EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000023762 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 12334 bases
Position: chrCCOE01000477.1:1589369-1601702
Accession: ZDB-GENE-070702-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000030785	HRDC	PF00570.23	2.2e-15	1	1
ENSACIP00000030785	BDHCT	PF08072.11	8.6e-17	1	1
ENSACIP00000030785	DEAD	PF00270.29	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000031573	-	975	-	ENSACIP00000030768	324 (aa)	-	-
ENSACIT00000031590	-	4140	-	ENSACIP00000030785	1379 (aa)	-	-
ENSACIT00000031576	-	792	-	ENSACIP00000030771	263 (aa)	-	-
ENSACIT00000031581	-	921	-	ENSACIP00000030776	306 (aa)	-	-

Gene Model

Click here to download ENSACIG00000023762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000023762's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000023762	blm	56	65.217	ENSG00000197299	BLM	50	74.433	Homo_sapiens
ENSACIG00000023762	blm	100	75.809	ENSAPOG00000017966	blm	100	76.653	Acanthochromis_polyacanthus
ENSACIG00000023762	blm	65	64.223	ENSAMEG00000013843	BLM	64	64.322	Ailuropoda_melanoleuca
ENSACIG00000023762	blm	100	74.123	ENSAOCG00000003318	blm	100	74.544	Amphiprion_ocellaris
ENSACIG00000023762	blm	100	75.596	ENSAPEG00000018105	blm	100	76.508	Amphiprion_percula
ENSACIG00000023762	blm	99	76.190	ENSATEG00000006421	blm	100	76.120	Anabas_testudineus
ENSACIG00000023762	blm	79	50.876	ENSAPLG00000006878	BLM	83	60.748	Anas_platyrhynchos
ENSACIG00000023762	blm	56	66.115	ENSACAG00000014275	BLM	64	66.158	Anolis_carolinensis
ENSACIG00000023762	blm	56	65.051	ENSANAG00000038415	BLM	50	74.227	Aotus_nancymaae
ENSACIG00000023762	blm	100	85.014	ENSACLG00000020354	blm	100	84.752	Astatotilapia_calliptera
ENSACIG00000023762	blm	99	55.922	ENSAMXG00000016970	blm	99	56.757	Astyanax_mexicanus
ENSACIG00000023762	blm	57	79.404	ENSBTAG00000020301	BLM	60	79.404	Bos_taurus
ENSACIG00000023762	blm	56	65.557	ENSCJAG00000009803	BLM	50	74.433	Callithrix_jacchus
ENSACIG00000023762	blm	65	63.868	ENSCAFG00000012385	BLM	64	63.682	Canis_familiaris
ENSACIG00000023762	blm	65	63.868	ENSCAFG00020016111	BLM	89	66.441	Canis_lupus_dingo
ENSACIG00000023762	blm	56	79.133	ENSCHIG00000010329	BLM	60	79.133	Capra_hircus
ENSACIG00000023762	blm	56	64.968	ENSTSYG00000012368	BLM	51	73.196	Carlito_syrichta
ENSACIG00000023762	blm	51	72.101	ENSCAPG00000017976	BLM	58	72.101	Cavia_aperea
ENSACIG00000023762	blm	67	62.515	ENSCPOG00000001761	BLM	67	62.053	Cavia_porcellus
ENSACIG00000023762	blm	56	65.301	ENSCCAG00000023069	BLM	51	74.227	Cebus_capucinus
ENSACIG00000023762	blm	56	65.090	ENSCATG00000040609	BLM	75	76.066	Cercocebus_atys
ENSACIG00000023762	blm	56	64.962	ENSCSAG00000017040	BLM	55	65.217	Chlorocebus_sabaeus
ENSACIG00000023762	blm	59	59.259	ENSCHOG00000006255	BLM	60	59.259	Choloepus_hoffmanni
ENSACIG00000023762	blm	72	60.619	ENSCPBG00000025000	BLM	97	53.888	Chrysemys_picta_bellii
ENSACIG00000023762	blm	60	62.574	ENSCGRG00001024897	Blm	60	62.915	Cricetulus_griseus_chok1gshd
ENSACIG00000023762	blm	93	67.698	ENSCSEG00000013483	blm	99	67.846	Cynoglossus_semilaevis
ENSACIG00000023762	blm	76	70.940	ENSCVAG00000017583	blm	94	77.841	Cyprinodon_variegatus
ENSACIG00000023762	blm	99	56.563	ENSDARG00000077089	blm	100	57.375	Danio_rerio
ENSACIG00000023762	blm	59	63.202	ENSDORG00000011033	Blm	99	55.048	Dipodomys_ordii
ENSACIG00000023762	blm	56	53.488	ENSETEG00000015019	BLM	52	51.394	Echinops_telfairi
ENSACIG00000023762	blm	68	58.711	ENSEASG00005006727	BLM	68	59.075	Equus_asinus_asinus
ENSACIG00000023762	blm	68	58.452	ENSECAG00000011405	BLM	67	58.837	Equus_caballus
ENSACIG00000023762	blm	84	63.995	ENSEEUG00000001434	BLM	59	63.878	Erinaceus_europaeus
ENSACIG00000023762	blm	99	60.272	ENSELUG00000019098	blm	99	60.204	Esox_lucius
ENSACIG00000023762	blm	64	64.646	ENSFCAG00000006087	BLM	59	73.608	Felis_catus
ENSACIG00000023762	blm	73	53.810	ENSFALG00000010981	BLM	89	52.968	Ficedula_albicollis
ENSACIG00000023762	blm	53	64.253	ENSFDAG00000012658	BLM	56	64.253	Fukomys_damarensis
ENSACIG00000023762	blm	100	70.675	ENSFHEG00000002553	blm	100	70.886	Fundulus_heteroclitus
ENSACIG00000023762	blm	99	60.071	ENSGMOG00000016431	blm	98	71.047	Gadus_morhua
ENSACIG00000023762	blm	78	51.680	ENSGALG00000008256	BLM	83	51.291	Gallus_gallus
ENSACIG00000023762	blm	100	71.196	ENSGAFG00000001117	blm	98	75.166	Gambusia_affinis
ENSACIG00000023762	blm	99	70.443	ENSGACG00000010863	blm	100	89.773	Gasterosteus_aculeatus
ENSACIG00000023762	blm	52	70.521	ENSGAGG00000005383	BLM	73	70.521	Gopherus_agassizii
ENSACIG00000023762	blm	56	65.390	ENSGGOG00000007710	BLM	75	76.066	Gorilla_gorilla
ENSACIG00000023762	blm	100	85.724	ENSHBUG00000015943	blm	100	85.816	Haplochromis_burtoni
ENSACIG00000023762	blm	73	52.749	ENSHGLG00000013231	BLM	68	61.337	Heterocephalus_glaber_female
ENSACIG00000023762	blm	73	70.000	ENSHCOG00000011455	blm	99	72.075	Hippocampus_comes
ENSACIG00000023762	blm	76	62.665	ENSIPUG00000000529	blm	89	61.815	Ictalurus_punctatus
ENSACIG00000023762	blm	64	64.751	ENSSTOG00000005000	BLM	65	64.758	Ictidomys_tridecemlineatus
ENSACIG00000023762	blm	100	72.156	ENSKMAG00000016608	blm	100	73.104	Kryptolebias_marmoratus
ENSACIG00000023762	blm	58	82.524	ENSLBEG00000018729	blm	97	82.524	Labrus_bergylta
ENSACIG00000023762	blm	59	65.562	ENSLACG00000006490	BLM	78	54.663	Latimeria_chalumnae
ENSACIG00000023762	blm	99	54.041	ENSLOCG00000014302	blm	87	70.823	Lepisosteus_oculatus
ENSACIG00000023762	blm	56	65.217	ENSMFAG00000042982	BLM	75	76.393	Macaca_fascicularis
ENSACIG00000023762	blm	56	65.217	ENSMMUG00000019526	BLM	75	76.393	Macaca_mulatta
ENSACIG00000023762	blm	56	61.460	ENSMLEG00000032934	BLM	54	61.716	Mandrillus_leucophaeus
ENSACIG00000023762	blm	99	72.952	ENSMAMG00000008726	blm	99	73.305	Mastacembelus_armatus
ENSACIG00000023762	blm	100	84.270	ENSMZEG00005022323	blm	100	83.843	Maylandia_zebra
ENSACIG00000023762	blm	90	62.089	ENSMAUG00000008953	Blm	68	62.456	Mesocricetus_auratus
ENSACIG00000023762	blm	56	64.923	ENSMICG00000034442	BLM	50	73.608	Microcebus_murinus
ENSACIG00000023762	blm	59	63.527	ENSMOCG00000016367	Blm	58	63.780	Microtus_ochrogaster
ENSACIG00000023762	blm	100	71.670	ENSMMOG00000006959	blm	100	71.529	Mola_mola
ENSACIG00000023762	blm	66	62.799	ENSMODG00000019449	BLM	66	62.560	Monodelphis_domestica
ENSACIG00000023762	blm	100	74.474	ENSMALG00000007323	blm	100	74.474	Monopterus_albus
ENSACIG00000023762	blm	60	61.910	MGP_CAROLIEiJ_G0029907	Blm	59	61.876	Mus_caroli
ENSACIG00000023762	blm	60	62.574	ENSMUSG00000030528	Blm	59	62.249	Mus_musculus
ENSACIG00000023762	blm	68	62.134	MGP_PahariEiJ_G0013129	Blm	68	62.233	Mus_pahari
ENSACIG00000023762	blm	60	62.574	MGP_SPRETEiJ_G0031009	Blm	59	62.293	Mus_spretus
ENSACIG00000023762	blm	59	61.575	ENSMLUG00000014697	BLM	68	61.366	Myotis_lucifugus
ENSACIG00000023762	blm	90	61.990	ENSNGAG00000001275	Blm	69	61.990	Nannospalax_galili
ENSACIG00000023762	blm	100	84.337	ENSNBRG00000019702	blm	100	84.125	Neolamprologus_brichardi
ENSACIG00000023762	blm	56	62.708	ENSNLEG00000012087	BLM	74	61.401	Nomascus_leucogenys
ENSACIG00000023762	blm	52	64.917	ENSOPRG00000011667	BLM	51	64.958	Ochotona_princeps
ENSACIG00000023762	blm	73	50.763	ENSODEG00000015373	BLM	80	57.692	Octodon_degus
ENSACIG00000023762	blm	100	81.597	ENSONIG00000015193	blm	100	81.900	Oreochromis_niloticus
ENSACIG00000023762	blm	55	65.513	ENSOANG00000009316	-	100	65.380	Ornithorhynchus_anatinus
ENSACIG00000023762	blm	89	61.005	ENSOCUG00000013969	BLM	68	61.005	Oryctolagus_cuniculus
ENSACIG00000023762	blm	100	72.984	ENSORLG00000008110	blm	100	73.126	Oryzias_latipes
ENSACIG00000023762	blm	100	72.772	ENSORLG00020004812	blm	100	72.914	Oryzias_latipes_hni
ENSACIG00000023762	blm	100	72.914	ENSORLG00015018640	blm	99	76.190	Oryzias_latipes_hsok
ENSACIG00000023762	blm	100	70.904	ENSOMEG00000023545	blm	100	70.975	Oryzias_melastigma
ENSACIG00000023762	blm	56	63.625	ENSOGAG00000005708	BLM	55	63.371	Otolemur_garnettii
ENSACIG00000023762	blm	64	64.602	ENSOARG00000012875	BLM	63	65.350	Ovis_aries
ENSACIG00000023762	blm	60	61.765	ENSPPAG00000032173	BLM	50	74.639	Pan_paniscus
ENSACIG00000023762	blm	64	64.394	ENSPPRG00000002471	BLM	59	73.608	Panthera_pardus
ENSACIG00000023762	blm	64	63.636	ENSPTIG00000016168	BLM	59	72.505	Panthera_tigris_altaica
ENSACIG00000023762	blm	56	65.045	ENSPTRG00000007460	BLM	50	74.587	Pan_troglodytes
ENSACIG00000023762	blm	56	65.090	ENSPANG00000018572	BLM	75	76.393	Papio_anubis
ENSACIG00000023762	blm	99	56.139	ENSPKIG00000008954	blm	99	55.806	Paramormyrops_kingsleyae
ENSACIG00000023762	blm	69	70.876	ENSPMGG00000006629	blm	99	71.692	Periophthalmus_magnuspinnatus
ENSACIG00000023762	blm	90	62.854	ENSPEMG00000017348	Blm	68	62.278	Peromyscus_maniculatus_bairdii
ENSACIG00000023762	blm	100	70.389	ENSPFOG00000005059	blm	100	70.651	Poecilia_formosa
ENSACIG00000023762	blm	100	70.106	ENSPLAG00000017344	blm	100	70.368	Poecilia_latipinna
ENSACIG00000023762	blm	100	72.014	ENSPMEG00000000321	blm	100	72.277	Poecilia_mexicana
ENSACIG00000023762	blm	100	71.711	ENSPREG00000007715	blm	100	72.155	Poecilia_reticulata
ENSACIG00000023762	blm	56	64.194	ENSPPYG00000006784	BLM	55	64.450	Pongo_abelii
ENSACIG00000023762	blm	59	60.407	ENSPCAG00000008960	BLM	59	60.407	Procavia_capensis
ENSACIG00000023762	blm	77	46.814	ENSPCOG00000000439	BLM	53	56.505	Propithecus_coquereli
ENSACIG00000023762	blm	70	76.744	ENSPVAG00000011642	BLM	59	76.744	Pteropus_vampyrus
ENSACIG00000023762	blm	100	78.409	ENSPNYG00000010956	blm	100	78.267	Pundamilia_nyererei
ENSACIG00000023762	blm	100	57.805	ENSPNAG00000011714	blm	100	57.884	Pygocentrus_nattereri
ENSACIG00000023762	blm	91	61.910	ENSRNOG00000011213	Blm	66	61.803	Rattus_norvegicus
ENSACIG00000023762	blm	73	54.302	ENSRBIG00000029656	BLM	76	75.896	Rhinopithecus_bieti
ENSACIG00000023762	blm	56	64.796	ENSRROG00000037871	BLM	76	75.896	Rhinopithecus_roxellana
ENSACIG00000023762	blm	70	62.191	ENSSHAG00000007988	BLM	70	62.207	Sarcophilus_harrisii
ENSACIG00000023762	blm	74	64.169	ENSSFOG00015015462	blm	91	63.016	Scleropages_formosus
ENSACIG00000023762	blm	100	72.140	ENSSMAG00000001120	blm	100	72.491	Scophthalmus_maximus
ENSACIG00000023762	blm	100	74.547	ENSSDUG00000010955	blm	100	75.174	Seriola_dumerili
ENSACIG00000023762	blm	100	74.616	ENSSLDG00000000634	blm	100	74.965	Seriola_lalandi_dorsalis
ENSACIG00000023762	blm	59	56.905	ENSSARG00000006398	BLM	63	56.750	Sorex_araneus
ENSACIG00000023762	blm	73	53.912	ENSSPUG00000000013	BLM	96	51.755	Sphenodon_punctatus
ENSACIG00000023762	blm	99	78.068	ENSSPAG00000013999	blm	99	78.702	Stegastes_partitus
ENSACIG00000023762	blm	68	62.456	ENSSSCG00000001816	BLM	65	65.548	Sus_scrofa
ENSACIG00000023762	blm	69	54.671	ENSTGUG00000009959	-	83	56.130	Taeniopygia_guttata
ENSACIG00000023762	blm	99	68.124	ENSTRUG00000019860	blm	99	68.195	Takifugu_rubripes
ENSACIG00000023762	blm	99	66.926	ENSTNIG00000019246	blm	99	66.926	Tetraodon_nigroviridis
ENSACIG00000023762	blm	86	65.473	ENSTTRG00000016386	BLM	64	65.473	Tursiops_truncatus
ENSACIG00000023762	blm	65	64.223	ENSUMAG00000009105	BLM	93	68.547	Ursus_maritimus
ENSACIG00000023762	blm	56	61.401	ENSVPAG00000000085	BLM	55	61.509	Vicugna_pacos
ENSACIG00000023762	blm	57	77.236	ENSVVUG00000006402	BLM	61	77.236	Vulpes_vulpes
ENSACIG00000023762	blm	99	47.007	ENSXETG00000007847	blm	55	66.667	Xenopus_tropicalis
ENSACIG00000023762	blm	100	70.601	ENSXCOG00000020227	blm	100	70.763	Xiphophorus_couchianus
ENSACIG00000023762	blm	100	72.003	ENSXMAG00000002951	blm	100	72.155	Xiphophorus_maculatus