EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000000473 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4326 bases
Position: chr3:44641524-44645849
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	1	13
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	2	13
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	3	13
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	4	13
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	5	13
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	6	13
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	7	13
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	8	13
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	9	13
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	10	13
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	11	13
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	12	13
ENSACLP00000000638	zf-C2H2	PF00096.26	6.4e-67	13	13
ENSACLP00000000638	zf-met	PF12874.7	1.5e-22	1	2
ENSACLP00000000638	zf-met	PF12874.7	1.5e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000000653	-	1419	-	ENSACLP00000000638	472 (aa)	-	-

Gene Model

Click here to download ENSACLG00000000473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000000473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000000473	-	82	55.013	ENSACLG00000007749	-	78	55.013
ENSACLG00000000473	-	95	73.727	ENSACLG00000001018	-	92	73.727
ENSACLG00000000473	-	81	48.705	ENSACLG00000025196	-	81	48.705
ENSACLG00000000473	-	81	50.303	ENSACLG00000020474	-	83	50.303
ENSACLG00000000473	-	78	47.458	ENSACLG00000011710	-	56	47.458
ENSACLG00000000473	-	83	45.545	ENSACLG00000018700	-	98	45.545
ENSACLG00000000473	-	83	76.139	ENSACLG00000018701	-	75	76.139
ENSACLG00000000473	-	79	47.222	ENSACLG00000018707	-	90	47.222
ENSACLG00000000473	-	81	40.066	ENSACLG00000027424	-	64	40.066
ENSACLG00000000473	-	82	48.876	ENSACLG00000023305	-	88	48.876
ENSACLG00000000473	-	87	45.783	ENSACLG00000017939	-	96	47.453
ENSACLG00000000473	-	78	34.559	ENSACLG00000007162	scrt1b	52	34.559
ENSACLG00000000473	-	88	52.451	ENSACLG00000003229	-	98	52.451
ENSACLG00000000473	-	89	44.161	ENSACLG00000017321	-	86	44.161
ENSACLG00000000473	-	89	76.341	ENSACLG00000017329	-	92	73.177
ENSACLG00000000473	-	79	53.226	ENSACLG00000001003	-	88	53.226
ENSACLG00000000473	-	83	40.800	ENSACLG00000016841	-	68	40.800
ENSACLG00000000473	-	84	44.056	ENSACLG00000020260	-	99	46.193
ENSACLG00000000473	-	87	40.447	ENSACLG00000017925	-	72	43.655
ENSACLG00000000473	-	95	76.944	ENSACLG00000000411	-	96	76.944
ENSACLG00000000473	-	81	58.065	ENSACLG00000022360	-	98	55.963
ENSACLG00000000473	-	88	42.745	ENSACLG00000017449	-	69	42.745
ENSACLG00000000473	-	90	44.251	ENSACLG00000015462	-	75	44.251
ENSACLG00000000473	-	92	69.417	ENSACLG00000022497	-	98	69.417
ENSACLG00000000473	-	82	46.528	ENSACLG00000024670	-	76	46.528
ENSACLG00000000473	-	78	53.448	ENSACLG00000004663	-	77	53.448
ENSACLG00000000473	-	82	46.311	ENSACLG00000014600	-	90	44.350
ENSACLG00000000473	-	78	42.697	ENSACLG00000001258	-	88	42.697
ENSACLG00000000473	-	87	46.154	ENSACLG00000020975	-	89	46.154
ENSACLG00000000473	-	82	33.948	ENSACLG00000022287	-	65	33.948
ENSACLG00000000473	-	80	49.398	ENSACLG00000019424	-	97	40.123
ENSACLG00000000473	-	82	47.383	ENSACLG00000024491	-	82	47.383
ENSACLG00000000473	-	79	72.700	ENSACLG00000022499	-	81	72.700
ENSACLG00000000473	-	79	44.094	ENSACLG00000021056	-	61	44.094
ENSACLG00000000473	-	79	47.368	ENSACLG00000005615	-	53	47.368
ENSACLG00000000473	-	79	46.377	ENSACLG00000005795	-	62	46.377
ENSACLG00000000473	-	91	74.483	ENSACLG00000000487	-	94	74.483
ENSACLG00000000473	-	90	61.772	ENSACLG00000019499	-	90	61.772
ENSACLG00000000473	-	83	37.037	ENSACLG00000018551	snai2	64	37.037
ENSACLG00000000473	-	84	56.055	ENSACLG00000022475	-	96	54.406
ENSACLG00000000473	-	87	46.305	ENSACLG00000019318	-	97	45.013
ENSACLG00000000473	-	89	66.667	ENSACLG00000019482	-	85	66.667
ENSACLG00000000473	-	82	32.880	ENSACLG00000020579	znf319b	87	32.880
ENSACLG00000000473	-	89	44.615	ENSACLG00000018746	-	90	42.202
ENSACLG00000000473	-	83	43.523	ENSACLG00000021045	-	79	43.523
ENSACLG00000000473	-	79	43.860	ENSACLG00000017801	-	64	43.860
ENSACLG00000000473	-	81	46.930	ENSACLG00000024459	-	83	46.930
ENSACLG00000000473	-	85	46.522	ENSACLG00000013454	-	63	46.522
ENSACLG00000000473	-	79	55.357	ENSACLG00000016405	zbtb17	54	45.455
ENSACLG00000000473	-	80	48.780	ENSACLG00000022482	-	92	48.780
ENSACLG00000000473	-	79	53.892	ENSACLG00000024294	-	75	53.892
ENSACLG00000000473	-	86	45.455	ENSACLG00000008624	-	78	45.455
ENSACLG00000000473	-	79	34.286	ENSACLG00000022305	-	89	33.465
ENSACLG00000000473	-	93	64.316	ENSACLG00000022302	-	99	65.068
ENSACLG00000000473	-	85	41.003	ENSACLG00000026538	-	83	41.993
ENSACLG00000000473	-	81	48.659	ENSACLG00000011237	-	99	46.711
ENSACLG00000000473	-	80	33.005	ENSACLG00000022191	znf407	68	33.005
ENSACLG00000000473	-	80	46.429	ENSACLG00000005708	-	89	43.452
ENSACLG00000000473	-	90	61.074	ENSACLG00000003546	-	66	61.074
ENSACLG00000000473	-	83	38.762	ENSACLG00000017996	prdm5	72	38.762
ENSACLG00000000473	-	80	45.614	ENSACLG00000014336	-	93	45.614
ENSACLG00000000473	-	81	40.606	ENSACLG00000019094	-	73	40.606
ENSACLG00000000473	-	89	52.968	ENSACLG00000014176	-	94	52.968
ENSACLG00000000473	-	84	41.379	ENSACLG00000026187	-	52	41.379
ENSACLG00000000473	-	83	49.153	ENSACLG00000006718	-	53	49.153
ENSACLG00000000473	-	85	37.850	ENSACLG00000006697	-	76	35.802
ENSACLG00000000473	-	86	49.296	ENSACLG00000024308	-	98	52.174
ENSACLG00000000473	-	87	53.952	ENSACLG00000015816	-	98	63.043
ENSACLG00000000473	-	79	43.548	ENSACLG00000021022	-	66	43.548
ENSACLG00000000473	-	83	34.021	ENSACLG00000020231	-	92	34.884
ENSACLG00000000473	-	88	50.000	ENSACLG00000021184	-	59	50.000
ENSACLG00000000473	-	94	45.178	ENSACLG00000021343	-	98	43.377
ENSACLG00000000473	-	86	49.550	ENSACLG00000001368	-	92	49.550
ENSACLG00000000473	-	92	63.964	ENSACLG00000002844	-	90	63.964
ENSACLG00000000473	-	82	76.190	ENSACLG00000028002	-	92	76.190
ENSACLG00000000473	-	83	38.849	ENSACLG00000013531	-	95	38.849
ENSACLG00000000473	-	86	42.661	ENSACLG00000022505	-	86	44.040
ENSACLG00000000473	-	80	44.068	ENSACLG00000006702	-	77	38.889
ENSACLG00000000473	-	82	53.244	ENSACLG00000007888	-	77	55.897
ENSACLG00000000473	-	83	48.742	ENSACLG00000017411	-	87	48.742
ENSACLG00000000473	-	80	42.574	ENSACLG00000019167	-	90	37.073
ENSACLG00000000473	-	81	39.175	ENSACLG00000020615	-	71	39.175
ENSACLG00000000473	-	77	44.789	ENSACLG00000020610	-	66	44.789
ENSACLG00000000473	-	87	57.895	ENSACLG00000019349	-	76	58.445
ENSACLG00000000473	-	84	34.510	ENSACLG00000016648	-	76	34.510
ENSACLG00000000473	-	83	41.264	ENSACLG00000017941	-	65	41.264
ENSACLG00000000473	-	93	76.037	ENSACLG00000000537	-	97	72.671
ENSACLG00000000473	-	81	37.539	ENSACLG00000000102	-	61	37.539
ENSACLG00000000473	-	81	76.289	ENSACLG00000018716	-	91	76.289
ENSACLG00000000473	-	82	40.719	ENSACLG00000027053	gfi1b	69	40.719
ENSACLG00000000473	-	85	48.204	ENSACLG00000025163	-	86	48.204
ENSACLG00000000473	-	87	70.449	ENSACLG00000001045	-	98	70.449
ENSACLG00000000473	-	92	60.160	ENSACLG00000022383	-	95	64.615
ENSACLG00000000473	-	88	48.846	ENSACLG00000025251	-	99	46.175
ENSACLG00000000473	-	82	34.940	ENSACLG00000012712	znf646	85	32.773
ENSACLG00000000473	-	79	45.509	ENSACLG00000008374	-	55	45.509
ENSACLG00000000473	-	77	46.429	ENSACLG00000013935	-	85	46.429
ENSACLG00000000473	-	80	48.416	ENSACLG00000019674	-	93	49.772
ENSACLG00000000473	-	91	54.783	ENSACLG00000014365	-	99	54.783
ENSACLG00000000473	-	87	44.526	ENSACLG00000017849	-	84	53.846
ENSACLG00000000473	-	81	41.699	ENSACLG00000020268	-	70	41.699
ENSACLG00000000473	-	85	33.889	ENSACLG00000014349	znf341	50	33.712
ENSACLG00000000473	-	83	75.676	ENSACLG00000000521	-	97	75.676
ENSACLG00000000473	-	79	52.395	ENSACLG00000021846	-	86	52.395
ENSACLG00000000473	-	85	43.860	ENSACLG00000017576	-	94	43.860
ENSACLG00000000473	-	80	43.049	ENSACLG00000006870	-	63	43.049
ENSACLG00000000473	-	81	58.840	ENSACLG00000015843	-	88	58.840
ENSACLG00000000473	-	95	75.087	ENSACLG00000011239	-	87	71.293
ENSACLG00000000473	-	83	61.773	ENSACLG00000023963	-	91	61.773
ENSACLG00000000473	-	84	42.149	ENSACLG00000027692	-	78	42.149
ENSACLG00000000473	-	79	44.025	ENSACLG00000011642	-	78	44.025
ENSACLG00000000473	-	79	56.325	ENSACLG00000003332	-	99	58.065
ENSACLG00000000473	-	79	44.109	ENSACLG00000020393	-	87	41.969
ENSACLG00000000473	-	82	45.455	ENSACLG00000003679	-	90	45.455
ENSACLG00000000473	-	85	50.340	ENSACLG00000019291	-	90	50.340
ENSACLG00000000473	-	83	44.595	ENSACLG00000017487	-	70	44.595
ENSACLG00000000473	-	85	43.137	ENSACLG00000013033	-	88	43.137
ENSACLG00000000473	-	83	74.038	ENSACLG00000001507	-	82	74.038
ENSACLG00000000473	-	79	53.704	ENSACLG00000023979	-	96	50.265
ENSACLG00000000473	-	84	48.230	ENSACLG00000026703	-	73	48.230
ENSACLG00000000473	-	82	39.834	ENSACLG00000008606	-	88	40.830
ENSACLG00000000473	-	84	49.451	ENSACLG00000024957	-	94	49.451
ENSACLG00000000473	-	82	48.936	ENSACLG00000024647	-	79	48.936
ENSACLG00000000473	-	87	35.165	ENSACLG00000005594	ZNF319	92	35.165
ENSACLG00000000473	-	85	43.673	ENSACLG00000015989	-	93	43.673
ENSACLG00000000473	-	83	49.153	ENSACLG00000020333	-	53	49.153
ENSACLG00000000473	-	79	43.348	ENSACLG00000020339	-	53	43.348
ENSACLG00000000473	-	81	37.584	ENSACLG00000011658	-	88	37.584
ENSACLG00000000473	-	85	48.018	ENSACLG00000019270	-	86	48.018
ENSACLG00000000473	-	79	56.928	ENSACLG00000006528	-	97	56.928
ENSACLG00000000473	-	79	41.520	ENSACLG00000022439	-	79	41.520
ENSACLG00000000473	-	84	47.639	ENSACLG00000023513	-	82	47.639
ENSACLG00000000473	-	89	49.393	ENSACLG00000008821	-	99	51.208
ENSACLG00000000473	-	85	56.183	ENSACLG00000023941	-	89	56.183
ENSACLG00000000473	-	82	66.400	ENSACLG00000014167	-	60	66.400
ENSACLG00000000473	-	84	72.634	ENSACLG00000017336	-	92	72.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000000473	-	88	56.174	ENSACIG00000017644	-	87	56.174	Amphilophus_citrinellus
ENSACLG00000000473	-	87	57.300	ENSHBUG00000006250	-	93	57.300	Haplochromis_burtoni
ENSACLG00000000473	-	91	60.000	ENSMZEG00005020759	-	99	60.000	Maylandia_zebra
ENSACLG00000000473	-	83	75.429	ENSMZEG00005021801	-	79	75.429	Maylandia_zebra
ENSACLG00000000473	-	81	68.371	ENSMZEG00005012727	-	69	68.044	Maylandia_zebra
ENSACLG00000000473	-	87	73.410	ENSNBRG00000001608	-	100	73.410	Neolamprologus_brichardi
ENSACLG00000000473	-	91	55.357	ENSNBRG00000009815	-	91	55.357	Neolamprologus_brichardi
ENSACLG00000000473	-	90	70.345	ENSNBRG00000002542	-	99	70.345	Neolamprologus_brichardi
ENSACLG00000000473	-	80	66.234	ENSONIG00000007886	-	99	62.682	Oreochromis_niloticus
ENSACLG00000000473	-	90	71.131	ENSPNYG00000005777	-	99	68.908	Pundamilia_nyererei
ENSACLG00000000473	-	91	58.561	ENSPNYG00000023637	-	85	58.561	Pundamilia_nyererei
ENSACLG00000000473	-	91	92.857	ENSPNYG00000023916	-	93	92.857	Pundamilia_nyererei
ENSACLG00000000473	-	95	68.670	ENSPNYG00000021571	-	95	64.368	Pundamilia_nyererei