EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000023890 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: La ribonucleoprotein domain family%2C member 1B
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 25858 bases
Position: chrCCOE01001647.1:541514-567371
Accession: ZDB-GENE-030131-4154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000030898	La	PF05383.17	3.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000031705	-	3057	-	ENSACIP00000030898	1018 (aa)	-	-

Gene Model

Click here to download ENSACIG00000023890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000023890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000023890	larp1b	92	51.172	ENSACIG00000012994	larp1	92	50.800

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000023890	larp1b	86	52.658	ENSG00000138709	LARP1B	99	52.397	Homo_sapiens
ENSACIG00000023890	larp1b	100	78.420	ENSAPOG00000020101	larp1b	100	78.613	Acanthochromis_polyacanthus
ENSACIG00000023890	larp1b	51	49.483	ENSAMEG00000002748	LARP1B	100	49.483	Ailuropoda_melanoleuca
ENSACIG00000023890	larp1b	90	77.922	ENSAOCG00000014268	larp1b	99	78.355	Amphiprion_ocellaris
ENSACIG00000023890	larp1b	100	78.674	ENSAPEG00000004126	larp1b	100	78.770	Amphiprion_percula
ENSACIG00000023890	larp1b	100	79.693	ENSATEG00000017849	larp1b	100	79.310	Anabas_testudineus
ENSACIG00000023890	larp1b	71	58.978	ENSAPLG00000010129	LARP1B	98	53.493	Anas_platyrhynchos
ENSACIG00000023890	larp1b	82	55.032	ENSACAG00000011338	LARP1B	93	54.777	Anolis_carolinensis
ENSACIG00000023890	larp1b	74	47.945	ENSANAG00000034618	LARP1B	68	55.422	Aotus_nancymaae
ENSACIG00000023890	larp1b	100	81.553	ENSACLG00000011948	larp1b	100	81.553	Astatotilapia_calliptera
ENSACIG00000023890	larp1b	99	55.502	ENSAMXG00000006805	larp1b	90	59.631	Astyanax_mexicanus
ENSACIG00000023890	larp1b	86	54.717	ENSBTAG00000012135	LARP1B	99	47.359	Bos_taurus
ENSACIG00000023890	larp1b	83	53.804	ENSCJAG00000003338	LARP1B	99	56.083	Callithrix_jacchus
ENSACIG00000023890	larp1b	81	59.272	ENSCAFG00000003831	LARP1B	98	59.647	Canis_familiaris
ENSACIG00000023890	larp1b	85	54.784	ENSCAFG00020018899	LARP1B	99	54.784	Canis_lupus_dingo
ENSACIG00000023890	larp1b	85	53.661	ENSCHIG00000023144	LARP1B	95	55.446	Capra_hircus
ENSACIG00000023890	larp1b	83	53.797	ENSCCAG00000021948	LARP1B	97	55.275	Cebus_capucinus
ENSACIG00000023890	larp1b	82	54.189	ENSCATG00000013541	LARP1B	96	54.785	Cercocebus_atys
ENSACIG00000023890	larp1b	82	55.326	ENSCSAG00000003582	LARP1B	97	55.824	Chlorocebus_sabaeus
ENSACIG00000023890	larp1b	82	52.871	ENSCHOG00000005354	LARP1B	96	53.341	Choloepus_hoffmanni
ENSACIG00000023890	larp1b	90	53.801	ENSCPBG00000017480	LARP1B	89	54.527	Chrysemys_picta_bellii
ENSACIG00000023890	larp1b	82	56.174	ENSCANG00000026958	LARP1B	96	56.805	Colobus_angolensis_palliatus
ENSACIG00000023890	larp1b	100	67.748	ENSCSEG00000013519	larp1b	100	67.928	Cynoglossus_semilaevis
ENSACIG00000023890	larp1b	100	80.726	ENSCVAG00000005046	larp1b	94	80.225	Cyprinodon_variegatus
ENSACIG00000023890	larp1b	98	61.069	ENSDARG00000061169	larp1b	95	61.059	Danio_rerio
ENSACIG00000023890	larp1b	65	53.182	ENSETEG00000012497	LARP1B	72	54.479	Echinops_telfairi
ENSACIG00000023890	larp1b	86	44.063	ENSEBUG00000003668	larp1b	95	43.842	Eptatretus_burgeri
ENSACIG00000023890	larp1b	83	55.913	ENSEASG00005018106	LARP1B	99	54.156	Equus_asinus_asinus
ENSACIG00000023890	larp1b	85	54.787	ENSECAG00000001088	LARP1B	84	54.184	Equus_caballus
ENSACIG00000023890	larp1b	77	63.203	ENSELUG00000023774	larp1b	92	63.873	Esox_lucius
ENSACIG00000023890	larp1b	84	52.123	ENSFALG00000008098	LARP1B	96	53.516	Ficedula_albicollis
ENSACIG00000023890	larp1b	100	77.565	ENSFHEG00000010264	larp1b	97	77.085	Fundulus_heteroclitus
ENSACIG00000023890	larp1b	87	68.750	ENSGMOG00000005207	larp1b	80	73.801	Gadus_morhua
ENSACIG00000023890	larp1b	85	52.659	ENSGALG00000010207	LARP1B	91	52.599	Gallus_gallus
ENSACIG00000023890	larp1b	89	81.408	ENSGAFG00000012012	larp1b	96	81.358	Gambusia_affinis
ENSACIG00000023890	larp1b	100	63.986	ENSGACG00000004609	larp1b	100	65.299	Gasterosteus_aculeatus
ENSACIG00000023890	larp1b	90	53.327	ENSGAGG00000017209	LARP1B	89	55.036	Gopherus_agassizii
ENSACIG00000023890	larp1b	82	54.239	ENSGGOG00000015900	LARP1B	96	54.835	Gorilla_gorilla
ENSACIG00000023890	larp1b	100	88.428	ENSHBUG00000009730	larp1b	100	88.428	Haplochromis_burtoni
ENSACIG00000023890	larp1b	66	81.525	ENSHCOG00000000918	larp1b	96	81.471	Hippocampus_comes
ENSACIG00000023890	larp1b	99	60.284	ENSIPUG00000012138	larp1b	93	61.709	Ictalurus_punctatus
ENSACIG00000023890	larp1b	99	73.263	ENSKMAG00000011589	larp1b	100	71.815	Kryptolebias_marmoratus
ENSACIG00000023890	larp1b	100	77.703	ENSLBEG00000005655	larp1b	100	77.512	Labrus_bergylta
ENSACIG00000023890	larp1b	91	55.842	ENSLACG00000015247	LARP1B	88	57.949	Latimeria_chalumnae
ENSACIG00000023890	larp1b	77	63.745	ENSLOCG00000010684	larp1b	89	62.667	Lepisosteus_oculatus
ENSACIG00000023890	larp1b	82	55.169	ENSMFAG00000002218	LARP1B	96	55.776	Macaca_fascicularis
ENSACIG00000023890	larp1b	82	55.169	ENSMMUG00000021347	LARP1B	96	55.776	Macaca_mulatta
ENSACIG00000023890	larp1b	82	53.645	ENSMNEG00000030406	LARP1B	96	54.147	Macaca_nemestrina
ENSACIG00000023890	larp1b	82	55.727	ENSMLEG00000009306	LARP1B	96	56.570	Mandrillus_leucophaeus
ENSACIG00000023890	larp1b	99	79.631	ENSMAMG00000000081	larp1b	99	79.437	Mastacembelus_armatus
ENSACIG00000023890	larp1b	76	88.818	ENSMZEG00005002545	larp1b	100	88.818	Maylandia_zebra
ENSACIG00000023890	larp1b	70	56.192	ENSMGAG00000004809	LARP1B	73	59.084	Meleagris_gallopavo
ENSACIG00000023890	larp1b	82	56.469	ENSMICG00000036111	LARP1B	96	56.984	Microcebus_murinus
ENSACIG00000023890	larp1b	85	55.590	ENSMODG00000012300	LARP1B	90	52.828	Monodelphis_domestica
ENSACIG00000023890	larp1b	100	79.227	ENSMALG00000003638	larp1b	100	79.034	Monopterus_albus
ENSACIG00000023890	larp1b	86	54.669	ENSMPUG00000017365	LARP1B	89	52.404	Mustela_putorius_furo
ENSACIG00000023890	larp1b	81	54.310	ENSMLUG00000010229	LARP1B	98	54.634	Myotis_lucifugus
ENSACIG00000023890	larp1b	93	83.460	ENSNBRG00000023846	larp1b	100	83.480	Neolamprologus_brichardi
ENSACIG00000023890	larp1b	82	54.072	ENSNLEG00000013819	LARP1B	97	54.885	Nomascus_leucogenys
ENSACIG00000023890	larp1b	63	58.746	ENSMEUG00000010308	LARP1B	73	58.884	Notamacropus_eugenii
ENSACIG00000023890	larp1b	75	52.099	ENSOPRG00000005478	LARP1B	76	55.050	Ochotona_princeps
ENSACIG00000023890	larp1b	86	76.142	ENSONIG00000012386	larp1b	100	76.142	Oreochromis_niloticus
ENSACIG00000023890	larp1b	85	53.263	ENSOCUG00000013330	LARP1B	99	53.530	Oryctolagus_cuniculus
ENSACIG00000023890	larp1b	97	73.445	ENSORLG00000017954	larp1b	100	72.100	Oryzias_latipes
ENSACIG00000023890	larp1b	98	68.808	ENSORLG00020013081	larp1b	100	67.792	Oryzias_latipes_hni
ENSACIG00000023890	larp1b	98	73.359	ENSORLG00015009580	larp1b	100	72.196	Oryzias_latipes_hsok
ENSACIG00000023890	larp1b	97	75.124	ENSOMEG00000004210	larp1b	100	74.495	Oryzias_melastigma
ENSACIG00000023890	larp1b	81	56.887	ENSOGAG00000005771	LARP1B	99	57.335	Otolemur_garnettii
ENSACIG00000023890	larp1b	82	54.772	ENSOARG00000015300	LARP1B	96	55.154	Ovis_aries
ENSACIG00000023890	larp1b	82	54.457	ENSPPAG00000030439	LARP1B	96	55.055	Pan_paniscus
ENSACIG00000023890	larp1b	82	54.348	ENSPTRG00000016437	LARP1B	96	54.945	Pan_troglodytes
ENSACIG00000023890	larp1b	82	55.169	ENSPANG00000012488	LARP1B	96	55.776	Papio_anubis
ENSACIG00000023890	larp1b	84	54.628	ENSPKIG00000014360	larp1b	93	55.441	Paramormyrops_kingsleyae
ENSACIG00000023890	larp1b	85	55.191	ENSPSIG00000012885	LARP1B	99	55.074	Pelodiscus_sinensis
ENSACIG00000023890	larp1b	77	71.606	ENSPMGG00000007207	larp1b	95	70.735	Periophthalmus_magnuspinnatus
ENSACIG00000023890	larp1b	65	53.645	ENSPMAG00000002700	larp1b	95	48.401	Petromyzon_marinus
ENSACIG00000023890	larp1b	78	65.571	ENSPCIG00000026516	LARP1B	93	63.122	Phascolarctos_cinereus
ENSACIG00000023890	larp1b	100	70.745	ENSPFOG00000019519	larp1b	100	70.745	Poecilia_formosa
ENSACIG00000023890	larp1b	61	78.446	ENSPFOG00000022837	-	91	78.446	Poecilia_formosa
ENSACIG00000023890	larp1b	100	72.389	ENSPLAG00000007115	larp1b	100	72.389	Poecilia_latipinna
ENSACIG00000023890	larp1b	100	77.820	ENSPMEG00000001224	larp1b	100	77.820	Poecilia_mexicana
ENSACIG00000023890	larp1b	83	52.671	ENSPCAG00000007546	LARP1B	96	53.965	Procavia_capensis
ENSACIG00000023890	larp1b	72	65.323	ENSPCOG00000021874	LARP1B	95	68.421	Propithecus_coquereli
ENSACIG00000023890	larp1b	82	51.106	ENSPVAG00000005373	LARP1B	76	59.110	Pteropus_vampyrus
ENSACIG00000023890	larp1b	76	89.141	ENSPNYG00000017357	larp1b	100	89.141	Pundamilia_nyererei
ENSACIG00000023890	larp1b	94	60.159	ENSPNAG00000008823	larp1b	90	64.094	Pygocentrus_nattereri
ENSACIG00000023890	larp1b	82	55.169	ENSRROG00000030771	LARP1B	96	55.776	Rhinopithecus_roxellana
ENSACIG00000023890	larp1b	59	50.000	ENSSHAG00000014474	LARP1B	99	50.576	Sarcophilus_harrisii
ENSACIG00000023890	larp1b	81	81.279	ENSSMAG00000006347	larp1b	95	78.758	Scophthalmus_maximus
ENSACIG00000023890	larp1b	100	80.403	ENSSDUG00000004182	larp1b	100	80.980	Seriola_dumerili
ENSACIG00000023890	larp1b	98	73.294	ENSSLDG00000014613	larp1b	100	73.195	Seriola_lalandi_dorsalis
ENSACIG00000023890	larp1b	76	60.358	ENSSPUG00000011837	LARP1B	77	64.222	Sphenodon_punctatus
ENSACIG00000023890	larp1b	100	76.944	ENSSPAG00000017772	larp1b	100	77.222	Stegastes_partitus
ENSACIG00000023890	larp1b	89	52.653	ENSSSCG00000034280	LARP1B	99	77.778	Sus_scrofa
ENSACIG00000023890	larp1b	73	59.278	ENSTGUG00000002098	-	95	56.796	Taeniopygia_guttata
ENSACIG00000023890	larp1b	99	72.860	ENSTRUG00000005612	larp1b	99	72.886	Takifugu_rubripes
ENSACIG00000023890	larp1b	89	73.599	ENSTNIG00000012398	larp1b	100	73.815	Tetraodon_nigroviridis
ENSACIG00000023890	larp1b	62	52.381	ENSTBEG00000004177	LARP1B	73	51.739	Tupaia_belangeri
ENSACIG00000023890	larp1b	73	57.803	ENSTTRG00000012984	LARP1B	78	58.583	Tursiops_truncatus
ENSACIG00000023890	larp1b	85	54.689	ENSUMAG00000007373	LARP1B	95	56.430	Ursus_maritimus
ENSACIG00000023890	larp1b	66	54.772	ENSVPAG00000007223	LARP1B	76	55.119	Vicugna_pacos
ENSACIG00000023890	larp1b	85	55.216	ENSVVUG00000011307	LARP1B	99	55.431	Vulpes_vulpes
ENSACIG00000023890	larp1b	90	49.848	ENSXETG00000022512	larp1b	93	51.420	Xenopus_tropicalis
ENSACIG00000023890	larp1b	90	73.149	ENSXCOG00000004435	larp1b	96	72.236	Xiphophorus_couchianus
ENSACIG00000023890	larp1b	100	81.468	ENSXMAG00000008150	larp1b	100	75.933	Xiphophorus_maculatus