EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000000371 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 5747 bases
Position: chr20:10933528-10939274
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000000500	Las1	PF04031.13	3.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000000514	-	327	-	ENSACLP00000000500	108 (aa)	-	-

Gene Model

Click here to download ENSACLG00000000371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000000371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000000371	-	98	88.679	ENSACLG00000000531	-	62	88.679
ENSACLG00000000371	-	97	90.476	ENSACLG00000000546	-	62	89.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000000371	-	92	82.828	ENSACIG00000006110	-	86	82.828	Amphilophus_citrinellus
ENSACLG00000000371	-	91	85.714	ENSAOCG00000018705	-	69	85.714	Amphiprion_ocellaris
ENSACLG00000000371	-	91	85.714	ENSAPEG00000017704	-	69	85.714	Amphiprion_percula
ENSACLG00000000371	-	92	78.788	ENSCVAG00000011585	-	92	78.788	Cyprinodon_variegatus
ENSACLG00000000371	-	94	75.248	ENSGAFG00000014822	-	95	75.248	Gambusia_affinis
ENSACLG00000000371	-	100	98.148	ENSHBUG00000002121	-	100	98.148	Haplochromis_burtoni
ENSACLG00000000371	-	92	78.788	ENSLBEG00000011597	-	78	78.788	Labrus_bergylta
ENSACLG00000000371	-	88	77.895	ENSMAMG00000015777	-	87	77.895	Mastacembelus_armatus
ENSACLG00000000371	-	95	92.233	ENSMZEG00005002235	-	93	92.233	Maylandia_zebra
ENSACLG00000000371	-	98	88.679	ENSMZEG00005025953	-	62	88.679	Maylandia_zebra
ENSACLG00000000371	-	100	100.000	ENSMZEG00005026525	-	100	100.000	Maylandia_zebra
ENSACLG00000000371	-	91	79.592	ENSMMOG00000017364	-	69	79.592	Mola_mola
ENSACLG00000000371	-	85	96.739	ENSNBRG00000004074	-	86	96.739	Neolamprologus_brichardi
ENSACLG00000000371	-	81	95.455	ENSONIG00000017910	-	54	95.455	Oreochromis_niloticus
ENSACLG00000000371	-	74	66.250	ENSONIG00000009145	-	50	66.250	Oreochromis_niloticus
ENSACLG00000000371	-	85	69.565	ENSPMGG00000013885	-	97	69.608	Periophthalmus_magnuspinnatus
ENSACLG00000000371	-	92	78.788	ENSPMEG00000017983	-	95	78.788	Poecilia_mexicana
ENSACLG00000000371	-	95	76.699	ENSPREG00000005736	-	94	76.699	Poecilia_reticulata
ENSACLG00000000371	-	100	98.148	ENSPNYG00000024097	-	100	98.148	Pundamilia_nyererei
ENSACLG00000000371	-	85	35.870	ENSRNOG00000021748	Las1l	59	52.632	Rattus_norvegicus
ENSACLG00000000371	-	97	78.505	ENSSMAG00000001529	-	79	78.505	Scophthalmus_maximus
ENSACLG00000000371	-	100	77.064	ENSSDUG00000013831	-	84	77.064	Seriola_dumerili
ENSACLG00000000371	-	100	76.147	ENSSLDG00000001558	-	84	76.147	Seriola_lalandi_dorsalis
ENSACLG00000000371	-	95	80.583	ENSTRUG00000020641	-	76	80.583	Takifugu_rubripes
ENSACLG00000000371	-	90	82.474	ENSTNIG00000003282	-	50	82.474	Tetraodon_nigroviridis
ENSACLG00000000371	-	85	75.000	ENSXCOG00000000961	-	72	75.000	Xiphophorus_couchianus
ENSACLG00000000371	-	94	72.549	ENSXMAG00000023987	-	96	72.549	Xiphophorus_maculatus