EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000000033 (Gene tree)
Gene ID: 113029126
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 10709 bases
Position: chr9:19691659-19702367
Accession: 113029126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000000076	MA3	PF02847.17	1e-21	1	1
ENSACLP00000000059	MA3	PF02847.17	1.2e-21	1	1
ENSACLP00000000076	MIF4G	PF02854.19	3.3e-20	1	1
ENSACLP00000000059	MIF4G	PF02854.19	3.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000000060	-	3282	-	ENSACLP00000000059	837 (aa)	XP_026035569	UPI000E40B8AC
ENSACLT00000000078	-	3653	-	ENSACLP00000000076	779 (aa)	-	-

Gene Model

Click here to download ENSACLG00000000033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000000033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000000033	nom1	98	53.418	ENSG00000146909	NOM1	84	59.010	Homo_sapiens
ENSACLG00000000033	nom1	64	90.075	ENSAPOG00000012073	nom1	100	77.040	Acanthochromis_polyacanthus
ENSACLG00000000033	nom1	81	58.393	ENSAMEG00000001412	NOM1	99	55.571	Ailuropoda_melanoleuca
ENSACLG00000000033	nom1	89	94.635	ENSACIG00000018050	nom1	67	93.511	Amphilophus_citrinellus
ENSACLG00000000033	nom1	64	89.700	ENSAOCG00000006229	nom1	100	77.453	Amphiprion_ocellaris
ENSACLG00000000033	nom1	64	89.700	ENSAPEG00000015994	nom1	100	77.156	Amphiprion_percula
ENSACLG00000000033	nom1	98	76.335	ENSATEG00000005405	nom1	100	75.805	Anabas_testudineus
ENSACLG00000000033	nom1	78	57.185	ENSAPLG00000006585	NOM1	80	66.288	Anas_platyrhynchos
ENSACLG00000000033	nom1	79	56.547	ENSACAG00000011192	NOM1	63	65.428	Anolis_carolinensis
ENSACLG00000000033	nom1	63	75.094	ENSAMXG00000041486	nom1	61	75.094	Astyanax_mexicanus
ENSACLG00000000033	nom1	98	52.538	ENSBTAG00000016435	NOM1	62	65.348	Bos_taurus
ENSACLG00000000033	nom1	98	52.441	ENSCJAG00000004336	NOM1	95	53.726	Callithrix_jacchus
ENSACLG00000000033	nom1	98	51.847	ENSCAFG00020005121	NOM1	83	55.525	Canis_lupus_dingo
ENSACLG00000000033	nom1	81	57.204	ENSCHIG00000020102	NOM1	63	64.972	Capra_hircus
ENSACLG00000000033	nom1	97	54.194	ENSTSYG00000000227	NOM1	64	66.292	Carlito_syrichta
ENSACLG00000000033	nom1	62	69.098	ENSCAPG00000016273	NOM1	99	69.098	Cavia_aperea
ENSACLG00000000033	nom1	98	51.519	ENSCPOG00000025538	NOM1	96	51.548	Cavia_porcellus
ENSACLG00000000033	nom1	88	71.196	ENSCCAG00000014944	NOM1	99	68.362	Cebus_capucinus
ENSACLG00000000033	nom1	84	56.887	ENSCLAG00000000267	NOM1	62	66.098	Chinchilla_lanigera
ENSACLG00000000033	nom1	68	69.328	ENSCPBG00000018215	NOM1	74	67.228	Chrysemys_picta_bellii
ENSACLG00000000033	nom1	85	38.248	ENSCING00000005248	-	67	42.400	Ciona_intestinalis
ENSACLG00000000033	nom1	68	62.759	ENSCANG00000041984	NOM1	89	67.625	Colobus_angolensis_palliatus
ENSACLG00000000033	nom1	81	59.590	ENSCGRG00001020293	Nom1	80	59.307	Cricetulus_griseus_chok1gshd
ENSACLG00000000033	nom1	62	67.630	ENSCGRG00000005405	Nom1	97	67.630	Cricetulus_griseus_crigri
ENSACLG00000000033	nom1	98	69.110	ENSCSEG00000000932	nom1	96	68.466	Cynoglossus_semilaevis
ENSACLG00000000033	nom1	98	73.697	ENSCVAG00000007562	nom1	98	72.010	Cyprinodon_variegatus
ENSACLG00000000033	nom1	100	64.304	ENSDARG00000060027	nom1	100	77.002	Danio_rerio
ENSACLG00000000033	nom1	62	57.605	ENSDORG00000015682	Nom1	91	50.307	Dipodomys_ordii
ENSACLG00000000033	nom1	69	36.957	FBgn0035336	CG9004	60	38.104	Drosophila_melanogaster
ENSACLG00000000033	nom1	73	57.857	ENSETEG00000003104	NOM1	75	57.857	Echinops_telfairi
ENSACLG00000000033	nom1	52	52.847	ENSEBUG00000010077	nom1	96	52.847	Eptatretus_burgeri
ENSACLG00000000033	nom1	81	60.876	ENSEASG00005001489	NOM1	63	67.664	Equus_asinus_asinus
ENSACLG00000000033	nom1	65	66.425	ENSECAG00000007596	NOM1	57	67.416	Equus_caballus
ENSACLG00000000033	nom1	99	65.452	ENSELUG00000006266	nom1	98	67.425	Esox_lucius
ENSACLG00000000033	nom1	81	58.357	ENSFCAG00000006467	NOM1	84	57.426	Felis_catus
ENSACLG00000000033	nom1	81	59.329	ENSFALG00000006904	NOM1	99	58.488	Ficedula_albicollis
ENSACLG00000000033	nom1	98	53.137	ENSFDAG00000016241	NOM1	64	65.414	Fukomys_damarensis
ENSACLG00000000033	nom1	98	74.393	ENSFHEG00000015974	nom1	98	73.934	Fundulus_heteroclitus
ENSACLG00000000033	nom1	94	61.290	ENSGMOG00000005129	nom1	69	73.684	Gadus_morhua
ENSACLG00000000033	nom1	86	55.842	ENSGALG00000006437	NOM1	81	54.485	Gallus_gallus
ENSACLG00000000033	nom1	98	73.918	ENSGAFG00000003211	nom1	98	73.519	Gambusia_affinis
ENSACLG00000000033	nom1	82	58.321	ENSGAGG00000014347	NOM1	64	68.061	Gopherus_agassizii
ENSACLG00000000033	nom1	65	65.818	ENSGGOG00000010920	NOM1	88	54.458	Gorilla_gorilla
ENSACLG00000000033	nom1	100	98.973	ENSHBUG00000014616	nom1	100	98.973	Haplochromis_burtoni
ENSACLG00000000033	nom1	98	53.367	ENSHGLG00000007392	NOM1	61	67.614	Heterocephalus_glaber_female
ENSACLG00000000033	nom1	85	70.385	ENSHGLG00100014407	NOM1	61	67.614	Heterocephalus_glaber_male
ENSACLG00000000033	nom1	64	72.037	ENSIPUG00000013980	nom1	63	73.019	Ictalurus_punctatus
ENSACLG00000000033	nom1	65	66.484	ENSSTOG00000031736	NOM1	93	67.797	Ictidomys_tridecemlineatus
ENSACLG00000000033	nom1	58	69.691	ENSJJAG00000011716	Nom1	98	69.691	Jaculus_jaculus
ENSACLG00000000033	nom1	98	71.663	ENSLBEG00000009252	nom1	100	72.152	Labrus_bergylta
ENSACLG00000000033	nom1	88	59.463	ENSLACG00000011777	NOM1	95	58.312	Latimeria_chalumnae
ENSACLG00000000033	nom1	98	63.007	ENSLOCG00000012452	nom1	67	74.860	Lepisosteus_oculatus
ENSACLG00000000033	nom1	94	49.622	ENSLAFG00000007119	NOM1	65	60.300	Loxodonta_africana
ENSACLG00000000033	nom1	98	51.088	ENSMMUG00000039033	NOM1	61	63.364	Macaca_mulatta
ENSACLG00000000033	nom1	62	68.008	ENSMLEG00000037062	NOM1	99	67.108	Mandrillus_leucophaeus
ENSACLG00000000033	nom1	98	74.732	ENSMAMG00000004118	nom1	98	75.180	Mastacembelus_armatus
ENSACLG00000000033	nom1	100	99.642	ENSMZEG00005000384	nom1	100	99.642	Maylandia_zebra
ENSACLG00000000033	nom1	82	57.969	ENSMGAG00000005051	NOM1	77	65.909	Meleagris_gallopavo
ENSACLG00000000033	nom1	98	54.475	ENSMAUG00000017988	Nom1	87	57.240	Mesocricetus_auratus
ENSACLG00000000033	nom1	65	64.610	ENSMICG00000017531	NOM1	95	52.421	Microcebus_murinus
ENSACLG00000000033	nom1	98	54.359	ENSMOCG00000015962	Nom1	95	53.819	Microtus_ochrogaster
ENSACLG00000000033	nom1	99	73.964	ENSMMOG00000004419	nom1	99	69.474	Mola_mola
ENSACLG00000000033	nom1	99	53.770	ENSMODG00000005177	NOM1	81	61.254	Monodelphis_domestica
ENSACLG00000000033	nom1	98	75.777	ENSMALG00000008800	nom1	98	75.226	Monopterus_albus
ENSACLG00000000033	nom1	97	53.930	MGP_CAROLIEiJ_G0027043	Nom1	94	53.317	Mus_caroli
ENSACLG00000000033	nom1	97	54.348	ENSMUSG00000001569	Nom1	94	53.118	Mus_musculus
ENSACLG00000000033	nom1	97	53.325	MGP_SPRETEiJ_G0028039	Nom1	94	52.738	Mus_spretus
ENSACLG00000000033	nom1	81	55.988	ENSMPUG00000009745	NOM1	99	56.178	Mustela_putorius_furo
ENSACLG00000000033	nom1	71	62.957	ENSMLUG00000009129	NOM1	88	67.297	Myotis_lucifugus
ENSACLG00000000033	nom1	100	97.823	ENSNBRG00000016429	nom1	100	97.735	Neolamprologus_brichardi
ENSACLG00000000033	nom1	98	52.417	ENSNLEG00000000238	NOM1	95	53.421	Nomascus_leucogenys
ENSACLG00000000033	nom1	53	71.587	ENSMEUG00000001108	NOM1	75	53.595	Notamacropus_eugenii
ENSACLG00000000033	nom1	53	57.692	ENSOPRG00000014676	NOM1	60	61.364	Ochotona_princeps
ENSACLG00000000033	nom1	81	59.507	ENSODEG00000009399	NOM1	98	58.631	Octodon_degus
ENSACLG00000000033	nom1	94	96.438	ENSONIG00000005958	nom1	100	96.438	Oreochromis_niloticus
ENSACLG00000000033	nom1	53	70.673	ENSOANG00000006139	-	97	68.467	Ornithorhynchus_anatinus
ENSACLG00000000033	nom1	93	46.820	ENSOCUG00000021448	-	91	47.678	Oryctolagus_cuniculus
ENSACLG00000000033	nom1	93	56.999	ENSOCUG00000004071	-	85	58.880	Oryctolagus_cuniculus
ENSACLG00000000033	nom1	98	72.639	ENSORLG00000010541	nom1	98	73.341	Oryzias_latipes
ENSACLG00000000033	nom1	92	73.931	ENSORLG00020010789	nom1	99	73.846	Oryzias_latipes_hni
ENSACLG00000000033	nom1	98	73.212	ENSORLG00015010475	nom1	99	74.548	Oryzias_latipes_hsok
ENSACLG00000000033	nom1	98	74.007	ENSOMEG00000004219	nom1	98	74.396	Oryzias_melastigma
ENSACLG00000000033	nom1	63	66.415	ENSOGAG00000001124	NOM1	88	65.918	Otolemur_garnettii
ENSACLG00000000033	nom1	81	56.772	ENSOARG00000007261	NOM1	71	64.972	Ovis_aries
ENSACLG00000000033	nom1	81	59.510	ENSPPAG00000041374	NOM1	95	54.578	Pan_paniscus
ENSACLG00000000033	nom1	81	57.536	ENSPTIG00000013532	NOM1	94	57.447	Panthera_tigris_altaica
ENSACLG00000000033	nom1	81	59.510	ENSPTRG00000019917	NOM1	95	54.458	Pan_troglodytes
ENSACLG00000000033	nom1	98	54.440	ENSPANG00000007605	NOM1	61	66.917	Papio_anubis
ENSACLG00000000033	nom1	99	61.157	ENSPKIG00000005825	nom1	98	59.641	Paramormyrops_kingsleyae
ENSACLG00000000033	nom1	63	67.978	ENSPSIG00000017848	NOM1	89	67.598	Pelodiscus_sinensis
ENSACLG00000000033	nom1	98	72.107	ENSPMGG00000002577	nom1	100	71.106	Periophthalmus_magnuspinnatus
ENSACLG00000000033	nom1	98	54.268	ENSPEMG00000024180	Nom1	60	68.593	Peromyscus_maniculatus_bairdii
ENSACLG00000000033	nom1	99	52.703	ENSPCIG00000027941	NOM1	59	68.165	Phascolarctos_cinereus
ENSACLG00000000033	nom1	100	74.323	ENSPFOG00000015771	nom1	98	74.879	Poecilia_formosa
ENSACLG00000000033	nom1	64	85.821	ENSPLAG00000007856	nom1	98	73.998	Poecilia_latipinna
ENSACLG00000000033	nom1	100	74.558	ENSPMEG00000014155	nom1	98	75.121	Poecilia_mexicana
ENSACLG00000000033	nom1	98	72.914	ENSPREG00000008850	nom1	98	74.576	Poecilia_reticulata
ENSACLG00000000033	nom1	98	50.575	ENSPPYG00000018222	NOM1	95	50.903	Pongo_abelii
ENSACLG00000000033	nom1	80	62.558	ENSPCAG00000000440	NOM1	79	62.558	Procavia_capensis
ENSACLG00000000033	nom1	62	66.477	ENSPCOG00000015222	NOM1	99	66.477	Propithecus_coquereli
ENSACLG00000000033	nom1	97	51.490	ENSPVAG00000014760	NOM1	95	52.278	Pteropus_vampyrus
ENSACLG00000000033	nom1	100	99.230	ENSPNYG00000006975	nom1	100	99.164	Pundamilia_nyererei
ENSACLG00000000033	nom1	97	51.149	ENSRNOG00000048969	AABR07059041.1	64	63.198	Rattus_norvegicus
ENSACLG00000000033	nom1	98	54.615	ENSRBIG00000037042	NOM1	62	66.604	Rhinopithecus_bieti
ENSACLG00000000033	nom1	98	54.359	ENSRROG00000037293	NOM1	62	66.229	Rhinopithecus_roxellana
ENSACLG00000000033	nom1	63	69.886	ENSSHAG00000017998	-	77	69.886	Sarcophilus_harrisii
ENSACLG00000000033	nom1	53	63.680	ENSSHAG00000002835	-	99	63.680	Sarcophilus_harrisii
ENSACLG00000000033	nom1	58	73.045	ENSSFOG00015003196	nom1	100	73.045	Scleropages_formosus
ENSACLG00000000033	nom1	100	76.297	ENSSMAG00000011047	nom1	98	76.867	Scophthalmus_maximus
ENSACLG00000000033	nom1	98	78.417	ENSSDUG00000006834	nom1	100	77.032	Seriola_dumerili
ENSACLG00000000033	nom1	98	76.295	ENSSLDG00000021812	nom1	100	75.587	Seriola_lalandi_dorsalis
ENSACLG00000000033	nom1	86	50.000	ENSSPUG00000002556	NOM1	100	55.350	Sphenodon_punctatus
ENSACLG00000000033	nom1	98	78.916	ENSSPAG00000000953	nom1	100	77.688	Stegastes_partitus
ENSACLG00000000033	nom1	81	58.273	ENSTGUG00000000702	-	89	55.526	Taeniopygia_guttata
ENSACLG00000000033	nom1	98	70.652	ENSTRUG00000010239	nom1	98	70.553	Takifugu_rubripes
ENSACLG00000000033	nom1	98	68.970	ENSTNIG00000012783	nom1	100	69.647	Tetraodon_nigroviridis
ENSACLG00000000033	nom1	95	53.368	ENSTTRG00000009691	NOM1	93	53.463	Tursiops_truncatus
ENSACLG00000000033	nom1	65	63.504	ENSUAMG00000025450	NOM1	61	64.906	Ursus_americanus
ENSACLG00000000033	nom1	86	55.020	ENSUMAG00000014275	NOM1	97	55.556	Ursus_maritimus
ENSACLG00000000033	nom1	78	70.303	ENSVVUG00000002608	NOM1	62	65.543	Vulpes_vulpes
ENSACLG00000000033	nom1	88	55.791	ENSXETG00000021611	nom1	82	72.195	Xenopus_tropicalis
ENSACLG00000000033	nom1	98	73.918	ENSXMAG00000002451	nom1	98	73.761	Xiphophorus_maculatus