EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000000546 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 3581 bases
Position: chr12:4170687-4174267
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000000738	Las1	PF04031.13	1.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000000758	-	513	-	ENSACLP00000000738	170 (aa)	-	-

Gene Model

Click here to download ENSACLG00000000546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000000546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000000546	-	62	89.623	ENSACLG00000000371	-	97	90.476
ENSACLG00000000546	-	100	98.824	ENSACLG00000000531	-	100	98.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000000546	-	58	79.798	ENSACIG00000006110	-	86	79.798	Amphilophus_citrinellus
ENSACLG00000000546	-	58	81.633	ENSAOCG00000018705	-	69	81.633	Amphiprion_ocellaris
ENSACLG00000000546	-	58	81.633	ENSAPEG00000017704	-	69	81.633	Amphiprion_percula
ENSACLG00000000546	-	63	71.963	ENSCVAG00000011585	-	96	71.963	Cyprinodon_variegatus
ENSACLG00000000546	-	58	75.510	ENSGAFG00000014822	-	92	75.510	Gambusia_affinis
ENSACLG00000000546	-	62	89.623	ENSHBUG00000002121	-	97	90.476	Haplochromis_burtoni
ENSACLG00000000546	-	58	73.737	ENSLBEG00000011597	-	78	73.737	Labrus_bergylta
ENSACLG00000000546	-	59	71.429	ENSMAMG00000015777	-	96	71.429	Mastacembelus_armatus
ENSACLG00000000546	-	100	98.824	ENSMZEG00005025953	-	100	98.824	Maylandia_zebra
ENSACLG00000000546	-	68	90.435	ENSMZEG00005002235	-	91	97.030	Maylandia_zebra
ENSACLG00000000546	-	71	99.174	ENSMZEG00005000809	-	54	99.174	Maylandia_zebra
ENSACLG00000000546	-	62	89.623	ENSMZEG00005026525	-	97	90.476	Maylandia_zebra
ENSACLG00000000546	-	69	66.667	ENSMMOG00000017364	-	69	76.531	Mola_mola
ENSACLG00000000546	-	54	95.652	ENSNBRG00000004074	-	86	95.652	Neolamprologus_brichardi
ENSACLG00000000546	-	90	57.831	ENSONIG00000017910	-	54	94.318	Oreochromis_niloticus
ENSACLG00000000546	-	54	58.065	ENSONIG00000021108	-	51	58.065	Oreochromis_niloticus
ENSACLG00000000546	-	59	74.257	ENSONIG00000001662	-	54	74.257	Oreochromis_niloticus
ENSACLG00000000546	-	55	65.591	ENSPMGG00000013885	-	98	64.078	Periophthalmus_magnuspinnatus
ENSACLG00000000546	-	59	76.000	ENSPMEG00000017983	-	96	76.000	Poecilia_mexicana
ENSACLG00000000546	-	58	76.768	ENSPREG00000005736	-	91	76.768	Poecilia_reticulata
ENSACLG00000000546	-	62	89.623	ENSPNYG00000024097	-	97	90.476	Pundamilia_nyererei
ENSACLG00000000546	-	54	34.783	ENSRNOG00000021748	Las1l	59	55.263	Rattus_norvegicus
ENSACLG00000000546	-	58	75.758	ENSSMAG00000001529	-	73	75.758	Scophthalmus_maximus
ENSACLG00000000546	-	61	74.757	ENSSDUG00000013831	-	79	74.757	Seriola_dumerili
ENSACLG00000000546	-	61	73.786	ENSSLDG00000001558	-	79	73.786	Seriola_lalandi_dorsalis
ENSACLG00000000546	-	61	75.728	ENSTRUG00000020641	-	73	77.778	Takifugu_rubripes
ENSACLG00000000546	-	57	78.351	ENSTNIG00000003282	-	52	74.528	Tetraodon_nigroviridis
ENSACLG00000000546	-	62	68.571	ENSXCOG00000000961	-	81	69.231	Xiphophorus_couchianus
ENSACLG00000000546	-	58	74.490	ENSXMAG00000023987	-	92	74.490	Xiphophorus_maculatus