EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000000779 (Gene tree)
Gene ID: 113008231
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 15909 bases
Position: chr2:34655514-34671422
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000001101	RRM_1	PF00076.22	1.4e-24	1	1
ENSACLP00000001068	RRM_1	PF00076.22	1.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000001096	-	2375	-	ENSACLP00000001068	528 (aa)	-	-
ENSACLT00000001129	-	2315	-	ENSACLP00000001101	508 (aa)	-	-

Gene Model

Click here to download ENSACLG00000000779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000000779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000000779	cstf2	93	60.377	ENSG00000101811	CSTF2	81	93.407	Homo_sapiens
ENSACLG00000000779	cstf2	93	91.296	ENSAPOG00000005630	cstf2	100	90.058	Acanthochromis_polyacanthus
ENSACLG00000000779	cstf2	93	58.814	ENSAMEG00000002082	CSTF2	63	82.645	Ailuropoda_melanoleuca
ENSACLG00000000779	cstf2	93	89.263	ENSACIG00000012852	cstf2	100	89.879	Amphilophus_citrinellus
ENSACLG00000000779	cstf2	96	89.453	ENSAOCG00000020905	cstf2	100	88.672	Amphiprion_ocellaris
ENSACLG00000000779	cstf2	96	89.648	ENSAPEG00000006526	cstf2	100	88.867	Amphiprion_percula
ENSACLG00000000779	cstf2	96	89.515	ENSATEG00000018186	cstf2	100	89.237	Anabas_testudineus
ENSACLG00000000779	cstf2	90	58.824	ENSAPLG00000007255	CSTF2	82	83.190	Anas_platyrhynchos
ENSACLG00000000779	cstf2	92	78.229	ENSANAG00000022342	CSTF2	99	58.478	Aotus_nancymaae
ENSACLG00000000779	cstf2	86	88.646	ENSAMXG00000021477	cstf2	96	100.000	Astyanax_mexicanus
ENSACLG00000000779	cstf2	93	61.140	ENSBTAG00000003547	CSTF2	65	82.645	Bos_taurus
ENSACLG00000000779	cstf2	93	62.651	ENSCJAG00000004422	CSTF2	52	82.645	Callithrix_jacchus
ENSACLG00000000779	cstf2	93	61.063	ENSCAFG00000017551	CSTF2	80	65.721	Canis_familiaris
ENSACLG00000000779	cstf2	93	78.229	ENSCAFG00020007619	CSTF2	80	65.721	Canis_lupus_dingo
ENSACLG00000000779	cstf2	93	61.313	ENSCHIG00000016994	CSTF2	65	82.645	Capra_hircus
ENSACLG00000000779	cstf2	94	60.714	ENSCPOG00000015255	CSTF2	84	93.464	Cavia_porcellus
ENSACLG00000000779	cstf2	93	62.007	ENSCCAG00000032975	CSTF2	99	58.478	Cebus_capucinus
ENSACLG00000000779	cstf2	93	62.186	ENSCATG00000022835	CSTF2	99	60.963	Cercocebus_atys
ENSACLG00000000779	cstf2	93	60.959	ENSCLAG00000001904	CSTF2	85	91.667	Chinchilla_lanigera
ENSACLG00000000779	cstf2	94	68.160	ENSCPBG00000014293	CSTF2	90	69.065	Chrysemys_picta_bellii
ENSACLG00000000779	cstf2	93	62.186	ENSCANG00000030612	CSTF2	99	60.963	Colobus_angolensis_palliatus
ENSACLG00000000779	cstf2	93	59.240	ENSCGRG00001023023	Cstf2	66	83.333	Cricetulus_griseus_chok1gshd
ENSACLG00000000779	cstf2	93	61.566	ENSCGRG00000003897	Cstf2	86	82.917	Cricetulus_griseus_crigri
ENSACLG00000000779	cstf2	93	87.764	ENSCVAG00000005731	cstf2	100	87.524	Cyprinodon_variegatus
ENSACLG00000000779	cstf2	74	100.000	ENSDARG00000090788	cstf2	99	89.744	Danio_rerio
ENSACLG00000000779	cstf2	93	60.653	ENSDORG00000007195	Cstf2	83	94.040	Dipodomys_ordii
ENSACLG00000000779	cstf2	73	80.000	ENSETEG00000004931	CSTF2	50	82.427	Echinops_telfairi
ENSACLG00000000779	cstf2	85	56.250	ENSFALG00000003859	CSTF2	84	80.000	Ficedula_albicollis
ENSACLG00000000779	cstf2	93	76.842	ENSFDAG00000002416	CSTF2	66	83.058	Fukomys_damarensis
ENSACLG00000000779	cstf2	98	85.768	ENSFHEG00000017065	cstf2	98	85.955	Fundulus_heteroclitus
ENSACLG00000000779	cstf2	92	76.471	ENSGMOG00000005145	cstf2	99	75.420	Gadus_morhua
ENSACLG00000000779	cstf2	94	61.272	ENSGALG00000006760	CSTF2	99	61.458	Gallus_gallus
ENSACLG00000000779	cstf2	93	85.595	ENSGAFG00000020027	cstf2	100	86.172	Gambusia_affinis
ENSACLG00000000779	cstf2	93	80.077	ENSGACG00000017326	cstf2	98	81.323	Gasterosteus_aculeatus
ENSACLG00000000779	cstf2	94	67.523	ENSGAGG00000006037	CSTF2	92	68.409	Gopherus_agassizii
ENSACLG00000000779	cstf2	93	62.366	ENSGGOG00000022267	CSTF2	99	60.963	Gorilla_gorilla
ENSACLG00000000779	cstf2	100	99.248	ENSHBUG00000016183	cstf2	100	99.248	Haplochromis_burtoni
ENSACLG00000000779	cstf2	93	61.407	ENSHGLG00000000659	-	86	90.123	Heterocephalus_glaber_female
ENSACLG00000000779	cstf2	93	61.407	ENSHGLG00100001130	-	86	90.123	Heterocephalus_glaber_male
ENSACLG00000000779	cstf2	93	85.513	ENSHCOG00000005157	cstf2	97	85.294	Hippocampus_comes
ENSACLG00000000779	cstf2	93	60.659	ENSSTOG00000023445	CSTF2	85	91.667	Ictidomys_tridecemlineatus
ENSACLG00000000779	cstf2	93	60.959	ENSJJAG00000020507	Cstf2	85	91.667	Jaculus_jaculus
ENSACLG00000000779	cstf2	96	85.513	ENSKMAG00000001068	cstf2	100	85.915	Kryptolebias_marmoratus
ENSACLG00000000779	cstf2	66	92.405	ENSLBEG00000028720	cstf2	100	91.139	Labrus_bergylta
ENSACLG00000000779	cstf2	94	61.046	ENSLACG00000015927	CSTF2	99	58.874	Latimeria_chalumnae
ENSACLG00000000779	cstf2	97	85.075	ENSLOCG00000015300	cstf2	87	85.075	Lepisosteus_oculatus
ENSACLG00000000779	cstf2	93	62.186	ENSMFAG00000043888	CSTF2	99	60.963	Macaca_fascicularis
ENSACLG00000000779	cstf2	93	62.186	ENSMMUG00000013008	CSTF2	99	60.963	Macaca_mulatta
ENSACLG00000000779	cstf2	93	62.186	ENSMNEG00000041824	CSTF2	99	60.963	Macaca_nemestrina
ENSACLG00000000779	cstf2	93	62.186	ENSMLEG00000036870	CSTF2	99	60.963	Mandrillus_leucophaeus
ENSACLG00000000779	cstf2	91	90.871	ENSMAMG00000020364	cstf2	96	89.419	Mastacembelus_armatus
ENSACLG00000000779	cstf2	96	100.000	ENSMZEG00005007200	cstf2	100	100.000	Maylandia_zebra
ENSACLG00000000779	cstf2	81	77.143	ENSMGAG00000004139	CSTF2	76	77.143	Meleagris_gallopavo
ENSACLG00000000779	cstf2	93	59.138	ENSMAUG00000000965	Cstf2	66	83.333	Mesocricetus_auratus
ENSACLG00000000779	cstf2	93	77.193	ENSMICG00000014121	CSTF2	62	83.058	Microcebus_murinus
ENSACLG00000000779	cstf2	93	60.381	ENSMOCG00000008081	Cstf2	66	82.917	Microtus_ochrogaster
ENSACLG00000000779	cstf2	96	76.531	ENSMMOG00000000538	cstf2	100	76.667	Mola_mola
ENSACLG00000000779	cstf2	94	61.296	ENSMODG00000011785	CSTF2	99	59.899	Monodelphis_domestica
ENSACLG00000000779	cstf2	92	79.336	MGP_CAROLIEiJ_G0033383	Cstf2	85	92.308	Mus_caroli
ENSACLG00000000779	cstf2	93	60.682	ENSMUSG00000031256	Cstf2	85	92.308	Mus_musculus
ENSACLG00000000779	cstf2	92	79.336	MGP_PahariEiJ_G0031923	Cstf2	66	83.884	Mus_pahari
ENSACLG00000000779	cstf2	93	77.061	MGP_SPRETEiJ_G0034548	Cstf2	85	92.308	Mus_spretus
ENSACLG00000000779	cstf2	93	78.229	ENSMPUG00000002339	CSTF2	61	83.058	Mustela_putorius_furo
ENSACLG00000000779	cstf2	90	79.457	ENSMLUG00000004598	CSTF2	60	82.377	Myotis_lucifugus
ENSACLG00000000779	cstf2	93	60.855	ENSNGAG00000021985	Cstf2	63	83.058	Nannospalax_galili
ENSACLG00000000779	cstf2	89	90.526	ENSNBRG00000021694	cstf2	100	90.526	Neolamprologus_brichardi
ENSACLG00000000779	cstf2	93	62.186	ENSNLEG00000007510	CSTF2	99	60.963	Nomascus_leucogenys
ENSACLG00000000779	cstf2	94	63.269	ENSMEUG00000011186	-	99	64.528	Notamacropus_eugenii
ENSACLG00000000779	cstf2	94	62.478	ENSMEUG00000007875	-	99	62.745	Notamacropus_eugenii
ENSACLG00000000779	cstf2	84	61.420	ENSMEUG00000014025	-	100	62.035	Notamacropus_eugenii
ENSACLG00000000779	cstf2	79	77.835	ENSOPRG00000003106	CSTF2	77	77.835	Ochotona_princeps
ENSACLG00000000779	cstf2	93	61.473	ENSODEG00000002059	CSTF2	99	58.763	Octodon_degus
ENSACLG00000000779	cstf2	94	96.364	ENSONIG00000002631	cstf2	86	96.364	Oreochromis_niloticus
ENSACLG00000000779	cstf2	82	82.692	ENSOANG00000004208	CSTF2	72	84.483	Ornithorhynchus_anatinus
ENSACLG00000000779	cstf2	93	60.413	ENSOCUG00000010468	CSTF2	81	59.565	Oryctolagus_cuniculus
ENSACLG00000000779	cstf2	93	86.526	ENSORLG00000001380	cstf2	100	84.818	Oryzias_latipes
ENSACLG00000000779	cstf2	93	86.105	ENSORLG00020021917	cstf2	100	84.818	Oryzias_latipes_hni
ENSACLG00000000779	cstf2	93	86.526	ENSORLG00015011996	cstf2	100	84.818	Oryzias_latipes_hsok
ENSACLG00000000779	cstf2	96	87.621	ENSOMEG00000015507	cstf2	100	86.694	Oryzias_melastigma
ENSACLG00000000779	cstf2	92	78.067	ENSOGAG00000011192	CSTF2	61	82.917	Otolemur_garnettii
ENSACLG00000000779	cstf2	93	61.313	ENSOARG00000001022	CSTF2	64	82.645	Ovis_aries
ENSACLG00000000779	cstf2	93	62.366	ENSPPAG00000031804	CSTF2	99	60.963	Pan_paniscus
ENSACLG00000000779	cstf2	93	62.366	ENSPTRG00000022090	CSTF2	99	60.963	Pan_troglodytes
ENSACLG00000000779	cstf2	92	78.229	ENSPANG00000002303	CSTF2	99	60.963	Papio_anubis
ENSACLG00000000779	cstf2	95	71.735	ENSPKIG00000005033	cstf2	93	73.374	Paramormyrops_kingsleyae
ENSACLG00000000779	cstf2	93	88.584	ENSPMGG00000006534	cstf2	100	87.424	Periophthalmus_magnuspinnatus
ENSACLG00000000779	cstf2	93	59.348	ENSPEMG00000019415	Cstf2	66	83.333	Peromyscus_maniculatus_bairdii
ENSACLG00000000779	cstf2	90	61.364	ENSPCIG00000002989	CSTF2	99	59.432	Phascolarctos_cinereus
ENSACLG00000000779	cstf2	93	83.845	ENSPLAG00000011176	cstf2	100	85.069	Poecilia_latipinna
ENSACLG00000000779	cstf2	93	84.221	ENSPMEG00000017743	cstf2	100	85.039	Poecilia_mexicana
ENSACLG00000000779	cstf2	63	89.759	ENSPREG00000011481	cstf2	100	78.533	Poecilia_reticulata
ENSACLG00000000779	cstf2	90	49.561	ENSPVAG00000008342	CSTF2	90	56.769	Pteropus_vampyrus
ENSACLG00000000779	cstf2	96	91.813	ENSPNYG00000010852	cstf2	100	94.565	Pundamilia_nyererei
ENSACLG00000000779	cstf2	93	60.862	ENSRNOG00000048025	Cstf2	87	83.884	Rattus_norvegicus
ENSACLG00000000779	cstf2	93	62.342	ENSRBIG00000030745	CSTF2	99	61.111	Rhinopithecus_bieti
ENSACLG00000000779	cstf2	93	62.186	ENSRROG00000045042	CSTF2	99	60.963	Rhinopithecus_roxellana
ENSACLG00000000779	cstf2	92	78.229	ENSSBOG00000021649	CSTF2	99	58.478	Saimiri_boliviensis_boliviensis
ENSACLG00000000779	cstf2	83	84.615	ENSSHAG00000003681	CSTF2	73	86.207	Sarcophilus_harrisii
ENSACLG00000000779	cstf2	93	74.566	ENSSFOG00015006348	cstf2	97	72.921	Scleropages_formosus
ENSACLG00000000779	cstf2	96	85.938	ENSSMAG00000013463	cstf2	100	87.891	Scophthalmus_maximus
ENSACLG00000000779	cstf2	94	61.702	ENSSPUG00000005288	-	52	84.362	Sphenodon_punctatus
ENSACLG00000000779	cstf2	93	62.173	ENSSSCG00000012486	CSTF2	52	82.645	Sus_scrofa
ENSACLG00000000779	cstf2	94	58.638	ENSTGUG00000002253	CSTF2	87	83.534	Taeniopygia_guttata
ENSACLG00000000779	cstf2	94	81.621	ENSTNIG00000016860	cstf2	99	82.400	Tetraodon_nigroviridis
ENSACLG00000000779	cstf2	93	78.229	ENSUAMG00000026605	CSTF2	94	65.707	Ursus_americanus
ENSACLG00000000779	cstf2	93	77.860	ENSUMAG00000012417	CSTF2	90	82.645	Ursus_maritimus
ENSACLG00000000779	cstf2	73	71.217	ENSVPAG00000006466	CSTF2	54	81.405	Vicugna_pacos
ENSACLG00000000779	cstf2	85	79.104	ENSXETG00000009642	cstf2	85	86.207	Xenopus_tropicalis
ENSACLG00000000779	cstf2	71	98.485	ENSXCOG00000016436	cstf2	100	94.118	Xiphophorus_couchianus
ENSACLG00000000779	cstf2	61	89.423	ENSXMAG00000013524	cstf2	100	80.863	Xiphophorus_maculatus