EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000024058 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-93g23.2
Alias: -
Full Name: si:ch211-93g23.2
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 826 bases
Position: chrCCOE01001309.1:344262-345087
Accession: ZDB-GENE-090312-164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000031125	tRNA_U5-meth_tr	PF05958.11	0.00044	1	1
ENSACIP00000031125	Methyltransf_31	PF13847.6	5.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000031939	-	564	-	ENSACIP00000031125	187 (aa)	-	-

Gene Model

Click here to download ENSACIG00000024058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000024058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000024058	si:ch211-93g23.2	87	59.394	ENSACIG00000015409	zgc:162780	59	59.394
ENSACIG00000024058	si:ch211-93g23.2	87	51.829	ENSACIG00000015427	zgc:162396	60	51.829

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000024058	si:ch211-93g23.2	87	76.687	ENSAPOG00000008054	si:ch211-93g23.2	60	76.687	Acanthochromis_polyacanthus
ENSACIG00000024058	si:ch211-93g23.2	87	61.212	ENSAPOG00000015391	zgc:162780	60	61.212	Acanthochromis_polyacanthus
ENSACIG00000024058	si:ch211-93g23.2	87	60.606	ENSAOCG00000004147	zgc:162780	60	60.606	Amphiprion_ocellaris
ENSACIG00000024058	si:ch211-93g23.2	98	68.367	ENSAOCG00000000447	-	70	68.367	Amphiprion_ocellaris
ENSACIG00000024058	si:ch211-93g23.2	87	76.543	ENSAPEG00000012843	si:ch211-93g23.2	99	76.543	Amphiprion_percula
ENSACIG00000024058	si:ch211-93g23.2	87	59.394	ENSAPEG00000008212	zgc:162780	60	59.394	Amphiprion_percula
ENSACIG00000024058	si:ch211-93g23.2	87	60.000	ENSATEG00000011843	zgc:162780	60	60.000	Anabas_testudineus
ENSACIG00000024058	si:ch211-93g23.2	87	89.571	ENSACLG00000009543	si:ch211-93g23.2	60	89.571	Astatotilapia_calliptera
ENSACIG00000024058	si:ch211-93g23.2	87	58.182	ENSACLG00000006922	zgc:162780	60	58.182	Astatotilapia_calliptera
ENSACIG00000024058	si:ch211-93g23.2	87	62.424	ENSAMXG00000040257	zgc:162780	60	62.424	Astyanax_mexicanus
ENSACIG00000024058	si:ch211-93g23.2	87	58.788	ENSCVAG00000021445	zgc:162780	60	58.788	Cyprinodon_variegatus
ENSACIG00000024058	si:ch211-93g23.2	89	72.289	ENSCVAG00000012310	si:ch211-93g23.2	100	72.289	Cyprinodon_variegatus
ENSACIG00000024058	si:ch211-93g23.2	87	64.634	ENSDARG00000069548	zgc:162780	60	64.634	Danio_rerio
ENSACIG00000024058	si:ch211-93g23.2	87	62.805	ENSDARG00000070558	si:ch211-93g23.2	60	62.805	Danio_rerio
ENSACIG00000024058	si:ch211-93g23.2	87	61.212	ENSELUG00000005357	zgc:162780	69	61.538	Esox_lucius
ENSACIG00000024058	si:ch211-93g23.2	66	62.097	ENSELUG00000002477	si:ch211-93g23.2	79	62.097	Esox_lucius
ENSACIG00000024058	si:ch211-93g23.2	87	56.970	ENSFHEG00000005204	zgc:162780	60	56.970	Fundulus_heteroclitus
ENSACIG00000024058	si:ch211-93g23.2	65	65.041	ENSGMOG00000005502	zgc:162780	53	65.041	Gadus_morhua
ENSACIG00000024058	si:ch211-93g23.2	89	56.213	ENSGAFG00000018382	zgc:162780	60	56.970	Gambusia_affinis
ENSACIG00000024058	si:ch211-93g23.2	87	61.350	ENSGAFG00000007683	si:ch211-93g23.2	58	61.350	Gambusia_affinis
ENSACIG00000024058	si:ch211-93g23.2	87	75.758	ENSGACG00000014722	si:ch211-93g23.2	60	75.758	Gasterosteus_aculeatus
ENSACIG00000024058	si:ch211-93g23.2	87	89.571	ENSHBUG00000004418	si:ch211-93g23.2	95	89.091	Haplochromis_burtoni
ENSACIG00000024058	si:ch211-93g23.2	87	58.182	ENSHBUG00000000524	zgc:162780	60	58.182	Haplochromis_burtoni
ENSACIG00000024058	si:ch211-93g23.2	87	62.963	ENSHCOG00000009980	si:ch211-93g23.2	96	61.935	Hippocampus_comes
ENSACIG00000024058	si:ch211-93g23.2	87	58.788	ENSKMAG00000018418	zgc:162780	59	58.788	Kryptolebias_marmoratus
ENSACIG00000024058	si:ch211-93g23.2	87	76.687	ENSLBEG00000013961	si:ch211-93g23.2	90	77.215	Labrus_bergylta
ENSACIG00000024058	si:ch211-93g23.2	87	61.818	ENSLBEG00000026521	zgc:162780	60	61.818	Labrus_bergylta
ENSACIG00000024058	si:ch211-93g23.2	87	77.914	ENSLBEG00000006987	-	60	77.914	Labrus_bergylta
ENSACIG00000024058	si:ch211-93g23.2	91	59.538	ENSMAMG00000013237	zgc:162780	63	59.538	Mastacembelus_armatus
ENSACIG00000024058	si:ch211-93g23.2	87	89.571	ENSMZEG00005014627	si:ch211-93g23.2	60	89.571	Maylandia_zebra
ENSACIG00000024058	si:ch211-93g23.2	87	58.182	ENSMZEG00005000825	zgc:162780	60	58.182	Maylandia_zebra
ENSACIG00000024058	si:ch211-93g23.2	87	72.840	ENSMMOG00000019634	si:ch211-93g23.2	95	72.840	Mola_mola
ENSACIG00000024058	si:ch211-93g23.2	87	58.788	ENSMALG00000012598	zgc:162780	60	58.788	Monopterus_albus
ENSACIG00000024058	si:ch211-93g23.2	87	56.970	ENSNBRG00000014908	zgc:162780	59	56.970	Neolamprologus_brichardi
ENSACIG00000024058	si:ch211-93g23.2	87	88.957	ENSNBRG00000019105	si:ch211-93g23.2	94	87.273	Neolamprologus_brichardi
ENSACIG00000024058	si:ch211-93g23.2	87	88.957	ENSONIG00000013383	si:ch211-93g23.2	60	88.957	Oreochromis_niloticus
ENSACIG00000024058	si:ch211-93g23.2	87	58.182	ENSONIG00000004462	zgc:162780	60	58.182	Oreochromis_niloticus
ENSACIG00000024058	si:ch211-93g23.2	87	74.847	ENSORLG00000002372	si:ch211-93g23.2	60	74.847	Oryzias_latipes
ENSACIG00000024058	si:ch211-93g23.2	87	75.460	ENSORLG00020022021	si:ch211-93g23.2	60	75.460	Oryzias_latipes_hni
ENSACIG00000024058	si:ch211-93g23.2	87	61.212	ENSORLG00015008510	zgc:162780	60	61.212	Oryzias_latipes_hsok
ENSACIG00000024058	si:ch211-93g23.2	87	76.074	ENSORLG00015021473	si:ch211-93g23.2	60	76.074	Oryzias_latipes_hsok
ENSACIG00000024058	si:ch211-93g23.2	87	75.460	ENSOMEG00000013365	si:ch211-93g23.2	60	75.460	Oryzias_melastigma
ENSACIG00000024058	si:ch211-93g23.2	87	60.000	ENSOMEG00000010679	zgc:162780	60	60.000	Oryzias_melastigma
ENSACIG00000024058	si:ch211-93g23.2	87	60.976	ENSPKIG00000011610	si:ch211-93g23.2	60	60.976	Paramormyrops_kingsleyae
ENSACIG00000024058	si:ch211-93g23.2	87	66.871	ENSPMGG00000011829	si:ch211-93g23.2	96	66.871	Periophthalmus_magnuspinnatus
ENSACIG00000024058	si:ch211-93g23.2	87	71.166	ENSPFOG00000013857	si:ch211-93g23.2	60	71.166	Poecilia_formosa
ENSACIG00000024058	si:ch211-93g23.2	87	58.182	ENSPFOG00000002781	zgc:162780	60	58.182	Poecilia_formosa
ENSACIG00000024058	si:ch211-93g23.2	89	69.277	ENSPLAG00000015878	-	100	69.277	Poecilia_latipinna
ENSACIG00000024058	si:ch211-93g23.2	87	58.182	ENSPLAG00000010255	zgc:162780	60	58.182	Poecilia_latipinna
ENSACIG00000024058	si:ch211-93g23.2	87	58.182	ENSPMEG00000000022	zgc:162780	62	58.182	Poecilia_mexicana
ENSACIG00000024058	si:ch211-93g23.2	89	69.277	ENSPMEG00000008837	-	100	69.277	Poecilia_mexicana
ENSACIG00000024058	si:ch211-93g23.2	89	56.213	ENSPREG00000016480	zgc:162780	60	56.213	Poecilia_reticulata
ENSACIG00000024058	si:ch211-93g23.2	89	70.482	ENSPREG00000016831	si:ch211-93g23.2	100	70.482	Poecilia_reticulata
ENSACIG00000024058	si:ch211-93g23.2	87	57.576	ENSPNYG00000009882	zgc:162780	60	57.576	Pundamilia_nyererei
ENSACIG00000024058	si:ch211-93g23.2	87	88.957	ENSPNYG00000009369	si:ch211-93g23.2	95	88.485	Pundamilia_nyererei
ENSACIG00000024058	si:ch211-93g23.2	87	57.317	ENSPNAG00000026108	zgc:162780	58	57.317	Pygocentrus_nattereri
ENSACIG00000024058	si:ch211-93g23.2	87	54.878	ENSSFOG00015018587	si:ch211-93g23.2	60	54.878	Scleropages_formosus
ENSACIG00000024058	si:ch211-93g23.2	87	60.000	ENSSMAG00000004498	zgc:162780	60	60.000	Scophthalmus_maximus
ENSACIG00000024058	si:ch211-93g23.2	87	79.012	ENSSDUG00000022311	si:ch211-93g23.2	99	79.012	Seriola_dumerili
ENSACIG00000024058	si:ch211-93g23.2	87	58.788	ENSSDUG00000010324	zgc:162780	59	58.788	Seriola_dumerili
ENSACIG00000024058	si:ch211-93g23.2	87	78.528	ENSSLDG00000005926	si:ch211-93g23.2	60	78.528	Seriola_lalandi_dorsalis
ENSACIG00000024058	si:ch211-93g23.2	99	53.807	ENSSLDG00000021444	zgc:162780	74	53.807	Seriola_lalandi_dorsalis
ENSACIG00000024058	si:ch211-93g23.2	87	72.393	ENSSPAG00000014251	si:ch211-93g23.2	92	72.393	Stegastes_partitus
ENSACIG00000024058	si:ch211-93g23.2	87	71.166	ENSTRUG00000014609	si:ch211-93g23.2	60	71.166	Takifugu_rubripes
ENSACIG00000024058	si:ch211-93g23.2	87	75.460	ENSTNIG00000000686	-	60	75.460	Tetraodon_nigroviridis
ENSACIG00000024058	si:ch211-93g23.2	87	56.364	ENSXCOG00000014527	zgc:162780	60	56.364	Xiphophorus_couchianus
ENSACIG00000024058	si:ch211-93g23.2	89	66.265	ENSXCOG00000020437	si:ch211-93g23.2	100	66.265	Xiphophorus_couchianus
ENSACIG00000024058	si:ch211-93g23.2	87	69.325	ENSXMAG00000007855	si:ch211-93g23.2	60	69.325	Xiphophorus_maculatus
ENSACIG00000024058	si:ch211-93g23.2	87	56.364	ENSXMAG00000026715	zgc:162780	60	56.364	Xiphophorus_maculatus