EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000023717 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162879
Alias: -
Full Name: zgc:162879
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 11079 bases
Position: chrCCOE01000477.1:1366951-1378029
Accession: ZDB-GENE-070424-92
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000030669	MMR_HSR1	PF01926.23	8.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000031471	-	1974	-	ENSACIP00000030669	657 (aa)	-	-

Gene Model

Click here to download ENSACIG00000023717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000023717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000023717	zgc:162879	95	37.291	ENSACIG00000005549	rasef	77	58.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000023717	zgc:162879	99	83.030	ENSAPOG00000008539	zgc:162879	99	83.030	Acanthochromis_polyacanthus
ENSACIG00000023717	zgc:162879	84	80.536	ENSAOCG00000006210	zgc:162879	87	80.536	Amphiprion_ocellaris
ENSACIG00000023717	zgc:162879	99	83.939	ENSAPEG00000017489	zgc:162879	99	83.939	Amphiprion_percula
ENSACIG00000023717	zgc:162879	100	86.165	ENSATEG00000006102	zgc:162879	100	86.165	Anabas_testudineus
ENSACIG00000023717	zgc:162879	100	89.759	ENSACLG00000021066	zgc:162879	100	88.432	Astatotilapia_calliptera
ENSACIG00000023717	zgc:162879	100	63.447	ENSAMXG00000007430	zgc:162879	100	63.447	Astyanax_mexicanus
ENSACIG00000023717	zgc:162879	99	57.382	ENSCSEG00000013699	zgc:162879	99	57.382	Cynoglossus_semilaevis
ENSACIG00000023717	zgc:162879	99	75.340	ENSCVAG00000014510	zgc:162879	99	75.340	Cyprinodon_variegatus
ENSACIG00000023717	zgc:162879	100	63.609	ENSDARG00000074163	zgc:162879	100	63.609	Danio_rerio
ENSACIG00000023717	zgc:162879	99	57.710	ENSELUG00000019483	zgc:162879	97	65.846	Esox_lucius
ENSACIG00000023717	zgc:162879	76	72.421	ENSFHEG00000022549	zgc:162879	100	72.421	Fundulus_heteroclitus
ENSACIG00000023717	zgc:162879	100	74.471	ENSGAFG00000001313	zgc:162879	100	74.471	Gambusia_affinis
ENSACIG00000023717	zgc:162879	100	75.613	ENSGACG00000010798	zgc:162879	99	75.325	Gasterosteus_aculeatus
ENSACIG00000023717	zgc:162879	100	89.910	ENSHBUG00000016335	zgc:162879	100	89.910	Haplochromis_burtoni
ENSACIG00000023717	zgc:162879	100	51.048	ENSHCOG00000012026	zgc:162879	99	59.669	Hippocampus_comes
ENSACIG00000023717	zgc:162879	100	70.061	ENSKMAG00000016246	zgc:162879	100	69.453	Kryptolebias_marmoratus
ENSACIG00000023717	zgc:162879	99	77.143	ENSLBEG00000006690	zgc:162879	100	77.143	Labrus_bergylta
ENSACIG00000023717	zgc:162879	96	57.329	ENSLACG00000014082	-	88	56.678	Latimeria_chalumnae
ENSACIG00000023717	zgc:162879	99	59.347	ENSLOCG00000014347	zgc:162879	98	59.347	Lepisosteus_oculatus
ENSACIG00000023717	zgc:162879	100	82.192	ENSMAMG00000008875	zgc:162879	100	82.192	Mastacembelus_armatus
ENSACIG00000023717	zgc:162879	100	89.608	ENSMZEG00005022256	zgc:162879	100	89.608	Maylandia_zebra
ENSACIG00000023717	zgc:162879	100	82.040	ENSNBRG00000020110	zgc:162879	100	82.040	Neolamprologus_brichardi
ENSACIG00000023717	zgc:162879	99	86.000	ENSONIG00000015165	zgc:162879	100	86.000	Oreochromis_niloticus
ENSACIG00000023717	zgc:162879	99	69.637	ENSORLG00015017960	zgc:162879	99	69.637	Oryzias_latipes_hsok
ENSACIG00000023717	zgc:162879	100	55.606	ENSPKIG00000020661	zgc:162879	100	58.157	Paramormyrops_kingsleyae
ENSACIG00000023717	zgc:162879	100	74.018	ENSPFOG00000006354	zgc:162879	99	74.018	Poecilia_formosa
ENSACIG00000023717	zgc:162879	100	74.018	ENSPLAG00000020643	zgc:162879	99	74.018	Poecilia_latipinna
ENSACIG00000023717	zgc:162879	100	73.716	ENSPMEG00000014713	zgc:162879	100	73.716	Poecilia_mexicana
ENSACIG00000023717	zgc:162879	100	81.735	ENSPNYG00000010530	zgc:162879	100	81.735	Pundamilia_nyererei
ENSACIG00000023717	zgc:162879	100	62.463	ENSPNAG00000012022	zgc:162879	100	62.463	Pygocentrus_nattereri
ENSACIG00000023717	zgc:162879	91	49.678	ENSSFOG00015023774	zgc:162879	97	49.678	Scleropages_formosus
ENSACIG00000023717	zgc:162879	100	79.248	ENSSMAG00000001513	zgc:162879	99	79.248	Scophthalmus_maximus
ENSACIG00000023717	zgc:162879	100	86.617	ENSSDUG00000011478	zgc:162879	100	86.617	Seriola_dumerili
ENSACIG00000023717	zgc:162879	100	86.617	ENSSLDG00000000877	zgc:162879	100	86.617	Seriola_lalandi_dorsalis
ENSACIG00000023717	zgc:162879	99	77.761	ENSSPAG00000010598	zgc:162879	99	77.761	Stegastes_partitus
ENSACIG00000023717	zgc:162879	99	70.922	ENSTNIG00000019239	zgc:162879	99	70.922	Tetraodon_nigroviridis
ENSACIG00000023717	zgc:162879	99	41.586	ENSXETG00000015491	rasef	98	40.890	Xenopus_tropicalis
ENSACIG00000023717	zgc:162879	77	69.841	ENSXCOG00000020244	zgc:162879	100	70.238	Xiphophorus_couchianus
ENSACIG00000023717	zgc:162879	100	75.529	ENSXMAG00000002846	zgc:162879	100	75.529	Xiphophorus_maculatus