00000042692	-	94	81.061	Astyanax_mexicanus
ENSACIG00000023658	-	56	87.778	ENSBTAG00000008527	SRSF6	86	71.477	Bos_taurus
ENSACIG00000023658	-	55	88.268	ENSCJAG00000048403	SRSF6	66	88.827	Callithrix_jacchus
ENSACIG00000023658	-	56	65.363	ENSTSYG00000026476	SRSF6	84	52.685	Carlito_syrichta
ENSACIG00000023658	-	50	89.506	ENSCPOG00000011761	SRSF6	86	67.368	Cavia_porcellus
ENSACIG00000023658	-	95	57.929	ENSCCAG00000018540	-	93	56.566	Cebus_capucinus
ENSACIG00000023658	-	56	87.778	ENSCCAG00000026018	-	86	68.581	Cebus_capucinus
ENSACIG00000023658	-	56	87.778	ENSCATG00000030794	SRSF6	86	68.581	Cercocebus_atys
ENSACIG00000023658	-	56	87.778	ENSCLAG00000010247	SRSF6	87	68.121	Chinchilla_lanigera
ENSACIG00000023658	-	56	87.778	ENSCSAG00000014022	SRSF6	86	68.581	Chlorocebus_sabaeus
ENSACIG00000023658	-	56	85.792	ENSCPBG00000018200	SRSF6	96	68.955	Chrysemys_picta_bellii
ENSACIG00000023658	-	56	65.363	ENSCANG00000042529	-	84	49.662	Colobus_angolensis_palliatus
ENSACIG00000023658	-	56	86.667	ENSCANG00000037774	-	86	67.905	Colobus_angolensis_palliatus
ENSACIG00000023658	-	56	87.778	ENSCGRG00001022339	Srsf6	87	68.581	Cricetulus_griseus_chok1gshd
ENSACIG00000023658	-	51	59.722	ENSCSEG00000019782	SRSF6	90	55.349	Cynoglossus_semilaevis
ENSACIG00000023658	-	56	88.043	ENSDARG00000016783	srsf6b	75	95.775	Danio_rerio
ENSACIG00000023658	-	55	79.775	ENSDARG00000013729	srsf6a	90	58.235	Danio_rerio
ENSACIG00000023658	-	56	87.778	ENSDNOG00000008410	SRSF6	86	68.456	Dasypus_novemcinctus
ENSACIG00000023658	-	56	87.778	ENSDORG00000028378	Srsf6	87	68.121	Dipodomys_ordii
ENSACIG00000023658	-	56	86.034	ENSETEG00000006221	SRSF6	90	63.987	Echinops_telfairi
ENSACIG00000023658	-	69	75.113	ENSEASG00005023429	SRSF6	97	62.353	Equus_asinus_asinus
ENSACIG00000023658	-	69	75.113	ENSECAG00000023932	SRSF6	97	62.353	Equus_caballus
ENSACIG00000023658	-	91	77.474	ENSELUG00000013506	SRSF6	91	78.521	Esox_lucius
ENSACIG00000023658	-	56	86.339	ENSELUG00000024182	SRSF6	88	82.500	Esox_lucius
ENSACIG00000023658	-	56	65.363	ENSFDAG00000012191	SRSF6	85	49.329	Fukomys_damarensis
ENSACIG00000023658	-	91	85.484	ENSFHEG00000023065	srsf6a	92	85.761	Fundulus_heteroclitus
ENSACIG00000023658	-	79	85.876	ENSGMOG00000014458	srsf6a	92	60.807	Gadus_morhua
ENSACIG00000023658	-	55	74.857	ENSGMOG00000006105	srsf6a	61	73.143	Gadus_morhua
ENSACIG00000023658	-	56	88.587	ENSGALG00000000990	SRSF6	97	65.487	Gallus_gallus
ENSACIG00000023658	-	52	58.482	ENSGAFG00000019087	srsf6a	91	66.368	Gambusia_affinis
ENSACIG00000023658	-	91	71.429	ENSGACG00000006084	srsf6a	94	70.435	Gasterosteus_aculeatus
ENSACIG00000023658	-	56	85.792	ENSGAGG00000003238	SRSF6	96	68.955	Gopherus_agassizii
ENSACIG00000023658	-	56	87.778	ENSGGOG00000009808	SRSF6	86	68.581	Gorilla_gorilla
ENSACIG00000023658	-	68	72.807	ENSHBUG00000006386	-	99	60.961	Haplochromis_burtoni
ENSACIG00000023658	-	56	87.778	ENSHGLG00000007348	SRSF6	87	68.121	Heterocephalus_glaber_female
ENSACIG00000023658	-	55	69.832	ENSHGLG00000007701	-	90	56.140	Heterocephalus_glaber_female
ENSACIG00000023658	-	56	65.363	ENSHGLG00100005043	SRSF6	85	49.329	Heterocephalus_glaber_male
ENSACIG00000023658	-	88	74.306	ENSHCOG00000002740	srsf6a	93	73.267	Hippocampus_comes
ENSACIG00000023658	-	56	83.978	ENSIPUG00000016856	SRSF6	93	63.385	Ictalurus_punctatus
ENSACIG00000023658	-	56	87.778	ENSSTOG00000010866	SRSF6	87	68.581	Ictidomys_tridecemlineatus
ENSACIG00000023658	-	95	82.237	ENSKMAG00000011934	srsf6a	91	81.100	Kryptolebias_marmoratus
ENSACIG00000023658	-	88	90.110	ENSLBEG00000007356	srsf6a	84	79.630	Labrus_bergylta
ENSACIG00000023658	-	95	66.871	ENSLACG00000005466	SRSF6	95	65.846	Latimeria_chalumnae
ENSACIG00000023658	-	55	79.213	ENSLACG00000009389	-	62	59.105	Latimeria_chalumnae
ENSACIG00000023658	-	56	87.778	ENSMFAG00000036925	SRSF6	86	68.581	Macaca_fascicularis
ENSACIG00000023658	-	56	87.778	ENSMMUG00000006742	SRSF6	86	68.581	Macaca_mulatta
ENSACIG00000023658	-	56	87.222	ENSMNEG00000038270	-	86	68.243	Macaca_nemestrina
ENSACIG00000023658	-	56	87.222	ENSMNEG00000027392	-	86	68.243	Macaca_nemestrina
ENSACIG00000023658	-	71	74.123	ENSMZEG00005008032	-	96	62.338	Maylandia_zebra
ENSACIG00000023658	-	78	81.600	ENSMZEG00005020658	-	94	77.855	Maylandia_zebra
ENSACIG00000023658	-	56	87.222	ENSMICG00000008537	SRSF6	86	71.380	Microcebus_murinus
ENSACIG00000023658	-	56	86.740	ENSMODG00000003107	SRSF6	87	69.360	Monodelphis_domestica
ENSACIG00000023658	-	99	65.570	ENSMALG00000003702	srsf6a	99	65.823	Monopterus_albus
ENSACIG00000023658	-	56	87.778	MGP_CAROLIEiJ_G0024606	Srsf6	87	68.581	Mus_caroli
ENSACIG00000023658	-	56	87.778	ENSMUSG00000016921	Srsf6	87	68.581	Mus_musculus
ENSACIG00000023658	-	56	87.778	MGP_PahariEiJ_G0026050	Srsf6	87	68.581	Mus_pahari
ENSACIG00000023658	-	56	87.778	MGP_SPRETEiJ_G0025528	Srsf6	87	68.581	Mus_spretus
ENSACIG00000023658	-	56	87.778	ENSMPUG00000017692	SRSF6	99	72.535	Mustela_putorius_furo
ENSACIG00000023658	-	56	59.709	ENSMLUG00000016618	SRSF6	90	52.663	Myotis_lucifugus
ENSACIG00000023658	-	56	87.778	ENSNGAG00000017560	Srsf6	89	68.350	Nannospalax_galili
ENSACIG00000023658	-	55	95.000	ENSNBRG00000001846	-	89	80.997	Neolamprologus_brichardi
ENSACIG00000023658	-	56	84.358	ENSNBRG00000014709	-	96	63.934	Neolamprologus_brichardi
ENSACIG00000023658	-	56	87.778	ENSNLEG00000006524	SRSF6	86	68.581	Nomascus_leucogenys
ENSACIG00000023658	-	56	86.740	ENSMEUG00000014615	SRSF6	97	68.814	Notamacropus_eugenii
ENSACIG00000023658	-	76	68.872	ENSONIG00000020247	-	96	60.423	Oreochromis_niloticus
ENSACIG00000023658	-	90	83.601	ENSONIG00000001925	-	91	86.111	Oreochromis_niloticus
ENSACIG00000023658	-	55	53.073	ENSOCUG00000023999	-	74	46.809	Oryctolagus_cuniculus
ENSACIG00000023658	-	55	70.899	ENSOCUG00000009785	-	97	61.168	Oryctolagus_cuniculus
ENSACIG00000023658	-	56	79.006	ENSORLG00000003530	srsf6a	93	63.772	Oryzias_latipes
ENSACIG00000023658	-	56	78.453	ENSORLG00015009410	srsf6a	93	63.473	Oryzias_latipes_hsok
ENSACIG00000023658	-	56	75.556	ENSOMEG00000006001	srsf6a	92	57.895	Oryzias_melastigma
ENSACIG00000023658	-	56	87.222	ENSOGAG00000014468	SRSF6	86	68.350	Otolemur_garnettii
ENSACIG00000023658	-	56	72.626	ENSPPAG00000043131	-	96	56.610	Pan_paniscus
ENSACIG00000023658	-	56	87.222	ENSPPAG00000034327	-	86	68.243	Pan_paniscus
ENSACIG00000023658	-	55	80.899	ENSPTIG00000021305	-	64	60.261	Panthera_tigris_altaica
ENSACIG00000023658	-	56	87.778	ENSPTRG00000044686	-	86	68.581	Pan_troglodytes
ENSACIG00000023658	-	56	72.626	ENSPTRG00000046274	-	96	56.610	Pan_troglodytes
ENSACIG00000023658	-	56	87.778	ENSPANG00000035224	SRSF6	86	68.581	Papio_anubis
ENSACIG00000023658	-	55	74.444	ENSPKIG00000015703	-	95	60.135	Paramormyrops_kingsleyae
ENSACIG00000023658	-	90	75.850	ENSPKIG00000018463	-	70	94.366	Paramormyrops_kingsleyae
ENSACIG00000023658	-	91	76.721	ENSPMGG00000014963	srsf6a	91	78.361	Periophthalmus_magnuspinnatus
ENSACIG00000023658	-	55	81.461	ENSPCIG00000022430	-	69	55.202	Phascolarctos_cinereus
ENSACIG00000023658	-	56	86.740	ENSPCIG00000003820	SRSF6	87	69.360	Phascolarctos_cinereus
ENSACIG00000023658	-	91	81.915	ENSPFOG00000006437	srsf6a	93	73.239	Poecilia_formosa
ENSACIG00000023658	-	91	79.394	ENSPLAG00000009243	srsf6a	93	80.243	Poecilia_latipinna
ENSACIG00000023658	-	52	78.022	ENSPMEG00000006056	SRSF6	89	81.215	Poecilia_mexicana
ENSACIG00000023658	-	84	91.111	ENSPMEG00000006042	SRSF6	92	82.390	Poecilia_mexicana
ENSACIG00000023658	-	56	87.778	ENSPPYG00000011019	SRSF6	86	68.581	Pongo_abelii
ENSACIG00000023658	-	56	86.111	ENSPCAG00000010954	SRSF6	90	69.128	Procavia_capensis
ENSACIG00000023658	-	56	87.222	ENSPCOG00000026364	SRSF6	86	71.044	Propithecus_coquereli
ENSACIG00000023658	-	56	87.778	ENSPVAG00000015232	SRSF6	90	69.355	Pteropus_vampyrus
ENSACIG00000023658	-	56	84.358	ENSPNYG00000004944	-	96	63.934	Pundamilia_nyererei
ENSACIG00000023658	-	79	95.000	ENSPNYG00000011272	-	88	82.663	Pundamilia_nyererei
ENSACIG00000023658	-	56	87.778	ENSRNOG00000006380	Srsf6	87	68.581	Rattus_norvegicus
ENSACIG00000023658	-	56	88.827	ENSRBIG00000041414	SRSF6	86	66.780	Rhinopithecus_bieti
ENSACIG00000023658	-	56	87.778	ENSRROG00000029989	SRSF6	86	68.581	Rhinopithecus_roxellana
ENSACIG00000023658	-	55	71.751	ENSSBOG00000034078	-	87	57.785	Saimiri_boliviensis_boliviensis
ENSACIG00000023658	-	56	87.778	ENSSBOG00000033708	-	86	68.581	Saimiri_boliviensis_boliviensis
ENSACIG00000023658	-	56	86.740	ENSSHAG00000012805	SRSF6	87	69.360	Sarcophilus_harrisii
ENSACIG00000023658	-	91	66.959	ENSSFOG00015019681	-	91	71.045	Scleropages_formosus
ENSACIG00000023658	-	55	94.915	ENSSFOG00015015169	SRSF6	92	78.472	Scleropages_formosus
ENSACIG00000023658	-	55	82.022	ENSSMAG00000017447	-	90	62.376	Scophthalmus_maximus
ENSACIG00000023658	-	65	73.874	ENSSMAG00000014819	-	82	75.362	Scophthalmus_maximus
ENSACIG00000023658	-	87	95.028	ENSSDUG00000016097	srsf6a	93	80.805	Seriola_dumerili
ENSACIG00000023658	-	75	95.028	ENSSLDG00000022841	srsf6a	93	80.805	Seriola_lalandi_dorsalis
ENSACIG00000023658	-	56	88.268	ENSSPUG00000004967	SRSF6	88	67.105	Sphenodon_punctatus
ENSACIG00000023658	-	90	75.676	ENSSPAG00000002362	srsf6a	91	77.365	Stegastes_partitus
ENSACIG00000023658	-	56	87.778	ENSSSCG00000007362	SRSF6	95	72.632	Sus_scrofa
ENSACIG00000023658	-	56	86.740	ENSTGUG00000003455	SRSF6	97	66.667	Taeniopygia_guttata
ENSACIG00000023658	-	89	74.917	ENSTNIG00000001692	srsf6a	96	76.101	Tetraodon_nigroviridis
ENSACIG00000023658	-	98	59.773	ENSXETG00000025503	srsf6	56	59.248	Xenopus_tropicalis
ENSACIG00000023658	-	91	86.645	ENSXMAG00000021849	srsf6a	92	83.987	Xiphophorus_maculatus