EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000000520 (Gene tree)
Gene ID: 113037329
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 6275 bases
Position: chr15:36625373-36631647
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000000746	MMR_HSR1	PF01926.23	6.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000000766	-	1947	-	ENSACLP00000000746	648 (aa)	-	-

Gene Model

Click here to download ENSACLG00000000520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000000520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000000520	lsg1	67	30.365	ENSACLG00000025394	gnl1	65	38.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000000520	lsg1	99	65.053	ENSG00000041802	LSG1	98	74.713	Homo_sapiens
ENSACLG00000000520	lsg1	100	80.458	ENSAPOG00000009694	lsg1	100	80.828	Acanthochromis_polyacanthus
ENSACLG00000000520	lsg1	100	62.874	ENSAMEG00000009343	LSG1	100	62.687	Ailuropoda_melanoleuca
ENSACLG00000000520	lsg1	98	89.953	ENSACIG00000012406	lsg1	100	89.846	Amphilophus_citrinellus
ENSACLG00000000520	lsg1	100	80.335	ENSAOCG00000016066	lsg1	100	81.135	Amphiprion_ocellaris
ENSACLG00000000520	lsg1	100	80.183	ENSAPEG00000003252	lsg1	100	80.982	Amphiprion_percula
ENSACLG00000000520	lsg1	98	82.704	ENSATEG00000011794	lsg1	100	82.589	Anabas_testudineus
ENSACLG00000000520	lsg1	95	60.597	ENSACAG00000004222	LSG1	100	60.436	Anolis_carolinensis
ENSACLG00000000520	lsg1	99	65.106	ENSANAG00000021153	LSG1	99	63.868	Aotus_nancymaae
ENSACLG00000000520	lsg1	100	72.741	ENSAMXG00000008271	lsg1	100	73.171	Astyanax_mexicanus
ENSACLG00000000520	lsg1	99	63.582	ENSBTAG00000008461	LSG1	99	63.731	Bos_taurus
ENSACLG00000000520	lsg1	76	44.898	WBGene00016907	C53H9.2	91	51.852	Caenorhabditis_elegans
ENSACLG00000000520	lsg1	99	65.106	ENSCJAG00000013962	LSG1	99	64.018	Callithrix_jacchus
ENSACLG00000000520	lsg1	95	64.263	ENSCAFG00000013445	LSG1	100	64.734	Canis_familiaris
ENSACLG00000000520	lsg1	100	63.459	ENSCAFG00020002216	LSG1	100	63.839	Canis_lupus_dingo
ENSACLG00000000520	lsg1	100	63.910	ENSCHIG00000015769	LSG1	100	64.350	Capra_hircus
ENSACLG00000000520	lsg1	99	63.333	ENSTSYG00000001447	LSG1	99	63.213	Carlito_syrichta
ENSACLG00000000520	lsg1	95	64.830	ENSCAPG00000009856	LSG1	99	65.154	Cavia_aperea
ENSACLG00000000520	lsg1	99	64.902	ENSCCAG00000035744	LSG1	99	63.664	Cebus_capucinus
ENSACLG00000000520	lsg1	99	64.199	ENSCATG00000042060	LSG1	99	62.069	Cercocebus_atys
ENSACLG00000000520	lsg1	99	64.048	ENSCSAG00000008796	LSG1	92	64.091	Chlorocebus_sabaeus
ENSACLG00000000520	lsg1	100	66.368	ENSCPBG00000015941	LSG1	83	65.588	Chrysemys_picta_bellii
ENSACLG00000000520	lsg1	77	53.012	ENSCING00000007079	-	94	59.184	Ciona_intestinalis
ENSACLG00000000520	lsg1	77	54.217	ENSCSAVG00000002514	-	97	54.217	Ciona_savignyi
ENSACLG00000000520	lsg1	99	63.746	ENSCANG00000030709	LSG1	99	62.819	Colobus_angolensis_palliatus
ENSACLG00000000520	lsg1	99	63.872	ENSCGRG00001019846	Lsg1	99	64.482	Cricetulus_griseus_chok1gshd
ENSACLG00000000520	lsg1	99	63.374	ENSCGRG00000014617	Lsg1	99	63.718	Cricetulus_griseus_crigri
ENSACLG00000000520	lsg1	98	78.793	ENSCSEG00000008522	lsg1	100	78.604	Cynoglossus_semilaevis
ENSACLG00000000520	lsg1	98	80.411	ENSCVAG00000002484	lsg1	100	80.277	Cyprinodon_variegatus
ENSACLG00000000520	lsg1	100	74.504	ENSDARG00000015352	lsg1	100	74.656	Danio_rerio
ENSACLG00000000520	lsg1	99	63.040	ENSDNOG00000006224	LSG1	99	62.593	Dasypus_novemcinctus
ENSACLG00000000520	lsg1	99	48.323	FBgn0266284	Ns3	99	48.628	Drosophila_melanogaster
ENSACLG00000000520	lsg1	88	74.667	ENSETEG00000003888	LSG1	89	74.667	Echinops_telfairi
ENSACLG00000000520	lsg1	88	54.651	ENSEBUG00000003119	lsg1	85	54.319	Eptatretus_burgeri
ENSACLG00000000520	lsg1	99	62.261	ENSEASG00005000678	LSG1	99	63.772	Equus_asinus_asinus
ENSACLG00000000520	lsg1	99	62.261	ENSECAG00000017659	LSG1	99	63.378	Equus_caballus
ENSACLG00000000520	lsg1	87	58.974	ENSEEUG00000015217	LSG1	87	58.974	Erinaceus_europaeus
ENSACLG00000000520	lsg1	100	70.739	ENSELUG00000023973	lsg1	100	71.342	Esox_lucius
ENSACLG00000000520	lsg1	100	63.582	ENSFCAG00000024957	LSG1	100	63.731	Felis_catus
ENSACLG00000000520	lsg1	99	59.492	ENSFALG00000007210	LSG1	99	59.459	Ficedula_albicollis
ENSACLG00000000520	lsg1	99	62.538	ENSFDAG00000017373	LSG1	99	64.482	Fukomys_damarensis
ENSACLG00000000520	lsg1	98	81.250	ENSFHEG00000003680	lsg1	100	81.431	Fundulus_heteroclitus
ENSACLG00000000520	lsg1	98	68.955	ENSGMOG00000015834	lsg1	91	76.623	Gadus_morhua
ENSACLG00000000520	lsg1	99	60.060	ENSGALG00000007058	LSG1	87	60.954	Gallus_gallus
ENSACLG00000000520	lsg1	98	81.073	ENSGAFG00000015831	lsg1	100	81.231	Gambusia_affinis
ENSACLG00000000520	lsg1	98	79.907	ENSGACG00000009323	lsg1	100	79.847	Gasterosteus_aculeatus
ENSACLG00000000520	lsg1	99	62.979	ENSGGOG00000000520	LSG1	99	63.174	Gorilla_gorilla
ENSACLG00000000520	lsg1	100	98.457	ENSHBUG00000005659	lsg1	100	98.457	Haplochromis_burtoni
ENSACLG00000000520	lsg1	99	62.006	ENSHGLG00000017390	LSG1	99	62.387	Heterocephalus_glaber_female
ENSACLG00000000520	lsg1	99	62.006	ENSHGLG00100018587	LSG1	99	62.387	Heterocephalus_glaber_male
ENSACLG00000000520	lsg1	98	79.495	ENSHCOG00000016848	lsg1	100	79.385	Hippocampus_comes
ENSACLG00000000520	lsg1	100	72.894	ENSIPUG00000008631	lsg1	100	73.201	Ictalurus_punctatus
ENSACLG00000000520	lsg1	75	57.534	ENSSTOG00000010234	LSG1	92	59.881	Ictidomys_tridecemlineatus
ENSACLG00000000520	lsg1	99	63.982	ENSJJAG00000015513	Lsg1	99	64.286	Jaculus_jaculus
ENSACLG00000000520	lsg1	98	76.646	ENSKMAG00000009681	lsg1	100	76.959	Kryptolebias_marmoratus
ENSACLG00000000520	lsg1	98	77.865	ENSLBEG00000024261	lsg1	100	78.769	Labrus_bergylta
ENSACLG00000000520	lsg1	100	65.574	ENSLACG00000013399	LSG1	100	65.574	Latimeria_chalumnae
ENSACLG00000000520	lsg1	98	71.163	ENSLOCG00000004918	lsg1	100	71.644	Lepisosteus_oculatus
ENSACLG00000000520	lsg1	99	63.855	ENSLAFG00000012919	-	99	64.242	Loxodonta_africana
ENSACLG00000000520	lsg1	99	64.048	ENSMFAG00000039903	LSG1	99	61.919	Macaca_fascicularis
ENSACLG00000000520	lsg1	99	64.048	ENSMMUG00000010708	LSG1	99	63.118	Macaca_mulatta
ENSACLG00000000520	lsg1	99	64.048	ENSMNEG00000031538	LSG1	99	62.219	Macaca_nemestrina
ENSACLG00000000520	lsg1	99	64.091	ENSMLEG00000041184	LSG1	99	63.118	Mandrillus_leucophaeus
ENSACLG00000000520	lsg1	100	79.511	ENSMAMG00000000470	lsg1	100	79.511	Mastacembelus_armatus
ENSACLG00000000520	lsg1	100	98.457	ENSMZEG00005017865	lsg1	100	98.457	Maylandia_zebra
ENSACLG00000000520	lsg1	88	61.486	ENSMGAG00000007050	LSG1	99	62.353	Meleagris_gallopavo
ENSACLG00000000520	lsg1	91	61.111	ENSMAUG00000016976	Lsg1	93	63.167	Mesocricetus_auratus
ENSACLG00000000520	lsg1	99	63.374	ENSMICG00000049087	LSG1	99	62.012	Microcebus_murinus
ENSACLG00000000520	lsg1	99	63.126	ENSMOCG00000022136	Lsg1	99	63.957	Microtus_ochrogaster
ENSACLG00000000520	lsg1	85	89.796	ENSMMOG00000008884	lsg1	100	75.655	Mola_mola
ENSACLG00000000520	lsg1	99	55.335	ENSMODG00000019828	LSG1	99	55.335	Monodelphis_domestica
ENSACLG00000000520	lsg1	100	63.939	MGP_CAROLIEiJ_G0020648	Lsg1	100	64.545	Mus_caroli
ENSACLG00000000520	lsg1	100	62.556	ENSMUSG00000022538	Lsg1	100	64.091	Mus_musculus
ENSACLG00000000520	lsg1	98	64.441	MGP_PahariEiJ_G0016352	Lsg1	100	64.036	Mus_pahari
ENSACLG00000000520	lsg1	100	62.407	MGP_SPRETEiJ_G0021544	Lsg1	100	64.199	Mus_spretus
ENSACLG00000000520	lsg1	100	63.459	ENSMPUG00000003734	LSG1	100	63.554	Mustela_putorius_furo
ENSACLG00000000520	lsg1	100	63.095	ENSMLUG00000012548	LSG1	100	63.636	Myotis_lucifugus
ENSACLG00000000520	lsg1	99	63.945	ENSNGAG00000021872	Lsg1	99	64.000	Nannospalax_galili
ENSACLG00000000520	lsg1	99	63.678	ENSNLEG00000008293	LSG1	99	64.297	Nomascus_leucogenys
ENSACLG00000000520	lsg1	67	68.041	ENSMEUG00000009041	-	84	68.041	Notamacropus_eugenii
ENSACLG00000000520	lsg1	100	95.872	ENSONIG00000002635	lsg1	100	95.872	Oreochromis_niloticus
ENSACLG00000000520	lsg1	95	65.934	ENSOANG00000012742	LSG1	99	65.120	Ornithorhynchus_anatinus
ENSACLG00000000520	lsg1	99	63.785	ENSOCUG00000004817	LSG1	99	63.785	Oryctolagus_cuniculus
ENSACLG00000000520	lsg1	98	77.987	ENSORLG00000007695	lsg1	100	78.428	Oryzias_latipes
ENSACLG00000000520	lsg1	98	78.774	ENSORLG00020016286	lsg1	100	78.737	Oryzias_latipes_hni
ENSACLG00000000520	lsg1	98	77.008	ENSORLG00015012025	lsg1	100	77.469	Oryzias_latipes_hsok
ENSACLG00000000520	lsg1	98	77.708	ENSOMEG00000022379	lsg1	100	77.948	Oryzias_melastigma
ENSACLG00000000520	lsg1	99	63.595	ENSOGAG00000003475	LSG1	99	63.338	Otolemur_garnettii
ENSACLG00000000520	lsg1	100	63.798	ENSOARG00000020403	LSG1	100	63.056	Ovis_aries
ENSACLG00000000520	lsg1	99	64.318	ENSPPAG00000029271	LSG1	99	63.229	Pan_paniscus
ENSACLG00000000520	lsg1	100	62.777	ENSPPRG00000010281	LSG1	100	62.925	Panthera_pardus
ENSACLG00000000520	lsg1	100	63.582	ENSPTIG00000010789	LSG1	100	63.731	Panthera_tigris_altaica
ENSACLG00000000520	lsg1	99	64.168	ENSPTRG00000015760	LSG1	99	63.568	Pan_troglodytes
ENSACLG00000000520	lsg1	99	63.897	ENSPANG00000018249	LSG1	99	61.769	Papio_anubis
ENSACLG00000000520	lsg1	99	71.210	ENSPKIG00000002895	lsg1	99	72.366	Paramormyrops_kingsleyae
ENSACLG00000000520	lsg1	96	59.455	ENSPSIG00000009821	LSG1	99	58.396	Pelodiscus_sinensis
ENSACLG00000000520	lsg1	95	75.563	ENSPMGG00000000931	lsg1	100	75.563	Periophthalmus_magnuspinnatus
ENSACLG00000000520	lsg1	99	63.415	ENSPEMG00000012082	-	99	62.519	Peromyscus_maniculatus_bairdii
ENSACLG00000000520	lsg1	99	59.496	ENSPMAG00000007451	lsg1	99	59.940	Petromyzon_marinus
ENSACLG00000000520	lsg1	98	66.667	ENSPCIG00000013890	LSG1	81	66.667	Phascolarctos_cinereus
ENSACLG00000000520	lsg1	98	81.575	ENSPFOG00000021882	lsg1	100	81.720	Poecilia_formosa
ENSACLG00000000520	lsg1	98	81.073	ENSPLAG00000019536	lsg1	100	80.923	Poecilia_latipinna
ENSACLG00000000520	lsg1	98	80.534	ENSPMEG00000017281	lsg1	100	80.858	Poecilia_mexicana
ENSACLG00000000520	lsg1	98	70.186	ENSPREG00000006048	lsg1	100	69.848	Poecilia_reticulata
ENSACLG00000000520	lsg1	92	62.825	ENSPPYG00000014425	LSG1	100	62.175	Pongo_abelii
ENSACLG00000000520	lsg1	90	72.000	ENSPCAG00000005511	LSG1	90	72.000	Procavia_capensis
ENSACLG00000000520	lsg1	99	63.333	ENSPCOG00000012360	LSG1	99	63.158	Propithecus_coquereli
ENSACLG00000000520	lsg1	100	99.691	ENSPNYG00000021994	lsg1	100	99.691	Pundamilia_nyererei
ENSACLG00000000520	lsg1	100	74.390	ENSPNAG00000015533	lsg1	100	74.238	Pygocentrus_nattereri
ENSACLG00000000520	lsg1	100	62.388	ENSRNOG00000001727	Lsg1	100	64.340	Rattus_norvegicus
ENSACLG00000000520	lsg1	99	62.482	ENSRBIG00000029053	LSG1	99	63.333	Rhinopithecus_bieti
ENSACLG00000000520	lsg1	99	62.482	ENSRROG00000037702	LSG1	99	63.333	Rhinopithecus_roxellana
ENSACLG00000000520	lsg1	76	44.770	YGL099W	LSG1	69	54.438	Saccharomyces_cerevisiae
ENSACLG00000000520	lsg1	99	65.106	ENSSBOG00000034938	LSG1	99	64.502	Saimiri_boliviensis_boliviensis
ENSACLG00000000520	lsg1	78	60.338	ENSSHAG00000003487	LSG1	100	60.902	Sarcophilus_harrisii
ENSACLG00000000520	lsg1	98	72.214	ENSSFOG00015008955	lsg1	100	72.657	Scleropages_formosus
ENSACLG00000000520	lsg1	98	85.423	ENSSDUG00000004622	lsg1	100	85.407	Seriola_dumerili
ENSACLG00000000520	lsg1	98	83.072	ENSSLDG00000010869	lsg1	100	83.103	Seriola_lalandi_dorsalis
ENSACLG00000000520	lsg1	81	66.272	ENSSARG00000012981	LSG1	84	62.534	Sorex_araneus
ENSACLG00000000520	lsg1	100	66.063	ENSSPUG00000016347	LSG1	100	66.063	Sphenodon_punctatus
ENSACLG00000000520	lsg1	100	80.952	ENSSPAG00000005508	lsg1	100	81.413	Stegastes_partitus
ENSACLG00000000520	lsg1	100	61.898	ENSSSCG00000011827	LSG1	100	62.766	Sus_scrofa
ENSACLG00000000520	lsg1	89	60.927	ENSTGUG00000009068	LSG1	100	60.164	Taeniopygia_guttata
ENSACLG00000000520	lsg1	98	75.705	ENSTRUG00000017380	lsg1	100	75.994	Takifugu_rubripes
ENSACLG00000000520	lsg1	98	79.717	ENSTNIG00000015570	lsg1	100	80.061	Tetraodon_nigroviridis
ENSACLG00000000520	lsg1	100	59.552	ENSTTRG00000000559	LSG1	100	58.806	Tursiops_truncatus
ENSACLG00000000520	lsg1	100	62.727	ENSUAMG00000012454	LSG1	100	62.669	Ursus_americanus
ENSACLG00000000520	lsg1	100	62.727	ENSUMAG00000000855	LSG1	100	62.669	Ursus_maritimus
ENSACLG00000000520	lsg1	95	61.041	ENSVPAG00000012400	LSG1	100	60.726	Vicugna_pacos
ENSACLG00000000520	lsg1	95	64.013	ENSVVUG00000008956	LSG1	99	62.575	Vulpes_vulpes
ENSACLG00000000520	lsg1	100	66.667	ENSXETG00000003451	lsg1	100	67.026	Xenopus_tropicalis
ENSACLG00000000520	lsg1	98	82.148	ENSXCOG00000003239	lsg1	100	82.435	Xiphophorus_couchianus
ENSACLG00000000520	lsg1	98	80.462	ENSXMAG00000005536	lsg1	100	80.631	Xiphophorus_maculatus