EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000024479 (Gene tree)
Gene ID: -
Gene Symbol: pus3
Alias: fj78b12|wu:fj78b12|zgc:56653
Full Name: pseudouridylate synthase 3
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 8550 bases
Position: chrCCOE01000650.1:517484-526033
Accession: ZDB-GENE-030131-9433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000031687	PseudoU_synth_1	PF01416.20	9.5e-25	1	1
ENSACIP00000031688	PseudoU_synth_1	PF01416.20	7.1e-24	1	1
ENSACIP00000031686	PseudoU_synth_1	PF01416.20	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000032518	-	915	-	ENSACIP00000031688	304 (aa)	-	-
ENSACIT00000032519	-	873	-	ENSACIP00000031689	290 (aa)	-	-
ENSACIT00000032516	-	1134	-	ENSACIP00000031686	378 (aa)	-	-
ENSACIT00000032517	-	1095	-	ENSACIP00000031687	364 (aa)	-	-

Gene Model

Click here to download ENSACIG00000024479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000024479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000024479	pus3	99	57.278	ENSG00000110060	PUS3	98	55.556	Homo_sapiens
ENSACIG00000024479	pus3	100	92.857	ENSAPOG00000019483	pus3	80	92.857	Acanthochromis_polyacanthus
ENSACIG00000024479	pus3	97	56.774	ENSAMEG00000000144	PUS3	63	61.314	Ailuropoda_melanoleuca
ENSACIG00000024479	pus3	100	91.071	ENSAOCG00000006589	pus3	79	91.071	Amphiprion_ocellaris
ENSACIG00000024479	pus3	100	91.071	ENSAPEG00000014617	pus3	79	91.071	Amphiprion_percula
ENSACIG00000024479	pus3	100	96.429	ENSATEG00000022731	pus3	78	96.429	Anabas_testudineus
ENSACIG00000024479	pus3	98	56.563	ENSAPLG00000013285	PUS3	73	61.765	Anas_platyrhynchos
ENSACIG00000024479	pus3	96	61.111	ENSACAG00000000186	PUS3	73	60.000	Anolis_carolinensis
ENSACIG00000024479	pus3	99	55.556	ENSANAG00000035614	PUS3	65	60.000	Aotus_nancymaae
ENSACIG00000024479	pus3	100	94.643	ENSACLG00000007356	pus3	80	94.643	Astatotilapia_calliptera
ENSACIG00000024479	pus3	100	69.863	ENSAMXG00000019534	pus3	81	67.802	Astyanax_mexicanus
ENSACIG00000024479	pus3	99	54.859	ENSBTAG00000014339	PUS3	65	60.000	Bos_taurus
ENSACIG00000024479	pus3	89	41.328	WBGene00006473	tag-124	75	39.088	Caenorhabditis_elegans
ENSACIG00000024479	pus3	99	55.873	ENSCJAG00000046645	PUS3	65	60.000	Callithrix_jacchus
ENSACIG00000024479	pus3	99	54.545	ENSCAFG00000010534	PUS3	65	62.857	Canis_familiaris
ENSACIG00000024479	pus3	99	54.545	ENSCAFG00020010659	PUS3	65	62.857	Canis_lupus_dingo
ENSACIG00000024479	pus3	99	55.380	ENSCHIG00000012260	PUS3	64	60.000	Capra_hircus
ENSACIG00000024479	pus3	99	57.053	ENSTSYG00000014744	PUS3	65	60.000	Carlito_syrichta
ENSACIG00000024479	pus3	99	56.329	ENSCAPG00000012231	PUS3	65	65.714	Cavia_aperea
ENSACIG00000024479	pus3	99	56.329	ENSCPOG00000032587	PUS3	65	65.714	Cavia_porcellus
ENSACIG00000024479	pus3	99	55.660	ENSCCAG00000035999	PUS3	65	60.000	Cebus_capucinus
ENSACIG00000024479	pus3	99	57.278	ENSCATG00000043123	PUS3	69	60.000	Cercocebus_atys
ENSACIG00000024479	pus3	99	57.053	ENSCLAG00000014947	PUS3	65	62.857	Chinchilla_lanigera
ENSACIG00000024479	pus3	99	57.911	ENSCSAG00000002281	PUS3	69	60.000	Chlorocebus_sabaeus
ENSACIG00000024479	pus3	99	54.114	ENSCHOG00000008442	PUS3	86	50.435	Choloepus_hoffmanni
ENSACIG00000024479	pus3	85	38.298	ENSCING00000009062	-	60	36.538	Ciona_intestinalis
ENSACIG00000024479	pus3	93	42.807	ENSCSAVG00000002211	-	67	42.810	Ciona_savignyi
ENSACIG00000024479	pus3	99	57.278	ENSCANG00000038729	PUS3	63	61.679	Colobus_angolensis_palliatus
ENSACIG00000024479	pus3	99	56.740	ENSCGRG00001019842	Pus3	67	62.857	Cricetulus_griseus_chok1gshd
ENSACIG00000024479	pus3	99	56.740	ENSCGRG00000010155	Pus3	67	62.857	Cricetulus_griseus_crigri
ENSACIG00000024479	pus3	100	83.929	ENSCSEG00000007948	pus3	79	83.929	Cynoglossus_semilaevis
ENSACIG00000024479	pus3	100	82.143	ENSCVAG00000022150	pus3	79	82.143	Cyprinodon_variegatus
ENSACIG00000024479	pus3	100	77.193	ENSDARG00000028976	pus3	79	70.181	Danio_rerio
ENSACIG00000024479	pus3	99	54.259	ENSDNOG00000040719	PUS3	66	57.143	Dasypus_novemcinctus
ENSACIG00000024479	pus3	99	57.278	ENSDORG00000001819	Pus3	69	60.000	Dipodomys_ordii
ENSACIG00000024479	pus3	88	51.481	FBgn0034703	CG3045	55	49.826	Drosophila_melanogaster
ENSACIG00000024479	pus3	97	48.387	ENSETEG00000013067	PUS3	65	60.000	Echinops_telfairi
ENSACIG00000024479	pus3	97	56.958	ENSEASG00005023003	PUS3	66	60.000	Equus_asinus_asinus
ENSACIG00000024479	pus3	97	57.282	ENSECAG00000007581	PUS3	66	60.000	Equus_caballus
ENSACIG00000024479	pus3	99	56.467	ENSEEUG00000010543	PUS3	68	57.143	Erinaceus_europaeus
ENSACIG00000024479	pus3	100	85.714	ENSELUG00000004425	pus3	79	85.714	Esox_lucius
ENSACIG00000024479	pus3	99	54.969	ENSFCAG00000005340	PUS3	63	60.000	Felis_catus
ENSACIG00000024479	pus3	98	58.360	ENSFALG00000005159	PUS3	70	60.000	Ficedula_albicollis
ENSACIG00000024479	pus3	99	57.278	ENSFDAG00000020745	PUS3	65	60.000	Fukomys_damarensis
ENSACIG00000024479	pus3	100	87.500	ENSFHEG00000010984	pus3	73	87.500	Fundulus_heteroclitus
ENSACIG00000024479	pus3	100	83.929	ENSGMOG00000004534	pus3	81	83.929	Gadus_morhua
ENSACIG00000024479	pus3	96	60.526	ENSGALG00000000962	PUS3	73	64.706	Gallus_gallus
ENSACIG00000024479	pus3	100	87.500	ENSGAFG00000005615	pus3	79	87.500	Gambusia_affinis
ENSACIG00000024479	pus3	100	89.286	ENSGACG00000002125	pus3	77	89.286	Gasterosteus_aculeatus
ENSACIG00000024479	pus3	95	63.889	ENSGAGG00000000160	PUS3	72	62.857	Gopherus_agassizii
ENSACIG00000024479	pus3	99	56.962	ENSGGOG00000015047	PUS3	65	60.000	Gorilla_gorilla
ENSACIG00000024479	pus3	100	94.643	ENSHBUG00000016532	pus3	80	94.643	Haplochromis_burtoni
ENSACIG00000024479	pus3	99	51.899	ENSHGLG00000006599	-	64	51.899	Heterocephalus_glaber_female
ENSACIG00000024479	pus3	99	49.051	ENSHGLG00000018861	-	68	49.051	Heterocephalus_glaber_female
ENSACIG00000024479	pus3	99	54.817	ENSHGLG00000015753	-	83	53.205	Heterocephalus_glaber_female
ENSACIG00000024479	pus3	95	61.111	ENSHGLG00000000565	PUS3	69	60.000	Heterocephalus_glaber_female
ENSACIG00000024479	pus3	99	55.263	ENSHGLG00100014825	-	66	57.651	Heterocephalus_glaber_male
ENSACIG00000024479	pus3	97	51.603	ENSHGLG00100007519	-	70	51.603	Heterocephalus_glaber_male
ENSACIG00000024479	pus3	99	47.525	ENSHGLG00100011339	-	66	47.569	Heterocephalus_glaber_male
ENSACIG00000024479	pus3	99	55.738	ENSHGLG00100008656	-	99	56.066	Heterocephalus_glaber_male
ENSACIG00000024479	pus3	91	53.357	ENSHGLG00100002435	-	99	53.357	Heterocephalus_glaber_male
ENSACIG00000024479	pus3	100	82.143	ENSHCOG00000015705	pus3	79	82.143	Hippocampus_comes
ENSACIG00000024479	pus3	100	74.138	ENSIPUG00000000105	pus3	77	77.586	Ictalurus_punctatus
ENSACIG00000024479	pus3	95	63.889	ENSSTOG00000003721	PUS3	69	62.857	Ictidomys_tridecemlineatus
ENSACIG00000024479	pus3	88	61.194	ENSJJAG00000011306	Pus3	67	60.000	Jaculus_jaculus
ENSACIG00000024479	pus3	100	89.286	ENSKMAG00000016715	pus3	79	89.286	Kryptolebias_marmoratus
ENSACIG00000024479	pus3	99	94.231	ENSLBEG00000004143	pus3	78	91.071	Labrus_bergylta
ENSACIG00000024479	pus3	99	55.215	ENSLACG00000011161	PUS3	68	65.714	Latimeria_chalumnae
ENSACIG00000024479	pus3	100	79.630	ENSLOCG00000011922	pus3	82	79.630	Lepisosteus_oculatus
ENSACIG00000024479	pus3	99	55.238	ENSLAFG00000000535	PUS3	62	60.223	Loxodonta_africana
ENSACIG00000024479	pus3	95	61.111	ENSMFAG00000041002	PUS3	69	60.000	Macaca_fascicularis
ENSACIG00000024479	pus3	95	61.111	ENSMMUG00000041875	PUS3	69	60.000	Macaca_mulatta
ENSACIG00000024479	pus3	95	61.111	ENSMNEG00000045347	PUS3	69	60.000	Macaca_nemestrina
ENSACIG00000024479	pus3	99	57.278	ENSMLEG00000029053	PUS3	69	60.000	Mandrillus_leucophaeus
ENSACIG00000024479	pus3	100	80.000	ENSMAMG00000016741	pus3	84	81.651	Mastacembelus_armatus
ENSACIG00000024479	pus3	100	94.643	ENSMZEG00005015950	pus3	80	94.643	Maylandia_zebra
ENSACIG00000024479	pus3	98	56.289	ENSMGAG00000000851	PUS3	79	56.190	Meleagris_gallopavo
ENSACIG00000024479	pus3	99	56.113	ENSMAUG00000015873	Pus3	67	60.000	Mesocricetus_auratus
ENSACIG00000024479	pus3	97	55.806	ENSMICG00000032941	PUS3	65	60.000	Microcebus_murinus
ENSACIG00000024479	pus3	99	55.486	ENSMOCG00000004901	Pus3	62	62.857	Microtus_ochrogaster
ENSACIG00000024479	pus3	100	92.857	ENSMMOG00000013909	pus3	79	92.857	Mola_mola
ENSACIG00000024479	pus3	97	51.562	ENSMODG00000004222	PUS3	69	65.714	Monodelphis_domestica
ENSACIG00000024479	pus3	100	94.643	ENSMALG00000022420	pus3	77	94.643	Monopterus_albus
ENSACIG00000024479	pus3	95	61.111	MGP_CAROLIEiJ_G0031957	Pus3	100	55.590	Mus_caroli
ENSACIG00000024479	pus3	95	61.111	ENSMUSG00000032103	Pus3	100	55.901	Mus_musculus
ENSACIG00000024479	pus3	100	56.522	MGP_PahariEiJ_G0014822	Pus3	100	56.522	Mus_pahari
ENSACIG00000024479	pus3	100	55.590	MGP_SPRETEiJ_G0033081	Pus3	100	55.590	Mus_spretus
ENSACIG00000024479	pus3	97	57.419	ENSMPUG00000006568	PUS3	63	62.044	Mustela_putorius_furo
ENSACIG00000024479	pus3	99	55.873	ENSMLUG00000030636	PUS3	69	57.143	Myotis_lucifugus
ENSACIG00000024479	pus3	99	58.095	ENSNGAG00000013868	Pus3	71	60.000	Nannospalax_galili
ENSACIG00000024479	pus3	100	90.741	ENSNBRG00000015864	pus3	82	90.741	Neolamprologus_brichardi
ENSACIG00000024479	pus3	99	57.278	ENSNLEG00000007460	PUS3	65	60.000	Nomascus_leucogenys
ENSACIG00000024479	pus3	97	53.459	ENSMEUG00000014040	PUS3	66	65.714	Notamacropus_eugenii
ENSACIG00000024479	pus3	97	58.521	ENSOPRG00000007888	-	65	60.137	Ochotona_princeps
ENSACIG00000024479	pus3	99	56.740	ENSODEG00000004280	PUS3	63	62.857	Octodon_degus
ENSACIG00000024479	pus3	100	94.643	ENSONIG00000016224	pus3	80	94.643	Oreochromis_niloticus
ENSACIG00000024479	pus3	99	57.807	ENSOANG00000000406	PUS3	66	71.429	Ornithorhynchus_anatinus
ENSACIG00000024479	pus3	99	57.595	ENSOCUG00000004468	PUS3	58	61.481	Oryctolagus_cuniculus
ENSACIG00000024479	pus3	100	85.185	ENSORLG00000008445	pus3	80	85.185	Oryzias_latipes
ENSACIG00000024479	pus3	99	88.889	ENSORLG00020008847	pus3	79	88.889	Oryzias_latipes_hni
ENSACIG00000024479	pus3	100	88.889	ENSORLG00015007438	pus3	80	88.889	Oryzias_latipes_hsok
ENSACIG00000024479	pus3	99	85.185	ENSOMEG00000014321	pus3	79	85.185	Oryzias_melastigma
ENSACIG00000024479	pus3	99	55.873	ENSOGAG00000008913	PUS3	62	60.223	Otolemur_garnettii
ENSACIG00000024479	pus3	99	55.380	ENSOARG00000011870	PUS3	65	60.000	Ovis_aries
ENSACIG00000024479	pus3	99	56.962	ENSPPAG00000025809	PUS3	65	60.000	Pan_paniscus
ENSACIG00000024479	pus3	99	54.658	ENSPPRG00000005662	PUS3	63	60.000	Panthera_pardus
ENSACIG00000024479	pus3	99	54.969	ENSPTIG00000001192	PUS3	63	60.000	Panthera_tigris_altaica
ENSACIG00000024479	pus3	99	56.962	ENSPTRG00000004449	PUS3	65	60.000	Pan_troglodytes
ENSACIG00000024479	pus3	99	57.278	ENSPANG00000013782	PUS3	69	60.000	Papio_anubis
ENSACIG00000024479	pus3	99	75.000	ENSPKIG00000000646	pus3	80	75.000	Paramormyrops_kingsleyae
ENSACIG00000024479	pus3	95	63.889	ENSPSIG00000013961	PUS3	68	62.857	Pelodiscus_sinensis
ENSACIG00000024479	pus3	88	85.874	ENSPMGG00000000911	pus3	76	84.364	Periophthalmus_magnuspinnatus
ENSACIG00000024479	pus3	99	55.486	ENSPEMG00000009602	Pus3	71	60.000	Peromyscus_maniculatus_bairdii
ENSACIG00000024479	pus3	97	54.430	ENSPCIG00000010225	PUS3	69	65.714	Phascolarctos_cinereus
ENSACIG00000024479	pus3	100	87.500	ENSPFOG00000009447	pus3	81	87.500	Poecilia_formosa
ENSACIG00000024479	pus3	100	87.500	ENSPLAG00000023343	pus3	79	87.500	Poecilia_latipinna
ENSACIG00000024479	pus3	100	87.500	ENSPMEG00000009870	pus3	79	87.500	Poecilia_mexicana
ENSACIG00000024479	pus3	95	77.812	ENSPREG00000003179	pus3	61	79.692	Poecilia_reticulata
ENSACIG00000024479	pus3	99	57.278	ENSPPYG00000004039	PUS3	65	60.000	Pongo_abelii
ENSACIG00000024479	pus3	99	54.603	ENSPCAG00000000441	PUS3	62	59.480	Procavia_capensis
ENSACIG00000024479	pus3	97	56.129	ENSPCOG00000019330	PUS3	65	60.000	Propithecus_coquereli
ENSACIG00000024479	pus3	97	56.410	ENSPVAG00000002606	PUS3	69	57.143	Pteropus_vampyrus
ENSACIG00000024479	pus3	100	94.643	ENSPNYG00000019615	pus3	80	94.643	Pundamilia_nyererei
ENSACIG00000024479	pus3	100	84.211	ENSPNAG00000014541	pus3	77	77.193	Pygocentrus_nattereri
ENSACIG00000024479	pus3	95	63.889	ENSRNOG00000012994	Pus3	69	62.857	Rattus_norvegicus
ENSACIG00000024479	pus3	99	57.143	ENSRBIG00000044456	PUS3	69	57.143	Rhinopithecus_bieti
ENSACIG00000024479	pus3	99	57.595	ENSRROG00000035245	PUS3	69	57.143	Rhinopithecus_roxellana
ENSACIG00000024479	pus3	98	39.088	YFL001W	DEG1	63	39.088	Saccharomyces_cerevisiae
ENSACIG00000024479	pus3	97	55.806	ENSSBOG00000022433	PUS3	65	60.000	Saimiri_boliviensis_boliviensis
ENSACIG00000024479	pus3	99	54.062	ENSSHAG00000001382	PUS3	64	62.857	Sarcophilus_harrisii
ENSACIG00000024479	pus3	100	80.357	ENSSFOG00015004850	pus3	80	80.357	Scleropages_formosus
ENSACIG00000024479	pus3	100	96.429	ENSSMAG00000020340	pus3	80	96.429	Scophthalmus_maximus
ENSACIG00000024479	pus3	100	96.429	ENSSDUG00000020825	pus3	79	96.429	Seriola_dumerili
ENSACIG00000024479	pus3	100	96.429	ENSSLDG00000019932	pus3	79	96.429	Seriola_lalandi_dorsalis
ENSACIG00000024479	pus3	96	56.536	ENSSARG00000013826	PUS3	96	56.536	Sorex_araneus
ENSACIG00000024479	pus3	99	55.556	ENSSPUG00000001412	PUS3	68	62.857	Sphenodon_punctatus
ENSACIG00000024479	pus3	100	92.857	ENSSPAG00000019221	pus3	79	92.857	Stegastes_partitus
ENSACIG00000024479	pus3	97	55.161	ENSSSCG00000015222	PUS3	65	57.241	Sus_scrofa
ENSACIG00000024479	pus3	98	58.360	ENSTGUG00000000778	-	75	57.143	Taeniopygia_guttata
ENSACIG00000024479	pus3	100	78.571	ENSTRUG00000013050	pus3	83	78.571	Takifugu_rubripes
ENSACIG00000024479	pus3	96	79.032	ENSTNIG00000004929	PUS3	78	75.000	Tetraodon_nigroviridis
ENSACIG00000024479	pus3	96	74.233	ENSTNIG00000010307	pus3	78	74.233	Tetraodon_nigroviridis
ENSACIG00000024479	pus3	96	61.111	ENSTBEG00000004382	PUS3	75	60.000	Tupaia_belangeri
ENSACIG00000024479	pus3	97	55.806	ENSTTRG00000012167	PUS3	65	60.000	Tursiops_truncatus
ENSACIG00000024479	pus3	97	56.452	ENSUAMG00000009297	PUS3	63	60.949	Ursus_americanus
ENSACIG00000024479	pus3	97	56.774	ENSUMAG00000001795	PUS3	63	61.314	Ursus_maritimus
ENSACIG00000024479	pus3	99	56.329	ENSVPAG00000001495	PUS3	63	60.949	Vicugna_pacos
ENSACIG00000024479	pus3	99	54.545	ENSVVUG00000020152	PUS3	62	62.857	Vulpes_vulpes
ENSACIG00000024479	pus3	96	54.221	ENSXETG00000024532	pus3	60	51.652	Xenopus_tropicalis
ENSACIG00000024479	pus3	85	85.328	ENSXMAG00000028945	pus3	86	85.328	Xiphophorus_maculatus
ENSACIG00000024479	pus3	85	85.328	ENSXMAG00000025146	pus3	80	85.328	Xiphophorus_maculatus
ENSACIG00000024479	pus3	86	84.030	ENSXMAG00000029934	pus3	61	84.091	Xiphophorus_maculatus
ENSACIG00000024479	pus3	86	84.351	ENSXMAG00000025077	pus3	61	84.411	Xiphophorus_maculatus
ENSACIG00000024479	pus3	100	87.500	ENSXMAG00000028016	pus3	80	87.500	Xiphophorus_maculatus