EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000023663 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3 (1 of many)
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Plus strand
Length
6998 bases
Position
chrCCOE01000631.1:1021728-1028725
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000030599CPSF73-100_CPF11718.83.3e-5311
ENSACIP00000030599Beta-CaspPF10996.86.6e-3411
ENSACIP00000030599Lactamase_BPF00753.273.3e-0811
ENSACIP00000030599RMMBLPF07521.124.2e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000031396CPSF3 (1 of many)-2011914-ENSACIP00000030599637 (aa)--
Gene Model
Click here to download ENSACIG00000023663's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000023663's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000023663CPSF39985.535ENSACIG00000009846cpsf39985.535
ENSACIG00000023663CPSF38133.652ENSACIG00000016715ints118433.652
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000023663CPSF39986.508ENSG00000119203CPSF39786.508Homo_sapiens
ENSACIG00000023663CPSF37196.896ENSAPOG00000012241CPSF38596.896Acanthochromis_polyacanthus
ENSACIG00000023663CPSF39586.258ENSAPOG00000022087cpsf39986.258Acanthochromis_polyacanthus
ENSACIG00000023663CPSF39986.667ENSAMEG00000008493CPSF39286.667Ailuropoda_melanoleuca
ENSACIG00000023663CPSF310092.936ENSAOCG00000010077CPSF310092.936Amphiprion_ocellaris
ENSACIG00000023663CPSF39979.826ENSAOCG00000022056cpsf39185.851Amphiprion_ocellaris
ENSACIG00000023663CPSF39986.299ENSAPEG00000019526cpsf39986.299Amphiprion_percula
ENSACIG00000023663CPSF310092.936ENSAPEG00000021167CPSF310092.936Amphiprion_percula
ENSACIG00000023663CPSF310081.476ENSATEG00000014525CPSF39187.639Anabas_testudineus
ENSACIG00000023663CPSF39986.614ENSATEG00000003959cpsf39986.614Anabas_testudineus
ENSACIG00000023663CPSF39986.508ENSAPLG00000006941CPSF39286.508Anas_platyrhynchos
ENSACIG00000023663CPSF39984.945ENSACAG00000001759CPSF39984.945Anolis_carolinensis
ENSACIG00000023663CPSF39980.635ENSANAG00000031254CPSF39380.635Aotus_nancymaae
ENSACIG00000023663CPSF39986.614ENSACLG00000014484cpsf39986.614Astatotilapia_calliptera
ENSACIG00000023663CPSF310098.901ENSACLG00000018846CPSF310098.901Astatotilapia_calliptera
ENSACIG00000023663CPSF310086.970ENSAMXG00000004786cpsf310086.970Astyanax_mexicanus
ENSACIG00000023663CPSF39986.825ENSBTAG00000019735CPSF39286.825Bos_taurus
ENSACIG00000023663CPSF38956.649WBGene00013460cpsf-38156.649Caenorhabditis_elegans
ENSACIG00000023663CPSF39986.190ENSCJAG00000006276CPSF39286.190Callithrix_jacchus
ENSACIG00000023663CPSF39986.667ENSCAFG00000003375CPSF38886.667Canis_familiaris
ENSACIG00000023663CPSF38989.399ENSCAFG00020026799CPSF39189.399Canis_lupus_dingo
ENSACIG00000023663CPSF39986.825ENSCHIG00000013973CPSF39286.825Capra_hircus
ENSACIG00000023663CPSF39986.508ENSTSYG00000002967CPSF39286.508Carlito_syrichta
ENSACIG00000023663CPSF39986.825ENSCAPG00000013851CPSF39486.825Cavia_aperea
ENSACIG00000023663CPSF39986.825ENSCPOG00000011299CPSF39286.825Cavia_porcellus
ENSACIG00000023663CPSF39986.349ENSCCAG00000036730CPSF39386.349Cebus_capucinus
ENSACIG00000023663CPSF39984.152ENSCATG00000014770CPSF39092.045Cercocebus_atys
ENSACIG00000023663CPSF39986.667ENSCLAG00000002727CPSF39286.667Chinchilla_lanigera
ENSACIG00000023663CPSF39977.937ENSCSAG00000007125CPSF39177.937Chlorocebus_sabaeus
ENSACIG00000023663CPSF38963.269ENSCHOG00000000180CPSF38563.269Choloepus_hoffmanni
ENSACIG00000023663CPSF39986.508ENSCPBG00000014074CPSF39186.508Chrysemys_picta_bellii
ENSACIG00000023663CPSF39967.559ENSCING00000007214-9067.559Ciona_intestinalis
ENSACIG00000023663CPSF39975.873ENSCANG00000034435CPSF39175.873Colobus_angolensis_palliatus
ENSACIG00000023663CPSF39986.349ENSCGRG00001013134Cpsf39286.349Cricetulus_griseus_chok1gshd
ENSACIG00000023663CPSF39986.349ENSCGRG00000018319Cpsf39286.349Cricetulus_griseus_crigri
ENSACIG00000023663CPSF39991.772ENSCSEG00000002021CPSF310089.515Cynoglossus_semilaevis
ENSACIG00000023663CPSF35073.585ENSCVAG00000022039-9473.585Cyprinodon_variegatus
ENSACIG00000023663CPSF310086.831ENSCVAG00000015067CPSF39193.502Cyprinodon_variegatus
ENSACIG00000023663CPSF310081.766ENSDARG00000027649cpsf39187.956Danio_rerio
ENSACIG00000023663CPSF39985.578ENSDNOG00000008940CPSF38885.578Dasypus_novemcinctus
ENSACIG00000023663CPSF39487.458ENSDORG00000014263Cpsf39287.458Dipodomys_ordii
ENSACIG00000023663CPSF39864.480FBgn0261065Cpsf739064.480Drosophila_melanogaster
ENSACIG00000023663CPSF39477.926ENSETEG00000003893CPSF39277.926Echinops_telfairi
ENSACIG00000023663CPSF39875.195ENSEBUG00000009018cpsf39075.663Eptatretus_burgeri
ENSACIG00000023663CPSF39986.667ENSEASG00005003970CPSF39286.667Equus_asinus_asinus
ENSACIG00000023663CPSF39986.667ENSECAG00000019911CPSF38891.376Equus_caballus
ENSACIG00000023663CPSF39866.129ENSEEUG00000015422CPSF39966.129Erinaceus_europaeus
ENSACIG00000023663CPSF39990.079ENSELUG00000013775cpsf39990.079Esox_lucius
ENSACIG00000023663CPSF39986.825ENSFCAG00000007852CPSF39786.825Felis_catus
ENSACIG00000023663CPSF39986.349ENSFALG00000006572CPSF39786.349Ficedula_albicollis
ENSACIG00000023663CPSF39986.169ENSFDAG00000006317CPSF39186.169Fukomys_damarensis
ENSACIG00000023663CPSF36478.537ENSFHEG00000012186CPSF310078.537Fundulus_heteroclitus
ENSACIG00000023663CPSF39978.229ENSFHEG00000014774cpsf39184.102Fundulus_heteroclitus
ENSACIG00000023663CPSF39981.014ENSGMOG00000003157cpsf39187.143Gadus_morhua
ENSACIG00000023663CPSF39985.873ENSGALG00000016424CPSF39985.873Gallus_gallus
ENSACIG00000023663CPSF310085.557ENSGAFG00000019449cpsf310085.557Gambusia_affinis
ENSACIG00000023663CPSF310086.975ENSGAFG00000008016CPSF39193.819Gambusia_affinis
ENSACIG00000023663CPSF37384.582ENSGAGG00000025583CPSF39384.582Gopherus_agassizii
ENSACIG00000023663CPSF39986.508ENSGGOG00000001757CPSF39986.508Gorilla_gorilla
ENSACIG00000023663CPSF39986.614ENSHBUG00000001188cpsf39986.614Haplochromis_burtoni
ENSACIG00000023663CPSF36494.335ENSHBUG00000014332CPSF310094.335Haplochromis_burtoni
ENSACIG00000023663CPSF39986.010ENSHGLG00000000666CPSF39186.010Heterocephalus_glaber_female
ENSACIG00000023663CPSF39986.010ENSHGLG00100007765CPSF39186.010Heterocephalus_glaber_male
ENSACIG00000023663CPSF39985.362ENSHCOG00000015957CPSF39091.905Hippocampus_comes
ENSACIG00000023663CPSF39978.986ENSHCOG00000007251cpsf39184.762Hippocampus_comes
ENSACIG00000023663CPSF310085.449ENSIPUG00000023488cpsf310086.813Ictalurus_punctatus
ENSACIG00000023663CPSF39986.667ENSSTOG00000004476CPSF39286.667Ictidomys_tridecemlineatus
ENSACIG00000023663CPSF39985.873ENSJJAG00000023415Cpsf39285.873Jaculus_jaculus
ENSACIG00000023663CPSF39978.665ENSKMAG00000002806cpsf39184.420Kryptolebias_marmoratus
ENSACIG00000023663CPSF310087.699ENSKMAG00000007317CPSF39194.453Kryptolebias_marmoratus
ENSACIG00000023663CPSF35982.306ENSLBEG00000015018-9982.306Labrus_bergylta
ENSACIG00000023663CPSF39973.768ENSLBEG00000020569cpsf38679.206Labrus_bergylta
ENSACIG00000023663CPSF39587.386ENSLBEG00000013492CPSF39094.482Labrus_bergylta
ENSACIG00000023663CPSF310072.648ENSLACG00000008308CPSF39178.130Latimeria_chalumnae
ENSACIG00000023663CPSF310081.674ENSLOCG00000016823cpsf39187.836Lepisosteus_oculatus
ENSACIG00000023663CPSF39986.667ENSLAFG00000009467CPSF39286.667Loxodonta_africana
ENSACIG00000023663CPSF39986.349ENSMFAG00000001339CPSF39786.349Macaca_fascicularis
ENSACIG00000023663CPSF39986.349ENSMMUG00000018038CPSF39786.349Macaca_mulatta
ENSACIG00000023663CPSF39993.000ENSMNEG00000039447CPSF39993.000Macaca_nemestrina
ENSACIG00000023663CPSF39986.508ENSMLEG00000026825CPSF39286.508Mandrillus_leucophaeus
ENSACIG00000023663CPSF39983.307ENSMAMG00000003076cpsf39983.307Mastacembelus_armatus
ENSACIG00000023663CPSF310095.618ENSMAMG00000008835CPSF310095.618Mastacembelus_armatus
ENSACIG00000023663CPSF39986.614ENSMZEG00005014358cpsf39986.614Maylandia_zebra
ENSACIG00000023663CPSF310098.901ENSMZEG00005006258CPSF310098.901Maylandia_zebra
ENSACIG00000023663CPSF39985.873ENSMGAG00000013995CPSF39485.873Meleagris_gallopavo
ENSACIG00000023663CPSF35980.000ENSMAUG00000000166Cpsf39980.000Mesocricetus_auratus
ENSACIG00000023663CPSF39981.270ENSMICG00000002363CPSF39881.270Microcebus_murinus
ENSACIG00000023663CPSF39983.175ENSMOCG00000020067Cpsf39183.175Microtus_ochrogaster
ENSACIG00000023663CPSF37980.851ENSMMOG00000011923CPSF38580.851Mola_mola
ENSACIG00000023663CPSF39981.558ENSMMOG00000018212CPSF39581.558Mola_mola
ENSACIG00000023663CPSF39985.243ENSMODG00000014703CPSF39285.243Monodelphis_domestica
ENSACIG00000023663CPSF39986.478ENSMALG00000016416cpsf39986.478Monopterus_albus
ENSACIG00000023663CPSF39692.182ENSMALG00000011474CPSF39692.182Monopterus_albus
ENSACIG00000023663CPSF39986.032MGP_CAROLIEiJ_G0017640Cpsf39286.032Mus_caroli
ENSACIG00000023663CPSF39986.032ENSMUSG00000054309Cpsf39193.694Mus_musculus
ENSACIG00000023663CPSF39985.873MGP_PahariEiJ_G0029397Cpsf39285.873Mus_pahari
ENSACIG00000023663CPSF39986.032MGP_SPRETEiJ_G0018481Cpsf39286.032Mus_spretus
ENSACIG00000023663CPSF39986.645ENSMPUG00000013213CPSF39286.645Mustela_putorius_furo
ENSACIG00000023663CPSF39986.529ENSMLUG00000010636CPSF39286.529Myotis_lucifugus
ENSACIG00000023663CPSF39986.190ENSNGAG00000019836Cpsf39286.190Nannospalax_galili
ENSACIG00000023663CPSF39985.984ENSNBRG00000004770cpsf39985.984Neolamprologus_brichardi
ENSACIG00000023663CPSF310098.901ENSNBRG00000010525CPSF310098.901Neolamprologus_brichardi
ENSACIG00000023663CPSF39986.349ENSNLEG00000013359CPSF39786.349Nomascus_leucogenys
ENSACIG00000023663CPSF39955.873ENSMEUG00000013117-9255.873Notamacropus_eugenii
ENSACIG00000023663CPSF39977.266ENSOPRG00000008902CPSF39277.266Ochotona_princeps
ENSACIG00000023663CPSF39986.667ENSODEG00000003129CPSF39286.667Octodon_degus
ENSACIG00000023663CPSF39980.697ENSONIG00000018812cpsf39186.645Oreochromis_niloticus
ENSACIG00000023663CPSF38886.679ENSOANG00000008577CPSF39986.679Ornithorhynchus_anatinus
ENSACIG00000023663CPSF39986.349ENSOCUG00000003728CPSF39286.349Oryctolagus_cuniculus
ENSACIG00000023663CPSF39978.374ENSORLG00000018854cpsf39184.579Oryzias_latipes
ENSACIG00000023663CPSF39983.780ENSORLG00020013331cpsf39983.780Oryzias_latipes_hni
ENSACIG00000023663CPSF39983.962ENSORLG00015011017cpsf39983.962Oryzias_latipes_hsok
ENSACIG00000023663CPSF39978.810ENSOMEG00000010647cpsf38784.897Oryzias_melastigma
ENSACIG00000023663CPSF39975.714ENSOGAG00000001680CPSF39275.714Otolemur_garnettii
ENSACIG00000023663CPSF39986.825ENSOARG00000015073CPSF39286.825Ovis_aries
ENSACIG00000023663CPSF39986.508ENSPPAG00000042457CPSF39286.508Pan_paniscus
ENSACIG00000023663CPSF39986.825ENSPPRG00000016790CPSF39786.825Panthera_pardus
ENSACIG00000023663CPSF39986.825ENSPTIG00000003920CPSF39986.825Panthera_tigris_altaica
ENSACIG00000023663CPSF39986.508ENSPTRG00000011638CPSF39286.508Pan_troglodytes
ENSACIG00000023663CPSF39986.349ENSPANG00000016798CPSF39286.349Papio_anubis
ENSACIG00000023663CPSF310089.796ENSPKIG00000023646cpsf310089.796Paramormyrops_kingsleyae
ENSACIG00000023663CPSF39986.508ENSPSIG00000016144CPSF39286.508Pelodiscus_sinensis
ENSACIG00000023663CPSF38691.289ENSPMGG00000006141-9591.289Periophthalmus_magnuspinnatus
ENSACIG00000023663CPSF36489.409ENSPMGG00000015311CPSF310089.409Periophthalmus_magnuspinnatus
ENSACIG00000023663CPSF39986.667ENSPEMG00000017668Cpsf39286.667Peromyscus_maniculatus_bairdii
ENSACIG00000023663CPSF37687.835ENSPMAG00000004841cpsf38987.835Petromyzon_marinus
ENSACIG00000023663CPSF39986.032ENSPCIG00000009823CPSF39386.032Phascolarctos_cinereus
ENSACIG00000023663CPSF310078.292ENSPFOG00000015922cpsf39184.152Poecilia_formosa
ENSACIG00000023663CPSF310086.397ENSPFOG00000010418-9193.344Poecilia_formosa
ENSACIG00000023663CPSF36492.365ENSPLAG00000021300-10092.365Poecilia_latipinna
ENSACIG00000023663CPSF310078.292ENSPLAG00000000882cpsf39184.152Poecilia_latipinna
ENSACIG00000023663CPSF310078.437ENSPMEG00000018309cpsf39184.311Poecilia_mexicana
ENSACIG00000023663CPSF310079.595ENSPREG00000004482CPSF39185.737Poecilia_reticulata
ENSACIG00000023663CPSF310085.400ENSPREG00000014875cpsf310085.400Poecilia_reticulata
ENSACIG00000023663CPSF39981.905ENSPPYG00000012666CPSF39181.905Pongo_abelii
ENSACIG00000023663CPSF38365.073ENSPCAG00000015042CPSF38165.073Procavia_capensis
ENSACIG00000023663CPSF38684.279ENSPCOG00000023016CPSF38884.279Propithecus_coquereli
ENSACIG00000023663CPSF39986.486ENSPVAG00000005324CPSF39286.486Pteropus_vampyrus
ENSACIG00000023663CPSF38699.271ENSPNYG00000021047CPSF39299.271Pundamilia_nyererei
ENSACIG00000023663CPSF39986.614ENSPNYG00000004405cpsf39986.614Pundamilia_nyererei
ENSACIG00000023663CPSF310088.540ENSPNAG00000023060cpsf310088.540Pygocentrus_nattereri
ENSACIG00000023663CPSF39985.737ENSRNOG00000052418Cpsf39285.737Rattus_norvegicus
ENSACIG00000023663CPSF39983.016ENSRBIG00000041615CPSF39783.016Rhinopithecus_bieti
ENSACIG00000023663CPSF39986.508ENSRROG00000033792CPSF39286.508Rhinopithecus_roxellana
ENSACIG00000023663CPSF38341.993YLR277CYSH17841.993Saccharomyces_cerevisiae
ENSACIG00000023663CPSF39982.808ENSSBOG00000027263CPSF39282.808Saimiri_boliviensis_boliviensis
ENSACIG00000023663CPSF39985.873ENSSHAG00000007024CPSF39285.873Sarcophilus_harrisii
ENSACIG00000023663CPSF310089.168ENSSFOG00015002108cpsf310089.168Scleropages_formosus
ENSACIG00000023663CPSF39585.562ENSSMAG00000020534CPSF39492.308Scophthalmus_maximus
ENSACIG00000023663CPSF310096.232ENSSDUG00000018498CPSF310096.232Seriola_dumerili
ENSACIG00000023663CPSF39986.486ENSSDUG00000002828cpsf38886.486Seriola_dumerili
ENSACIG00000023663CPSF310095.447ENSSLDG00000005234CPSF310095.447Seriola_lalandi_dorsalis
ENSACIG00000023663CPSF39986.645ENSSLDG00000008469cpsf38886.645Seriola_lalandi_dorsalis
ENSACIG00000023663CPSF39969.524ENSSARG00000005186CPSF39269.524Sorex_araneus
ENSACIG00000023663CPSF39984.543ENSSPUG00000015525CPSF39284.543Sphenodon_punctatus
ENSACIG00000023663CPSF39980.406ENSSPAG00000018579cpsf39186.486Stegastes_partitus
ENSACIG00000023663CPSF310094.976ENSSPAG00000002906CPSF310094.976Stegastes_partitus
ENSACIG00000023663CPSF39887.879ENSSSCG00000020799CPSF39987.879Sus_scrofa
ENSACIG00000023663CPSF39986.190ENSTGUG00000013016CPSF39286.190Taeniopygia_guttata
ENSACIG00000023663CPSF39980.261ENSTRUG00000007030cpsf39779.703Takifugu_rubripes
ENSACIG00000023663CPSF36479.607ENSTRUG00000013905CPSF310079.607Takifugu_rubripes
ENSACIG00000023663CPSF38387.821ENSTBEG00000002707CPSF37687.821Tupaia_belangeri
ENSACIG00000023663CPSF38668.975ENSTTRG00000000861CPSF38068.975Tursiops_truncatus
ENSACIG00000023663CPSF39587.294ENSUAMG00000007535CPSF38787.294Ursus_americanus
ENSACIG00000023663CPSF39986.667ENSUMAG00000003676CPSF39786.667Ursus_maritimus
ENSACIG00000023663CPSF39486.622ENSVPAG00000008041CPSF39486.622Vicugna_pacos
ENSACIG00000023663CPSF39986.667ENSVVUG00000002194CPSF39286.667Vulpes_vulpes
ENSACIG00000023663CPSF39984.261ENSXETG00000008263cpsf39184.261Xenopus_tropicalis
ENSACIG00000023663CPSF39984.469ENSXCOG00000019695cpsf39184.469Xiphophorus_couchianus
ENSACIG00000023663CPSF35991.153ENSXCOG00000000957-8791.153Xiphophorus_couchianus
ENSACIG00000023663CPSF39984.311ENSXMAG00000009784cpsf39784.311Xiphophorus_maculatus
ENSACIG00000023663CPSF310086.541ENSXMAG00000027291CPSF39193.344Xiphophorus_maculatus

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