EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000000424 (Gene tree)
Gene ID: 113020886
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat containing 6C1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 11322 bases
Position: chr4:17401174-17412495
Accession: ZDB-GENE-030131-7440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000000622	RRM_1	PF00076.22	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000000637	-	5004	-	ENSACLP00000000622	1667 (aa)	-	-

Gene Model

Click here to download ENSACLG00000000424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000000424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000000424	tnrc6c1	99	53.079	ENSACLG00000006469	tnrc6c2	93	52.896

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000000424	tnrc6c1	98	53.275	ENSG00000078687	TNRC6C	93	48.314	Homo_sapiens
ENSACLG00000000424	tnrc6c1	99	77.503	ENSAPOG00000019749	tnrc6c1	99	77.559	Acanthochromis_polyacanthus
ENSACLG00000000424	tnrc6c1	98	51.740	ENSAMEG00000013756	TNRC6C	99	47.597	Ailuropoda_melanoleuca
ENSACLG00000000424	tnrc6c1	100	87.789	ENSACIG00000008075	tnrc6c1	100	87.789	Amphilophus_citrinellus
ENSACLG00000000424	tnrc6c1	98	84.615	ENSAOCG00000023968	tnrc6c1	99	79.539	Amphiprion_ocellaris
ENSACLG00000000424	tnrc6c1	99	79.169	ENSAPEG00000009020	tnrc6c1	99	79.708	Amphiprion_percula
ENSACLG00000000424	tnrc6c1	99	53.154	ENSAPLG00000005456	TNRC6C	94	47.856	Anas_platyrhynchos
ENSACLG00000000424	tnrc6c1	99	49.392	ENSACAG00000016198	TNRC6C	92	48.331	Anolis_carolinensis
ENSACLG00000000424	tnrc6c1	99	48.238	ENSANAG00000021554	TNRC6C	93	48.470	Aotus_nancymaae
ENSACLG00000000424	tnrc6c1	97	52.159	ENSBTAG00000018658	TNRC6C	100	48.895	Bos_taurus
ENSACLG00000000424	tnrc6c1	99	48.528	ENSCJAG00000019431	TNRC6C	93	48.207	Callithrix_jacchus
ENSACLG00000000424	tnrc6c1	98	53.184	ENSCAFG00000005224	TNRC6C	93	48.475	Canis_familiaris
ENSACLG00000000424	tnrc6c1	98	52.898	ENSCAFG00020006661	TNRC6C	93	48.272	Canis_lupus_dingo
ENSACLG00000000424	tnrc6c1	98	52.642	ENSCHIG00000026004	TNRC6C	100	48.662	Capra_hircus
ENSACLG00000000424	tnrc6c1	91	49.687	ENSTSYG00000005403	TNRC6C	100	49.834	Carlito_syrichta
ENSACLG00000000424	tnrc6c1	93	49.926	ENSCAPG00000007307	TNRC6C	93	44.586	Cavia_aperea
ENSACLG00000000424	tnrc6c1	93	53.382	ENSCPOG00000000467	TNRC6C	99	47.246	Cavia_porcellus
ENSACLG00000000424	tnrc6c1	99	48.713	ENSCCAG00000030524	TNRC6C	93	48.445	Cebus_capucinus
ENSACLG00000000424	tnrc6c1	99	48.660	ENSCATG00000033135	TNRC6C	100	49.390	Cercocebus_atys
ENSACLG00000000424	tnrc6c1	98	52.277	ENSCLAG00000011139	TNRC6C	93	47.753	Chinchilla_lanigera
ENSACLG00000000424	tnrc6c1	99	48.707	ENSCSAG00000005167	TNRC6C	93	48.466	Chlorocebus_sabaeus
ENSACLG00000000424	tnrc6c1	64	67.227	ENSCHOG00000000088	TNRC6C	65	66.387	Choloepus_hoffmanni
ENSACLG00000000424	tnrc6c1	99	48.499	ENSCPBG00000027960	TNRC6C	100	49.778	Chrysemys_picta_bellii
ENSACLG00000000424	tnrc6c1	79	53.533	ENSCANG00000041771	TNRC6C	100	49.445	Colobus_angolensis_palliatus
ENSACLG00000000424	tnrc6c1	99	46.400	ENSCGRG00001022686	Tnrc6c	100	46.534	Cricetulus_griseus_chok1gshd
ENSACLG00000000424	tnrc6c1	99	46.544	ENSCGRG00000018041	Tnrc6c	100	46.534	Cricetulus_griseus_crigri
ENSACLG00000000424	tnrc6c1	99	70.404	ENSCSEG00000012744	tnrc6c1	64	71.947	Cynoglossus_semilaevis
ENSACLG00000000424	tnrc6c1	99	58.814	ENSDARG00000076847	tnrc6c1	99	60.253	Danio_rerio
ENSACLG00000000424	tnrc6c1	99	47.890	ENSDNOG00000003247	TNRC6C	95	47.594	Dasypus_novemcinctus
ENSACLG00000000424	tnrc6c1	78	49.588	ENSDORG00000004558	Tnrc6c	95	49.211	Dipodomys_ordii
ENSACLG00000000424	tnrc6c1	87	53.416	ENSETEG00000005527	TNRC6C	82	52.562	Echinops_telfairi
ENSACLG00000000424	tnrc6c1	90	51.294	ENSEASG00005004799	TNRC6C	100	47.553	Equus_asinus_asinus
ENSACLG00000000424	tnrc6c1	98	52.517	ENSECAG00000012486	TNRC6C	93	47.964	Equus_caballus
ENSACLG00000000424	tnrc6c1	93	55.026	ENSEEUG00000010008	TNRC6C	94	51.849	Erinaceus_europaeus
ENSACLG00000000424	tnrc6c1	99	51.719	ENSFCAG00000028358	TNRC6C	100	47.971	Felis_catus
ENSACLG00000000424	tnrc6c1	78	53.557	ENSFALG00000000848	TNRC6C	100	48.994	Ficedula_albicollis
ENSACLG00000000424	tnrc6c1	97	48.146	ENSFDAG00000010368	TNRC6C	99	47.283	Fukomys_damarensis
ENSACLG00000000424	tnrc6c1	99	73.874	ENSFHEG00000002936	tnrc6c1	99	73.003	Fundulus_heteroclitus
ENSACLG00000000424	tnrc6c1	96	55.532	ENSGALG00000001725	TNRC6C	100	49.750	Gallus_gallus
ENSACLG00000000424	tnrc6c1	99	74.649	ENSGAFG00000019019	tnrc6c1	100	72.226	Gambusia_affinis
ENSACLG00000000424	tnrc6c1	99	69.590	ENSGACG00000012320	tnrc6c1	92	69.668	Gasterosteus_aculeatus
ENSACLG00000000424	tnrc6c1	99	49.711	ENSGAGG00000022043	TNRC6C	99	49.209	Gopherus_agassizii
ENSACLG00000000424	tnrc6c1	98	52.961	ENSGGOG00000011304	TNRC6C	94	48.319	Gorilla_gorilla
ENSACLG00000000424	tnrc6c1	100	98.562	ENSHBUG00000010846	tnrc6c1	100	98.562	Haplochromis_burtoni
ENSACLG00000000424	tnrc6c1	98	51.633	ENSHGLG00000004809	TNRC6C	90	50.851	Heterocephalus_glaber_female
ENSACLG00000000424	tnrc6c1	98	51.256	ENSHGLG00100012597	TNRC6C	90	50.543	Heterocephalus_glaber_male
ENSACLG00000000424	tnrc6c1	99	58.502	ENSIPUG00000000818	tnrc6c1	94	58.787	Ictalurus_punctatus
ENSACLG00000000424	tnrc6c1	97	52.628	ENSSTOG00000009101	TNRC6C	93	51.961	Ictidomys_tridecemlineatus
ENSACLG00000000424	tnrc6c1	97	52.221	ENSJJAG00000017055	Tnrc6c	89	50.712	Jaculus_jaculus
ENSACLG00000000424	tnrc6c1	97	73.271	ENSKMAG00000021023	tnrc6c1	100	69.156	Kryptolebias_marmoratus
ENSACLG00000000424	tnrc6c1	70	66.667	ENSLACG00000015283	TNRC6C	95	66.480	Latimeria_chalumnae
ENSACLG00000000424	tnrc6c1	99	58.457	ENSLOCG00000013377	tnrc6c1	93	58.302	Lepisosteus_oculatus
ENSACLG00000000424	tnrc6c1	99	50.574	ENSLAFG00000011122	TNRC6C	99	45.822	Loxodonta_africana
ENSACLG00000000424	tnrc6c1	99	48.660	ENSMFAG00000043943	TNRC6C	100	49.390	Macaca_fascicularis
ENSACLG00000000424	tnrc6c1	99	48.813	ENSMMUG00000011924	TNRC6C	100	48.222	Macaca_mulatta
ENSACLG00000000424	tnrc6c1	99	48.660	ENSMNEG00000030405	TNRC6C	100	48.222	Macaca_nemestrina
ENSACLG00000000424	tnrc6c1	99	48.660	ENSMLEG00000033436	TNRC6C	100	49.390	Mandrillus_leucophaeus
ENSACLG00000000424	tnrc6c1	99	74.733	ENSMAMG00000023613	tnrc6c1	100	73.430	Mastacembelus_armatus
ENSACLG00000000424	tnrc6c1	100	100.000	ENSMZEG00005010920	tnrc6c1	100	100.000	Maylandia_zebra
ENSACLG00000000424	tnrc6c1	99	48.195	ENSMGAG00000003906	TNRC6C	94	43.757	Meleagris_gallopavo
ENSACLG00000000424	tnrc6c1	90	50.508	ENSMAUG00000021618	Tnrc6c	100	47.078	Mesocricetus_auratus
ENSACLG00000000424	tnrc6c1	99	47.847	ENSMICG00000003952	TNRC6C	100	49.446	Microcebus_murinus
ENSACLG00000000424	tnrc6c1	98	50.474	ENSMOCG00000015879	Tnrc6c	96	50.511	Microtus_ochrogaster
ENSACLG00000000424	tnrc6c1	93	75.439	ENSMMOG00000005203	tnrc6c1	100	75.257	Mola_mola
ENSACLG00000000424	tnrc6c1	99	47.632	ENSMODG00000001785	TNRC6C	93	46.966	Monodelphis_domestica
ENSACLG00000000424	tnrc6c1	99	46.397	MGP_CAROLIEiJ_G0017465	Tnrc6c	99	47.068	Mus_caroli
ENSACLG00000000424	tnrc6c1	99	46.642	ENSMUSG00000025571	Tnrc6c	99	47.046	Mus_musculus
ENSACLG00000000424	tnrc6c1	98	50.946	MGP_PahariEiJ_G0018593	Tnrc6c	99	47.043	Mus_pahari
ENSACLG00000000424	tnrc6c1	99	46.432	MGP_SPRETEiJ_G0018309	Tnrc6c	99	46.831	Mus_spretus
ENSACLG00000000424	tnrc6c1	99	52.374	ENSMPUG00000013348	TNRC6C	90	52.378	Mustela_putorius_furo
ENSACLG00000000424	tnrc6c1	93	53.637	ENSMLUG00000014431	TNRC6C	92	46.166	Myotis_lucifugus
ENSACLG00000000424	tnrc6c1	79	50.677	ENSNGAG00000012203	Tnrc6c	73	50.305	Nannospalax_galili
ENSACLG00000000424	tnrc6c1	100	97.020	ENSNBRG00000005344	tnrc6c1	100	97.020	Neolamprologus_brichardi
ENSACLG00000000424	tnrc6c1	99	47.422	ENSNLEG00000000047	TNRC6C	93	47.071	Nomascus_leucogenys
ENSACLG00000000424	tnrc6c1	94	45.279	ENSMEUG00000005104	TNRC6C	98	43.916	Notamacropus_eugenii
ENSACLG00000000424	tnrc6c1	93	52.206	ENSODEG00000012499	TNRC6C	97	51.327	Octodon_degus
ENSACLG00000000424	tnrc6c1	93	85.266	ENSONIG00000002210	tnrc6c1	100	85.792	Oreochromis_niloticus
ENSACLG00000000424	tnrc6c1	73	52.640	ENSOANG00000009758	-	60	54.704	Ornithorhynchus_anatinus
ENSACLG00000000424	tnrc6c1	54	56.857	ENSOCUG00000006122	TNRC6C	87	55.215	Oryctolagus_cuniculus
ENSACLG00000000424	tnrc6c1	99	69.791	ENSORLG00000009837	tnrc6c1	100	81.955	Oryzias_latipes
ENSACLG00000000424	tnrc6c1	99	70.970	ENSORLG00020016510	tnrc6c1	100	71.369	Oryzias_latipes_hni
ENSACLG00000000424	tnrc6c1	78	67.842	ENSORLG00015000171	tnrc6c1	97	68.022	Oryzias_latipes_hsok
ENSACLG00000000424	tnrc6c1	99	72.047	ENSOMEG00000000357	tnrc6c1	99	70.512	Oryzias_melastigma
ENSACLG00000000424	tnrc6c1	92	52.994	ENSOGAG00000007197	TNRC6C	100	48.832	Otolemur_garnettii
ENSACLG00000000424	tnrc6c1	94	49.819	ENSOARG00000006041	TNRC6C	91	45.716	Ovis_aries
ENSACLG00000000424	tnrc6c1	98	53.243	ENSPPAG00000027160	TNRC6C	94	48.419	Pan_paniscus
ENSACLG00000000424	tnrc6c1	79	51.652	ENSPPRG00000018881	TNRC6C	98	50.884	Panthera_pardus
ENSACLG00000000424	tnrc6c1	86	54.545	ENSPTIG00000008791	TNRC6C	71	53.303	Panthera_tigris_altaica
ENSACLG00000000424	tnrc6c1	98	53.243	ENSPTRG00000009699	TNRC6C	94	48.419	Pan_troglodytes
ENSACLG00000000424	tnrc6c1	99	48.660	ENSPANG00000019994	TNRC6C	100	48.167	Papio_anubis
ENSACLG00000000424	tnrc6c1	93	56.220	ENSPKIG00000005428	tnrc6c1	100	55.811	Paramormyrops_kingsleyae
ENSACLG00000000424	tnrc6c1	96	53.352	ENSPSIG00000018069	TNRC6C	99	48.158	Pelodiscus_sinensis
ENSACLG00000000424	tnrc6c1	84	79.365	ENSPMGG00000022911	tnrc6c1	98	78.458	Periophthalmus_magnuspinnatus
ENSACLG00000000424	tnrc6c1	98	51.116	ENSPEMG00000009785	Tnrc6c	100	45.149	Peromyscus_maniculatus_bairdii
ENSACLG00000000424	tnrc6c1	99	75.112	ENSPFOG00000012560	tnrc6c1	98	72.819	Poecilia_formosa
ENSACLG00000000424	tnrc6c1	93	73.979	ENSPLAG00000021055	tnrc6c1	100	72.561	Poecilia_latipinna
ENSACLG00000000424	tnrc6c1	98	53.533	ENSPPYG00000008679	TNRC6C	92	48.677	Pongo_abelii
ENSACLG00000000424	tnrc6c1	84	61.822	ENSPCAG00000012510	TNRC6C	89	61.388	Procavia_capensis
ENSACLG00000000424	tnrc6c1	93	48.978	ENSPCOG00000021451	TNRC6C	100	49.530	Propithecus_coquereli
ENSACLG00000000424	tnrc6c1	87	66.949	ENSPVAG00000002008	TNRC6C	95	66.102	Pteropus_vampyrus
ENSACLG00000000424	tnrc6c1	100	97.960	ENSPNYG00000014477	tnrc6c1	100	97.960	Pundamilia_nyererei
ENSACLG00000000424	tnrc6c1	78	51.513	ENSRNOG00000022395	Tnrc6c	98	46.979	Rattus_norvegicus
ENSACLG00000000424	tnrc6c1	99	48.660	ENSRBIG00000027777	TNRC6C	100	48.806	Rhinopithecus_bieti
ENSACLG00000000424	tnrc6c1	99	48.660	ENSRROG00000042912	TNRC6C	100	48.806	Rhinopithecus_roxellana
ENSACLG00000000424	tnrc6c1	99	48.687	ENSSBOG00000023981	TNRC6C	100	49.445	Saimiri_boliviensis_boliviensis
ENSACLG00000000424	tnrc6c1	53	65.635	ENSSHAG00000018330	-	99	64.839	Sarcophilus_harrisii
ENSACLG00000000424	tnrc6c1	54	61.398	ENSSFOG00015004735	-	99	67.095	Scleropages_formosus
ENSACLG00000000424	tnrc6c1	99	57.143	ENSSFOG00015006475	tnrc6c1	96	56.091	Scleropages_formosus
ENSACLG00000000424	tnrc6c1	99	73.554	ENSSMAG00000012761	tnrc6c1	99	72.000	Scophthalmus_maximus
ENSACLG00000000424	tnrc6c1	100	75.862	ENSSDUG00000002366	tnrc6c1	100	72.439	Seriola_dumerili
ENSACLG00000000424	tnrc6c1	93	75.758	ENSSLDG00000025613	tnrc6c1	71	78.053	Seriola_lalandi_dorsalis
ENSACLG00000000424	tnrc6c1	64	68.067	ENSSARG00000006816	TNRC6C	90	66.387	Sorex_araneus
ENSACLG00000000424	tnrc6c1	97	77.575	ENSSPAG00000014977	tnrc6c1	97	78.182	Stegastes_partitus
ENSACLG00000000424	tnrc6c1	78	64.348	ENSSSCG00000034373	TNRC6C	81	69.120	Sus_scrofa
ENSACLG00000000424	tnrc6c1	94	53.544	ENSTGUG00000007733	TNRC6C	99	47.873	Taeniopygia_guttata
ENSACLG00000000424	tnrc6c1	99	70.435	ENSTRUG00000011685	tnrc6c1	100	71.385	Takifugu_rubripes
ENSACLG00000000424	tnrc6c1	99	69.540	ENSTNIG00000005273	tnrc6c1	100	77.052	Tetraodon_nigroviridis
ENSACLG00000000424	tnrc6c1	65	48.114	ENSTBEG00000005046	TNRC6C	95	46.423	Tupaia_belangeri
ENSACLG00000000424	tnrc6c1	97	51.501	ENSTTRG00000010828	TNRC6C	99	47.852	Tursiops_truncatus
ENSACLG00000000424	tnrc6c1	98	50.878	ENSUMAG00000013614	TNRC6C	93	47.310	Ursus_maritimus
ENSACLG00000000424	tnrc6c1	51	54.932	ENSVPAG00000006765	-	91	53.620	Vicugna_pacos
ENSACLG00000000424	tnrc6c1	79	52.524	ENSVVUG00000015268	TNRC6C	82	52.120	Vulpes_vulpes
ENSACLG00000000424	tnrc6c1	85	48.864	ENSXETG00000019470	tnrc6c	99	46.810	Xenopus_tropicalis
ENSACLG00000000424	tnrc6c1	100	72.950	ENSXMAG00000025971	tnrc6c1	100	72.404	Xiphophorus_maculatus