EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000000922 (Gene tree)
Gene ID: 113020382
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like protein 5C
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4057 bases
Position: chr4:7172607-7176663
Accession: 113020382
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000001314	MMR_HSR1	PF01926.23	7.5e-08	1	1
ENSACLP00000001337	MMR_HSR1	PF01926.23	9.5e-08	1	1
ENSACLP00000001354	MMR_HSR1	PF01926.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000001369	-	2635	-	ENSACLP00000001337	179 (aa)	XP_026020093	UPI000329D6A9
ENSACLT00000001345	-	2796	-	ENSACLP00000001314	164 (aa)	-	-
ENSACLT00000001386	-	2517	-	ENSACLP00000001354	186 (aa)	-	-

Gene Model

Click here to download ENSACLG00000000922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000000922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000000922	arl5c	100	47.273	ENSACLG00000022124	arf2b	98	46.328
ENSACLG00000000922	arl5c	98	39.521	ENSACLG00000020245	-	96	39.106
ENSACLG00000000922	arl5c	100	71.951	ENSACLG00000019945	arl5a	98	70.455
ENSACLG00000000922	arl5c	89	32.886	ENSACLG00000024227	arl13b	72	30.588
ENSACLG00000000922	arl5c	95	30.818	ENSACLG00000013597	arl8ba	82	30.128
ENSACLG00000000922	arl5c	76	32.061	ENSACLG00000011484	rab18a	64	32.061
ENSACLG00000000922	arl5c	98	38.860	ENSACLG00000002442	arfrp1	93	38.860
ENSACLG00000000922	arl5c	100	46.667	ENSACLG00000024971	arf3b	98	45.763
ENSACLG00000000922	arl5c	85	33.571	ENSACLG00000005011	-	71	33.571
ENSACLG00000000922	arl5c	89	41.176	ENSACLG00000014159	-	86	39.759
ENSACLG00000000922	arl5c	89	43.506	ENSACLG00000014218	arl4cb	82	43.125
ENSACLG00000000922	arl5c	92	41.212	ENSACLG00000021338	arl2	90	41.212
ENSACLG00000000922	arl5c	93	43.791	ENSACLG00000022869	-	95	43.791
ENSACLG00000000922	arl5c	90	40.132	ENSACLG00000026984	arl14	75	40.132
ENSACLG00000000922	arl5c	87	30.128	ENSACLG00000021872	arl8bb	82	30.128
ENSACLG00000000922	arl5c	86	32.624	ENSACLG00000013053	sar1ab	68	33.333
ENSACLG00000000922	arl5c	98	39.157	ENSACLG00000024656	ARL6	96	38.202
ENSACLG00000000922	arl5c	100	43.636	ENSACLG00000025604	-	100	42.778
ENSACLG00000000922	arl5c	99	44.785	ENSACLG00000008188	arl1	98	43.820
ENSACLG00000000922	arl5c	92	43.046	ENSACLG00000027139	arl3	87	41.509
ENSACLG00000000922	arl5c	92	42.384	ENSACLG00000012519	-	87	40.881
ENSACLG00000000922	arl5c	100	47.561	ENSACLG00000017387	-	98	46.591
ENSACLG00000000922	arl5c	100	73.780	ENSACLG00000000787	arl8	98	72.571
ENSACLG00000000922	arl5c	86	30.496	ENSACLG00000014649	sar1b	71	30.496
ENSACLG00000000922	arl5c	95	41.358	ENSACLG00000015415	-	79	41.718
ENSACLG00000000922	arl5c	89	43.791	ENSACLG00000016659	-	79	43.396
ENSACLG00000000922	arl5c	100	42.424	ENSACLG00000009822	-	91	42.690
ENSACLG00000000922	arl5c	100	44.848	ENSACLG00000005705	arf5	98	44.068
ENSACLG00000000922	arl5c	89	42.208	ENSACLG00000011811	-	83	40.719
ENSACLG00000000922	arl5c	95	32.692	ENSACLG00000011996	arl8a	81	32.692
ENSACLG00000000922	arl5c	100	48.780	ENSACLG00000004123	-	98	48.295
ENSACLG00000000922	arl5c	100	46.667	ENSACLG00000006072	-	98	45.763
ENSACLG00000000922	arl5c	92	38.411	ENSACLG00000008835	arl3l2	88	37.195
ENSACLG00000000922	arl5c	89	42.763	ENSACLG00000024991	arl4d	79	42.405
ENSACLG00000000922	arl5c	68	30.172	ENSACLG00000018721	si:dkey-16l2.16	55	30.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000000922	arl5c	100	89.944	ENSAPOG00000005821	arl5c	100	89.944	Acanthochromis_polyacanthus
ENSACLG00000000922	arl5c	92	97.561	ENSACIG00000008975	arl5c	91	97.561	Amphilophus_citrinellus
ENSACLG00000000922	arl5c	100	89.944	ENSAOCG00000010448	arl5c	100	89.944	Amphiprion_ocellaris
ENSACLG00000000922	arl5c	100	89.944	ENSAPEG00000002699	arl5c	100	89.944	Amphiprion_percula
ENSACLG00000000922	arl5c	100	87.805	ENSATEG00000000181	arl5c	100	87.151	Anabas_testudineus
ENSACLG00000000922	arl5c	100	84.358	ENSAMXG00000031771	arl5c	100	84.358	Astyanax_mexicanus
ENSACLG00000000922	arl5c	100	84.146	ENSCSEG00000009845	arl5c	100	83.240	Cynoglossus_semilaevis
ENSACLG00000000922	arl5c	100	91.463	ENSCVAG00000012706	arl5c	100	90.503	Cyprinodon_variegatus
ENSACLG00000000922	arl5c	100	84.358	ENSDARG00000035719	arl5c	100	84.358	Danio_rerio
ENSACLG00000000922	arl5c	100	87.805	ENSELUG00000016864	arl5c	100	87.151	Esox_lucius
ENSACLG00000000922	arl5c	100	91.463	ENSFHEG00000013677	arl5c	100	91.061	Fundulus_heteroclitus
ENSACLG00000000922	arl5c	100	92.073	ENSGAFG00000002547	arl5c	100	91.620	Gambusia_affinis
ENSACLG00000000922	arl5c	100	92.073	ENSGACG00000009321	arl5c	100	91.061	Gasterosteus_aculeatus
ENSACLG00000000922	arl5c	100	100.000	ENSHBUG00000007301	arl5c	100	100.000	Haplochromis_burtoni
ENSACLG00000000922	arl5c	100	83.537	ENSHCOG00000017576	-	100	82.682	Hippocampus_comes
ENSACLG00000000922	arl5c	100	84.916	ENSIPUG00000023232	arl5c	100	84.916	Ictalurus_punctatus
ENSACLG00000000922	arl5c	100	91.463	ENSKMAG00000011323	arl5c	100	90.503	Kryptolebias_marmoratus
ENSACLG00000000922	arl5c	100	89.944	ENSLBEG00000006177	arl5c	89	89.730	Labrus_bergylta
ENSACLG00000000922	arl5c	100	89.024	ENSMAMG00000022157	arl5c	100	88.268	Mastacembelus_armatus
ENSACLG00000000922	arl5c	100	100.000	ENSMZEG00005022925	arl5c	100	100.000	Maylandia_zebra
ENSACLG00000000922	arl5c	92	95.122	ENSMMOG00000020851	arl5c	96	95.122	Mola_mola
ENSACLG00000000922	arl5c	92	90.244	ENSMALG00000009306	arl5c	93	90.244	Monopterus_albus
ENSACLG00000000922	arl5c	100	99.441	ENSNBRG00000020245	arl5c	100	99.441	Neolamprologus_brichardi
ENSACLG00000000922	arl5c	100	99.441	ENSONIG00000000890	arl5c	100	99.444	Oreochromis_niloticus
ENSACLG00000000922	arl5c	100	84.756	ENSORLG00000002960	arl5c	100	84.756	Oryzias_latipes
ENSACLG00000000922	arl5c	100	84.756	ENSORLG00020010074	arl5c	100	84.756	Oryzias_latipes_hni
ENSACLG00000000922	arl5c	100	84.756	ENSORLG00015002752	arl5c	100	84.756	Oryzias_latipes_hsok
ENSACLG00000000922	arl5c	97	86.127	ENSOMEG00000021718	arl5c	98	86.127	Oryzias_melastigma
ENSACLG00000000922	arl5c	100	87.195	ENSPKIG00000021727	arl5c	100	86.592	Paramormyrops_kingsleyae
ENSACLG00000000922	arl5c	100	92.737	ENSPFOG00000007842	arl5c	99	92.737	Poecilia_formosa
ENSACLG00000000922	arl5c	100	92.683	ENSPLAG00000002394	arl5c	100	92.179	Poecilia_latipinna
ENSACLG00000000922	arl5c	91	93.252	ENSPMEG00000000631	arl5c	94	93.252	Poecilia_mexicana
ENSACLG00000000922	arl5c	100	93.296	ENSPREG00000008730	arl5c	100	93.296	Poecilia_reticulata
ENSACLG00000000922	arl5c	100	100.000	ENSPNYG00000012720	arl5c	100	100.000	Pundamilia_nyererei
ENSACLG00000000922	arl5c	100	83.799	ENSPNAG00000002310	arl5c	100	83.799	Pygocentrus_nattereri
ENSACLG00000000922	arl5c	100	85.976	ENSSFOG00015023529	arl5c	100	85.475	Scleropages_formosus
ENSACLG00000000922	arl5c	100	89.944	ENSSMAG00000010552	arl5c	100	89.944	Scophthalmus_maximus
ENSACLG00000000922	arl5c	100	87.709	ENSSDUG00000022640	arl5c	100	87.709	Seriola_dumerili
ENSACLG00000000922	arl5c	100	87.709	ENSSLDG00000000728	arl5c	100	87.709	Seriola_lalandi_dorsalis
ENSACLG00000000922	arl5c	100	89.634	ENSSPAG00000007687	arl5c	100	89.385	Stegastes_partitus
ENSACLG00000000922	arl5c	100	91.061	ENSTRUG00000022814	arl5c	100	91.061	Takifugu_rubripes
ENSACLG00000000922	arl5c	100	89.024	ENSTNIG00000003015	arl5c	100	88.333	Tetraodon_nigroviridis
ENSACLG00000000922	arl5c	100	93.293	ENSXCOG00000017380	arl5c	100	92.737	Xiphophorus_couchianus
ENSACLG00000000922	arl5c	100	92.683	ENSXMAG00000008447	arl5c	100	92.179	Xiphophorus_maculatus