EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000000281 (Gene tree)
Gene ID: 113036867
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 12592 bases
Position: chr14:22456911-22469502
Accession: 113036867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000000354	HARE-HTH	PF05066.13	1.1e-14	1	1
ENSACLP00000000364	HARE-HTH	PF05066.13	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000000367	-	6922	-	ENSACLP00000000354	544 (aa)	XP_026049219	UPI00032A207F
ENSACLT00000000378	-	7219	-	ENSACLP00000000364	476 (aa)	-	-

Gene Model

Click here to download ENSACLG00000000281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000000281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000000281	tbrg1	100	91.009	ENSAPOG00000017352	tbrg1	100	91.009	Acanthochromis_polyacanthus
ENSACLG00000000281	tbrg1	93	91.704	ENSACIG00000021274	tbrg1	94	92.063	Amphilophus_citrinellus
ENSACLG00000000281	tbrg1	100	90.459	ENSAOCG00000018605	tbrg1	100	90.459	Amphiprion_ocellaris
ENSACLG00000000281	tbrg1	100	90.459	ENSAPEG00000022443	tbrg1	100	90.459	Amphiprion_percula
ENSACLG00000000281	tbrg1	100	90.566	ENSATEG00000023537	tbrg1	100	90.459	Anabas_testudineus
ENSACLG00000000281	tbrg1	99	71.193	ENSAMXG00000008381	tbrg1	98	71.193	Astyanax_mexicanus
ENSACLG00000000281	tbrg1	100	85.165	ENSCSEG00000002445	tbrg1	100	86.081	Cynoglossus_semilaevis
ENSACLG00000000281	tbrg1	100	81.967	ENSCVAG00000019626	tbrg1	100	81.967	Cyprinodon_variegatus
ENSACLG00000000281	tbrg1	98	72.067	ENSDARG00000074996	tbrg1	97	72.998	Danio_rerio
ENSACLG00000000281	tbrg1	90	48.661	ENSEBUG00000014060	tbrg1	90	47.674	Eptatretus_burgeri
ENSACLG00000000281	tbrg1	99	78.958	ENSELUG00000017458	tbrg1	99	78.467	Esox_lucius
ENSACLG00000000281	tbrg1	94	76.940	ENSFHEG00000004283	tbrg1	92	77.890	Fundulus_heteroclitus
ENSACLG00000000281	tbrg1	100	82.332	ENSGAFG00000000204	tbrg1	100	82.332	Gambusia_affinis
ENSACLG00000000281	tbrg1	100	100.000	ENSHBUG00000004935	tbrg1	100	100.000	Haplochromis_burtoni
ENSACLG00000000281	tbrg1	100	78.986	ENSHCOG00000010588	tbrg1	100	78.986	Hippocampus_comes
ENSACLG00000000281	tbrg1	99	71.927	ENSIPUG00000008697	tbrg1	98	72.294	Ictalurus_punctatus
ENSACLG00000000281	tbrg1	100	83.700	ENSKMAG00000002775	tbrg1	100	84.615	Kryptolebias_marmoratus
ENSACLG00000000281	tbrg1	99	86.765	ENSLBEG00000017559	tbrg1	99	84.340	Labrus_bergylta
ENSACLG00000000281	tbrg1	100	74.639	ENSLOCG00000003093	tbrg1	99	74.141	Lepisosteus_oculatus
ENSACLG00000000281	tbrg1	100	88.991	ENSMAMG00000000876	tbrg1	100	88.991	Mastacembelus_armatus
ENSACLG00000000281	tbrg1	100	99.816	ENSMZEG00005013545	tbrg1	92	99.816	Maylandia_zebra
ENSACLG00000000281	tbrg1	94	83.556	ENSMMOG00000005314	tbrg1	93	83.268	Mola_mola
ENSACLG00000000281	tbrg1	93	89.173	ENSMALG00000011630	tbrg1	99	89.173	Monopterus_albus
ENSACLG00000000281	tbrg1	100	97.899	ENSNBRG00000017490	tbrg1	100	98.127	Neolamprologus_brichardi
ENSACLG00000000281	tbrg1	100	97.978	ENSONIG00000005284	tbrg1	100	97.978	Oreochromis_niloticus
ENSACLG00000000281	tbrg1	100	82.752	ENSORLG00000014519	tbrg1	100	82.752	Oryzias_latipes
ENSACLG00000000281	tbrg1	100	82.385	ENSORLG00020009567	tbrg1	100	82.385	Oryzias_latipes_hni
ENSACLG00000000281	tbrg1	100	82.385	ENSORLG00015000448	tbrg1	100	82.385	Oryzias_latipes_hsok
ENSACLG00000000281	tbrg1	100	85.321	ENSOMEG00000006130	tbrg1	100	85.321	Oryzias_melastigma
ENSACLG00000000281	tbrg1	95	73.796	ENSPKIG00000012274	tbrg1	90	73.946	Paramormyrops_kingsleyae
ENSACLG00000000281	tbrg1	100	79.781	ENSPMGG00000015968	tbrg1	100	80.146	Periophthalmus_magnuspinnatus
ENSACLG00000000281	tbrg1	100	82.696	ENSPFOG00000004279	tbrg1	100	82.696	Poecilia_formosa
ENSACLG00000000281	tbrg1	100	82.696	ENSPLAG00000001227	tbrg1	100	82.696	Poecilia_latipinna
ENSACLG00000000281	tbrg1	100	82.514	ENSPMEG00000000955	tbrg1	100	82.514	Poecilia_mexicana
ENSACLG00000000281	tbrg1	100	82.332	ENSPREG00000005246	tbrg1	100	82.332	Poecilia_reticulata
ENSACLG00000000281	tbrg1	100	100.000	ENSPNYG00000012625	tbrg1	100	100.000	Pundamilia_nyererei
ENSACLG00000000281	tbrg1	99	69.581	ENSPNAG00000028332	tbrg1	99	71.683	Pygocentrus_nattereri
ENSACLG00000000281	tbrg1	94	75.439	ENSSFOG00015009308	tbrg1	99	68.707	Scleropages_formosus
ENSACLG00000000281	tbrg1	100	86.447	ENSSMAG00000002529	tbrg1	100	86.447	Scophthalmus_maximus
ENSACLG00000000281	tbrg1	99	92.096	ENSSDUG00000013674	tbrg1	99	92.096	Seriola_dumerili
ENSACLG00000000281	tbrg1	94	90.308	ENSSLDG00000008932	tbrg1	98	90.820	Seriola_lalandi_dorsalis
ENSACLG00000000281	tbrg1	86	89.722	ENSSPAG00000004808	tbrg1	99	89.722	Stegastes_partitus
ENSACLG00000000281	tbrg1	95	81.238	ENSTRUG00000005960	tbrg1	98	81.238	Takifugu_rubripes
ENSACLG00000000281	tbrg1	100	82.332	ENSXMAG00000001551	tbrg1	100	82.332	Xiphophorus_maculatus