EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000024185 (Gene tree)
Gene ID: -
Gene Symbol: secisbp2
Alias: im:7147048|si:ch211-261c8.1
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 5367 bases
Position: chrCCOE01000128.1:75367-80733
Accession: ZDB-GENE-050208-263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000031294	Ribosomal_L7Ae	PF01248.26	5.6e-20	1	1
ENSACIP00000031295	Ribosomal_L7Ae	PF01248.26	6.6e-20	1	1
ENSACIP00000031293	Ribosomal_L7Ae	PF01248.26	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000032114	-	1428	-	ENSACIP00000031294	475 (aa)	-	-
ENSACIT00000032115	-	1524	-	ENSACIP00000031295	507 (aa)	-	-
ENSACIT00000032112	-	1659	-	ENSACIP00000031293	552 (aa)	-	-

Gene Model

Click here to download ENSACIG00000024185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000024185's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000024185	secisbp2	67	48.459	ENSG00000138593	SECISBP2L	56	47.472	Homo_sapiens
ENSACIG00000024185	secisbp2	65	58.480	ENSG00000187742	SECISBP2	54	49.065	Homo_sapiens
ENSACIG00000024185	secisbp2	87	71.576	ENSAPOG00000005939	secisbp2	65	71.576	Acanthochromis_polyacanthus
ENSACIG00000024185	secisbp2	87	71.649	ENSAOCG00000019052	secisbp2	58	71.649	Amphiprion_ocellaris
ENSACIG00000024185	secisbp2	87	71.649	ENSAPEG00000012971	secisbp2	68	63.333	Amphiprion_percula
ENSACIG00000024185	secisbp2	87	69.231	ENSATEG00000001095	secisbp2	57	69.231	Anabas_testudineus
ENSACIG00000024185	secisbp2	87	76.190	ENSACLG00000019976	secisbp2	69	66.168	Astatotilapia_calliptera
ENSACIG00000024185	secisbp2	76	64.286	ENSAMXG00000015953	secisbp2	50	58.376	Astyanax_mexicanus
ENSACIG00000024185	secisbp2	82	50.971	ENSBTAG00000001939	SECISBP2	57	50.971	Bos_taurus
ENSACIG00000024185	secisbp2	82	50.594	ENSCAFG00000002188	SECISBP2	50	50.594	Canis_familiaris
ENSACIG00000024185	secisbp2	72	53.005	ENSCAPG00000008522	SECISBP2	53	53.552	Cavia_aperea
ENSACIG00000024185	secisbp2	69	54.930	ENSCATG00000008304	SECISBP2	53	50.714	Cercocebus_atys
ENSACIG00000024185	secisbp2	93	47.071	ENSCPBG00000005608	SECISBP2	96	44.094	Chrysemys_picta_bellii
ENSACIG00000024185	secisbp2	71	54.286	ENSCANG00000034551	SECISBP2	53	50.118	Colobus_angolensis_palliatus
ENSACIG00000024185	secisbp2	74	58.357	ENSCSEG00000010220	-	95	58.357	Cynoglossus_semilaevis
ENSACIG00000024185	secisbp2	91	65.252	ENSCVAG00000015876	secisbp2	64	65.252	Cyprinodon_variegatus
ENSACIG00000024185	secisbp2	96	53.385	ENSDARG00000073892	secisbp2	93	53.385	Danio_rerio
ENSACIG00000024185	secisbp2	62	31.373	FBgn0087039	Sbp2	58	32.240	Drosophila_melanogaster
ENSACIG00000024185	secisbp2	66	43.109	ENSEBUG00000008208	secisbp2	89	42.815	Eptatretus_burgeri
ENSACIG00000024185	secisbp2	82	50.957	ENSEASG00005013960	SECISBP2	50	50.957	Equus_asinus_asinus
ENSACIG00000024185	secisbp2	82	50.708	ENSECAG00000015868	SECISBP2	50	50.708	Equus_caballus
ENSACIG00000024185	secisbp2	87	54.048	ENSELUG00000014795	-	96	53.811	Esox_lucius
ENSACIG00000024185	secisbp2	78	49.871	ENSFCAG00000004214	SECISBP2	50	51.100	Felis_catus
ENSACIG00000024185	secisbp2	87	64.858	ENSFHEG00000004095	secisbp2	59	64.858	Fundulus_heteroclitus
ENSACIG00000024185	secisbp2	55	76.744	ENSGMOG00000017234	secisbp2	53	78.125	Gadus_morhua
ENSACIG00000024185	secisbp2	80	68.611	ENSGAFG00000016947	secisbp2	54	68.611	Gambusia_affinis
ENSACIG00000024185	secisbp2	93	60.355	ENSGACG00000013757	secisbp2	84	60.750	Gasterosteus_aculeatus
ENSACIG00000024185	secisbp2	74	53.030	ENSGGOG00000000453	SECISBP2	53	50.827	Gorilla_gorilla
ENSACIG00000024185	secisbp2	76	80.526	ENSHBUG00000007014	secisbp2	93	80.526	Haplochromis_burtoni
ENSACIG00000024185	secisbp2	65	70.093	ENSHCOG00000008010	secisbp2	60	58.993	Hippocampus_comes
ENSACIG00000024185	secisbp2	81	68.421	ENSKMAG00000007129	secisbp2	64	64.000	Kryptolebias_marmoratus
ENSACIG00000024185	secisbp2	87	68.312	ENSLBEG00000026023	secisbp2	56	68.312	Labrus_bergylta
ENSACIG00000024185	secisbp2	83	47.059	ENSLACG00000005735	SECISBP2	81	50.688	Latimeria_chalumnae
ENSACIG00000024185	secisbp2	76	66.057	ENSLOCG00000011742	secisbp2	66	66.057	Lepisosteus_oculatus
ENSACIG00000024185	secisbp2	69	54.775	ENSMFAG00000003045	SECISBP2	53	50.714	Macaca_fascicularis
ENSACIG00000024185	secisbp2	69	54.775	ENSMNEG00000031737	SECISBP2	53	50.714	Macaca_nemestrina
ENSACIG00000024185	secisbp2	68	55.587	ENSMLEG00000028868	SECISBP2	53	50.476	Mandrillus_leucophaeus
ENSACIG00000024185	secisbp2	87	67.358	ENSMAMG00000006644	secisbp2	58	67.358	Mastacembelus_armatus
ENSACIG00000024185	secisbp2	87	76.190	ENSMZEG00005013614	secisbp2	69	66.168	Maylandia_zebra
ENSACIG00000024185	secisbp2	91	62.256	ENSMMOG00000017977	secisbp2	96	62.473	Mola_mola
ENSACIG00000024185	secisbp2	86	68.462	ENSMALG00000004907	secisbp2	60	68.462	Monopterus_albus
ENSACIG00000024185	secisbp2	67	47.778	MGP_CAROLIEiJ_G0024231	Secisbp2l	74	49.074	Mus_caroli
ENSACIG00000024185	secisbp2	67	47.778	ENSMUSG00000035093	Secisbp2l	74	49.074	Mus_musculus
ENSACIG00000024185	secisbp2	67	47.500	MGP_PahariEiJ_G0025677	Secisbp2l	74	48.765	Mus_pahari
ENSACIG00000024185	secisbp2	67	47.778	MGP_SPRETEiJ_G0025151	Secisbp2l	74	49.074	Mus_spretus
ENSACIG00000024185	secisbp2	79	50.378	ENSMPUG00000008495	-	71	50.378	Mustela_putorius_furo
ENSACIG00000024185	secisbp2	87	75.263	ENSNBRG00000022804	secisbp2	69	65.736	Neolamprologus_brichardi
ENSACIG00000024185	secisbp2	69	55.153	ENSNLEG00000008739	SECISBP2	53	51.064	Nomascus_leucogenys
ENSACIG00000024185	secisbp2	93	69.815	ENSONIG00000016931	secisbp2	94	81.768	Oreochromis_niloticus
ENSACIG00000024185	secisbp2	83	62.924	ENSORLG00000000343	secisbp2	67	62.924	Oryzias_latipes
ENSACIG00000024185	secisbp2	83	62.402	ENSORLG00020012878	secisbp2	66	62.402	Oryzias_latipes_hni
ENSACIG00000024185	secisbp2	84	62.402	ENSORLG00015004559	secisbp2	60	62.402	Oryzias_latipes_hsok
ENSACIG00000024185	secisbp2	95	57.760	ENSOMEG00000008595	secisbp2	53	70.588	Oryzias_melastigma
ENSACIG00000024185	secisbp2	74	52.868	ENSPPAG00000012385	SECISBP2	53	50.827	Pan_paniscus
ENSACIG00000024185	secisbp2	74	53.283	ENSPTRG00000021094	SECISBP2	53	50.827	Pan_troglodytes
ENSACIG00000024185	secisbp2	69	54.494	ENSPANG00000024873	SECISBP2	53	50.476	Papio_anubis
ENSACIG00000024185	secisbp2	78	52.555	ENSPSIG00000016257	SECISBP2	60	44.356	Pelodiscus_sinensis
ENSACIG00000024185	secisbp2	53	45.255	ENSPMAG00000002525	-	88	35.469	Petromyzon_marinus
ENSACIG00000024185	secisbp2	95	57.624	ENSPFOG00000008146	secisbp2	79	59.708	Poecilia_formosa
ENSACIG00000024185	secisbp2	76	68.193	ENSPLAG00000004505	secisbp2	91	67.332	Poecilia_latipinna
ENSACIG00000024185	secisbp2	80	68.333	ENSPMEG00000013702	secisbp2	55	68.333	Poecilia_mexicana
ENSACIG00000024185	secisbp2	84	65.039	ENSPREG00000008117	secisbp2	58	65.039	Poecilia_reticulata
ENSACIG00000024185	secisbp2	87	76.190	ENSPNYG00000016799	secisbp2	69	66.168	Pundamilia_nyererei
ENSACIG00000024185	secisbp2	76	62.113	ENSPNAG00000029922	secisbp2	53	62.113	Pygocentrus_nattereri
ENSACIG00000024185	secisbp2	68	56.111	ENSRROG00000030742	SECISBP2	55	50.476	Rhinopithecus_roxellana
ENSACIG00000024185	secisbp2	71	54.712	ENSSBOG00000015392	SECISBP2	58	50.000	Saimiri_boliviensis_boliviensis
ENSACIG00000024185	secisbp2	70	53.175	ENSSHAG00000005947	SECISBP2	51	49.220	Sarcophilus_harrisii
ENSACIG00000024185	secisbp2	96	58.036	ENSSMAG00000008472	secisbp2	85	57.829	Scophthalmus_maximus
ENSACIG00000024185	secisbp2	87	69.271	ENSSDUG00000002089	secisbp2	60	69.271	Seriola_dumerili
ENSACIG00000024185	secisbp2	86	69.430	ENSSLDG00000003510	secisbp2	68	59.598	Seriola_lalandi_dorsalis
ENSACIG00000024185	secisbp2	72	53.600	ENSSPUG00000009635	SECISBP2	50	53.600	Sphenodon_punctatus
ENSACIG00000024185	secisbp2	85	70.918	ENSSPAG00000013606	secisbp2	58	70.918	Stegastes_partitus
ENSACIG00000024185	secisbp2	72	55.080	ENSTGUG00000000440	SECISBP2	69	54.933	Taeniopygia_guttata
ENSACIG00000024185	secisbp2	82	66.234	ENSTRUG00000016835	secisbp2	60	66.234	Takifugu_rubripes
ENSACIG00000024185	secisbp2	88	60.934	ENSTNIG00000015576	secisbp2	98	61.255	Tetraodon_nigroviridis
ENSACIG00000024185	secisbp2	82	50.119	ENSUAMG00000016243	SECISBP2	54	50.358	Ursus_americanus
ENSACIG00000024185	secisbp2	82	49.633	ENSUMAG00000016261	SECISBP2	53	48.926	Ursus_maritimus
ENSACIG00000024185	secisbp2	72	53.639	ENSVVUG00000022278	SECISBP2	52	49.292	Vulpes_vulpes
ENSACIG00000024185	secisbp2	87	46.458	ENSXETG00000029955	SECISBP2	73	49.392	Xenopus_tropicalis
ENSACIG00000024185	secisbp2	87	58.936	ENSXCOG00000009547	secisbp2	88	56.476	Xiphophorus_couchianus
ENSACIG00000024185	secisbp2	84	64.267	ENSXMAG00000003090	secisbp2	58	64.267	Xiphophorus_maculatus