EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000000316 (Gene tree)
Gene ID: 113024424
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 10342 bases
Position: chr6:28783914-28794255
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000000436	zf-CCHC_2	PF13696.6	4.9e-08	1	1
ENSACLP00000000415	zf-CCHC_2	PF13696.6	8.7e-08	1	1
ENSACLP00000000436	zf-CCHC	PF00098.23	0.00031	1	1
ENSACLP00000000415	zf-CCHC	PF00098.23	0.00055	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000000428	-	7992	-	ENSACLP00000000415	1742 (aa)	-	-
ENSACLT00000000449	-	3051	-	ENSACLP00000000436	1016 (aa)	-	-

Gene Model

Click here to download ENSACLG00000000316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000000316's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000000316	-	93	79.158	ENSAPOG00000001357	-	92	74.620	Acanthochromis_polyacanthus
ENSACLG00000000316	-	99	74.885	ENSAOCG00000022294	-	95	74.912	Amphiprion_ocellaris
ENSACLG00000000316	-	99	75.144	ENSAPEG00000001446	-	92	75.234	Amphiprion_percula
ENSACLG00000000316	-	99	70.869	ENSATEG00000009057	-	92	70.457	Anabas_testudineus
ENSACLG00000000316	-	90	69.479	ENSFHEG00000002411	-	52	89.655	Fundulus_heteroclitus
ENSACLG00000000316	-	93	69.583	ENSGAFG00000002762	-	88	91.635	Gambusia_affinis
ENSACLG00000000316	-	99	97.463	ENSHBUG00000019761	-	94	97.520	Haplochromis_burtoni
ENSACLG00000000316	-	99	98.148	ENSMZEG00005011490	rbbp6	94	98.206	Maylandia_zebra
ENSACLG00000000316	-	93	76.681	ENSMALG00000002091	-	92	68.304	Monopterus_albus
ENSACLG00000000316	-	100	96.741	ENSNBRG00000007660	-	100	96.796	Neolamprologus_brichardi
ENSACLG00000000316	-	99	94.182	ENSONIG00000003324	rbbp6	99	92.183	Oreochromis_niloticus
ENSACLG00000000316	-	99	66.641	ENSORLG00000008630	-	95	65.011	Oryzias_latipes
ENSACLG00000000316	-	93	70.409	ENSORLG00020013138	-	67	64.594	Oryzias_latipes_hni
ENSACLG00000000316	-	99	65.684	ENSORLG00015012612	-	93	64.448	Oryzias_latipes_hsok
ENSACLG00000000316	-	97	66.383	ENSOMEG00000001913	-	91	65.143	Oryzias_melastigma
ENSACLG00000000316	-	93	69.990	ENSPFOG00000022154	-	90	66.815	Poecilia_formosa
ENSACLG00000000316	-	90	69.223	ENSPLAG00000000196	-	93	91.810	Poecilia_latipinna
ENSACLG00000000316	-	93	71.109	ENSPMEG00000016200	-	88	91.635	Poecilia_mexicana
ENSACLG00000000316	-	93	75.183	ENSSMAG00000002551	-	90	69.226	Scophthalmus_maximus
ENSACLG00000000316	-	96	72.965	ENSSDUG00000017397	rbbp6	94	72.865	Seriola_dumerili
ENSACLG00000000316	-	86	72.841	ENSSLDG00000023195	-	95	90.086	Seriola_lalandi_dorsalis
ENSACLG00000000316	-	93	80.021	ENSSPAG00000013009	-	93	74.623	Stegastes_partitus
ENSACLG00000000316	-	98	63.066	ENSTRUG00000025959	-	92	64.044	Takifugu_rubripes