EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000000860 (Gene tree)
Gene ID: 113009794
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-19-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4392 bases
Position: chr17:31084618-31089009
Accession: 113009794
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000001224	MMR_HSR1	PF01926.23	0.00019	1	1
ENSACLP00000001219	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000001254	-	1354	-	ENSACLP00000001224	224 (aa)	XP_026004124	UPI000329F715
ENSACLT00000001249	-	690	-	ENSACLP00000001219	229 (aa)	-	-

Gene Model

Click here to download ENSACLG00000000860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000000860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000000860	-	74	36.471	ENSACLG00000018847	RAB7A	82	36.471
ENSACLG00000000860	-	83	47.027	ENSACLG00000019643	-	92	47.027
ENSACLG00000000860	-	88	45.408	ENSACLG00000013668	rab1ba	94	45.408
ENSACLG00000000860	-	78	45.355	ENSACLG00000021547	rab33a	65	45.355
ENSACLG00000000860	-	71	31.481	ENSACLG00000007804	si:ch73-116o1.2	77	31.481
ENSACLG00000000860	-	96	37.500	ENSACLG00000018262	rab25a	98	37.500
ENSACLG00000000860	-	75	50.299	ENSACLG00000023526	rab30	82	50.299
ENSACLG00000000860	-	75	45.087	ENSACLG00000009468	RAB39B	81	45.087
ENSACLG00000000860	-	76	42.353	ENSACLG00000026336	rab15	79	42.353
ENSACLG00000000860	-	68	37.255	ENSACLG00000002819	rab23	72	35.465
ENSACLG00000000860	-	53	35.833	ENSACLG00000027515	KRAS	85	31.902
ENSACLG00000000860	-	83	31.183	ENSACLG00000008646	rheb	96	31.183
ENSACLG00000000860	-	53	35.833	ENSACLG00000027677	KRAS	85	31.902
ENSACLG00000000860	-	74	36.471	ENSACLG00000024502	-	82	36.471
ENSACLG00000000860	-	96	39.815	ENSACLG00000010251	rab25b	97	39.815
ENSACLG00000000860	-	95	39.535	ENSACLG00000013505	-	96	39.535
ENSACLG00000000860	-	82	44.211	ENSACLG00000027006	zgc:101559	80	44.211
ENSACLG00000000860	-	72	39.506	ENSACLG00000025138	rab6ba	77	39.506
ENSACLG00000000860	-	75	46.243	ENSACLG00000022893	-	81	46.243
ENSACLG00000000860	-	79	38.636	ENSACLG00000019423	rab41	82	38.636
ENSACLG00000000860	-	71	42.138	ENSACLG00000001646	-	75	42.138
ENSACLG00000000860	-	74	36.471	ENSACLG00000024456	-	80	36.471
ENSACLG00000000860	-	72	42.593	ENSACLG00000002706	rab5c	89	36.967
ENSACLG00000000860	-	93	33.796	ENSACLG00000005093	rab34a	77	33.796
ENSACLG00000000860	-	66	42.484	ENSACLG00000010965	-	63	42.484
ENSACLG00000000860	-	86	46.667	ENSACLG00000007644	rab1ab	96	46.667
ENSACLG00000000860	-	77	40.462	ENSACLG00000007696	rab12	71	40.462
ENSACLG00000000860	-	96	39.815	ENSACLG00000001775	rab11a	97	39.815
ENSACLG00000000860	-	61	32.117	ENSACLG00000001181	hrasb	94	30.000
ENSACLG00000000860	-	77	39.080	ENSACLG00000026487	rab6bb	83	39.080
ENSACLG00000000860	-	75	35.673	ENSACLG00000004795	rab9b	77	35.673
ENSACLG00000000860	-	95	44.907	ENSACLG00000013734	-	98	44.907
ENSACLG00000000860	-	70	31.210	ENSACLG00000011249	rras	79	31.210
ENSACLG00000000860	-	96	39.352	ENSACLG00000010268	rab11al	97	39.352
ENSACLG00000000860	-	80	30.964	ENSACLG00000003898	rab32b	90	30.964
ENSACLG00000000860	-	71	30.178	ENSACLG00000011996	arl8a	87	30.178
ENSACLG00000000860	-	74	34.320	ENSACLG00000006647	rab9a	83	34.320
ENSACLG00000000860	-	79	42.632	ENSACLG00000005720	rab33ba	79	42.632
ENSACLG00000000860	-	78	43.750	ENSACLG00000015289	rab18b	85	43.750
ENSACLG00000000860	-	75	44.379	ENSACLG00000005420	rab11ba	77	44.379
ENSACLG00000000860	-	95	40.000	ENSACLG00000006329	-	96	40.000
ENSACLG00000000860	-	72	43.210	ENSACLG00000008615	-	73	43.210
ENSACLG00000000860	-	96	32.432	ENSACLG00000005733	rab34b	80	32.432
ENSACLG00000000860	-	69	39.375	ENSACLG00000008602	RAB29	96	39.375
ENSACLG00000000860	-	88	45.685	ENSACLG00000003326	-	95	45.685
ENSACLG00000000860	-	73	34.118	ENSACLG00000021109	si:dkey-13a21.4	80	34.118
ENSACLG00000000860	-	80	34.574	ENSACLG00000021470	rab22a	96	34.574
ENSACLG00000000860	-	75	45.562	ENSACLG00000007076	rab11bb	77	45.562
ENSACLG00000000860	-	75	42.012	ENSACLG00000011484	rab18a	82	42.012
ENSACLG00000000860	-	83	34.409	ENSACLG00000001218	RAB17	81	34.409
ENSACLG00000000860	-	93	37.321	ENSACLG00000018066	rab5aa	89	37.321
ENSACLG00000000860	-	79	44.920	ENSACLG00000007514	rab42a	86	44.920
ENSACLG00000000860	-	75	46.243	ENSACLG00000027590	-	81	46.243
ENSACLG00000000860	-	75	45.562	ENSACLG00000005446	-	77	45.562
ENSACLG00000000860	-	87	39.691	ENSACLG00000018852	-	86	39.691
ENSACLG00000000860	-	75	46.108	ENSACLG00000018721	si:dkey-16l2.16	90	43.684
ENSACLG00000000860	-	75	33.526	ENSACLG00000009103	si:cabz01085950.1	84	33.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000000860	-	72	86.957	ENSAOCG00000015948	-	76	88.050	Amphiprion_ocellaris
ENSACLG00000000860	-	100	78.571	ENSATEG00000012781	-	100	78.571	Anabas_testudineus
ENSACLG00000000860	-	99	73.543	ENSAMXG00000039737	RAB19	99	73.543	Astyanax_mexicanus
ENSACLG00000000860	-	89	64.039	ENSCPBG00000011914	RAB19	94	64.039	Chrysemys_picta_bellii
ENSACLG00000000860	-	100	79.018	ENSCSEG00000010402	-	100	79.018	Cynoglossus_semilaevis
ENSACLG00000000860	-	99	59.641	ENSFALG00000003709	RAB19	98	59.641	Ficedula_albicollis
ENSACLG00000000860	-	100	79.911	ENSGACG00000018847	-	99	79.911	Gasterosteus_aculeatus
ENSACLG00000000860	-	92	62.559	ENSGAGG00000013139	RAB19	96	62.559	Gopherus_agassizii
ENSACLG00000000860	-	99	66.816	ENSIPUG00000012509	-	99	66.816	Ictalurus_punctatus
ENSACLG00000000860	-	98	62.557	ENSIPUG00000016261	RAB19	96	62.273	Ictalurus_punctatus
ENSACLG00000000860	-	100	78.125	ENSKMAG00000012657	-	100	78.125	Kryptolebias_marmoratus
ENSACLG00000000860	-	83	99.465	ENSMZEG00005010813	-	90	99.465	Maylandia_zebra
ENSACLG00000000860	-	97	95.853	ENSONIG00000016851	-	100	95.853	Oreochromis_niloticus
ENSACLG00000000860	-	97	76.606	ENSPMGG00000007381	-	97	76.606	Periophthalmus_magnuspinnatus
ENSACLG00000000860	-	100	66.372	ENSPMGG00000009466	RAB19	100	66.372	Periophthalmus_magnuspinnatus
ENSACLG00000000860	-	99	100.000	ENSPNYG00000008498	-	99	100.000	Pundamilia_nyererei
ENSACLG00000000860	-	100	77.333	ENSTNIG00000018498	-	99	77.333	Tetraodon_nigroviridis
ENSACLG00000000860	-	94	69.524	ENSTNIG00000006650	RAB19	96	69.524	Tetraodon_nigroviridis