EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000000995 (Gene tree)
Gene ID: 113019180
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 17873 bases
Position: chr3:29287622-29305494
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000001488	RRM_1	PF00076.22	4.5e-12	1	1
ENSACLP00000001435	RRM_1	PF00076.22	5.9e-12	1	1
ENSACLP00000001445	RRM_1	PF00076.22	8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000001523	-	810	-	ENSACLP00000001488	269 (aa)	-	-
ENSACLT00000001468	-	2540	-	ENSACLP00000001435	306 (aa)	-	UPI000648501D
ENSACLT00000001477	-	2212	-	ENSACLP00000001445	372 (aa)	-	-

Gene Model

Click here to download ENSACLG00000000995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000000995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000000995	-	91	46.758	ENSACLG00000011720	-	75	56.889
ENSACLG00000000995	-	80	50.917	ENSACLG00000007561	raly	65	53.211
ENSACLG00000000995	-	81	84.545	ENSACLG00000005707	-	86	82.609
ENSACLG00000000995	-	91	51.546	ENSACLG00000006949	-	74	59.641
ENSACLG00000000995	-	100	99.673	ENSACLG00000013636	-	96	96.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000000995	-	92	49.648	ENSG00000184672	RALYL	93	77.215	Homo_sapiens
ENSACLG00000000995	-	100	89.577	ENSAPOG00000006963	hnrnpc	100	87.948	Acanthochromis_polyacanthus
ENSACLG00000000995	-	96	95.318	ENSACIG00000000270	-	100	95.318	Amphilophus_citrinellus
ENSACLG00000000995	-	98	73.723	ENSACIG00000016568	-	89	79.268	Amphilophus_citrinellus
ENSACLG00000000995	-	100	89.251	ENSAOCG00000003896	-	100	87.622	Amphiprion_ocellaris
ENSACLG00000000995	-	82	85.520	ENSAOCG00000021616	-	78	82.609	Amphiprion_ocellaris
ENSACLG00000000995	-	100	89.251	ENSAPEG00000001489	-	100	87.622	Amphiprion_percula
ENSACLG00000000995	-	81	86.364	ENSAPEG00000019962	-	81	83.399	Amphiprion_percula
ENSACLG00000000995	-	83	85.650	ENSATEG00000018006	-	81	85.650	Anabas_testudineus
ENSACLG00000000995	-	92	92.606	ENSATEG00000011734	-	100	88.673	Anabas_testudineus
ENSACLG00000000995	-	79	53.982	ENSAPLG00000015574	RALYL	76	54.867	Anas_platyrhynchos
ENSACLG00000000995	-	79	53.097	ENSACAG00000028464	RALYL	74	54.348	Anolis_carolinensis
ENSACLG00000000995	-	92	49.296	ENSANAG00000023383	RALYL	74	59.070	Aotus_nancymaae
ENSACLG00000000995	-	72	77.949	ENSAMXG00000042946	hnrnpc	99	77.551	Astyanax_mexicanus
ENSACLG00000000995	-	85	79.615	ENSAMXG00000034915	zgc:55733	86	77.510	Astyanax_mexicanus
ENSACLG00000000995	-	92	49.296	ENSCJAG00000000402	RALYL	74	59.535	Callithrix_jacchus
ENSACLG00000000995	-	79	54.222	ENSCPOG00000012314	RALYL	75	56.000	Cavia_porcellus
ENSACLG00000000995	-	92	50.000	ENSCCAG00000025003	RALYL	77	77.215	Cebus_capucinus
ENSACLG00000000995	-	92	49.648	ENSCATG00000042145	RALYL	74	59.070	Cercocebus_atys
ENSACLG00000000995	-	79	54.222	ENSCLAG00000005228	RALYL	75	56.000	Chinchilla_lanigera
ENSACLG00000000995	-	79	52.655	ENSCHOG00000013228	RALYL	75	52.212	Choloepus_hoffmanni
ENSACLG00000000995	-	92	49.648	ENSCANG00000039144	RALYL	74	59.070	Colobus_angolensis_palliatus
ENSACLG00000000995	-	79	53.982	ENSCGRG00001009241	Ralyl	75	56.195	Cricetulus_griseus_chok1gshd
ENSACLG00000000995	-	98	69.716	ENSCSEG00000021349	-	94	68.581	Cynoglossus_semilaevis
ENSACLG00000000995	-	82	74.888	ENSCSEG00000019769	-	74	77.578	Cynoglossus_semilaevis
ENSACLG00000000995	-	82	82.745	ENSCVAG00000016981	-	87	74.737	Cyprinodon_variegatus
ENSACLG00000000995	-	96	73.311	ENSCVAG00000002797	-	91	74.815	Cyprinodon_variegatus
ENSACLG00000000995	-	91	79.928	ENSDARG00000103845	zgc:55733	90	80.723	Danio_rerio
ENSACLG00000000995	-	82	79.821	ENSDARG00000053810	hnrnpc	78	79.365	Danio_rerio
ENSACLG00000000995	-	79	54.425	ENSDORG00000003721	Ralyl	75	56.195	Dipodomys_ordii
ENSACLG00000000995	-	60	56.322	ENSETEG00000014028	RALYL	83	59.509	Echinops_telfairi
ENSACLG00000000995	-	91	43.816	ENSEBUG00000006049	RALYL	74	49.289	Eptatretus_burgeri
ENSACLG00000000995	-	80	47.297	ENSEBUG00000012363	hnrnpc	66	45.536	Eptatretus_burgeri
ENSACLG00000000995	-	79	54.425	ENSEEUG00000007202	RALYL	76	55.459	Erinaceus_europaeus
ENSACLG00000000995	-	81	84.475	ENSELUG00000007714	-	88	82.625	Esox_lucius
ENSACLG00000000995	-	81	82.805	ENSELUG00000004132	-	87	78.295	Esox_lucius
ENSACLG00000000995	-	79	57.209	ENSFALG00000008647	RALYL	97	58.333	Ficedula_albicollis
ENSACLG00000000995	-	92	87.324	ENSFHEG00000003605	-	93	87.324	Fundulus_heteroclitus
ENSACLG00000000995	-	83	78.151	ENSFHEG00000007278	-	98	66.563	Fundulus_heteroclitus
ENSACLG00000000995	-	79	57.674	ENSGALG00000036938	RALYL	75	54.867	Gallus_gallus
ENSACLG00000000995	-	100	84.039	ENSGAFG00000020486	-	100	85.342	Gambusia_affinis
ENSACLG00000000995	-	82	84.545	ENSGAFG00000020992	-	78	84.545	Gambusia_affinis
ENSACLG00000000995	-	83	71.491	ENSGACG00000018932	-	88	72.973	Gasterosteus_aculeatus
ENSACLG00000000995	-	86	78.067	ENSGACG00000017772	-	96	78.968	Gasterosteus_aculeatus
ENSACLG00000000995	-	92	49.648	ENSGGOG00000000841	RALYL	74	59.070	Gorilla_gorilla
ENSACLG00000000995	-	82	83.929	ENSHBUG00000010527	-	79	82.353	Haplochromis_burtoni
ENSACLG00000000995	-	100	99.673	ENSHBUG00000018342	-	100	99.673	Haplochromis_burtoni
ENSACLG00000000995	-	79	53.778	ENSHGLG00000004866	RALYL	75	55.556	Heterocephalus_glaber_female
ENSACLG00000000995	-	79	53.778	ENSHGLG00100017480	RALYL	75	55.556	Heterocephalus_glaber_male
ENSACLG00000000995	-	84	76.753	ENSHCOG00000012333	hnrnpc	86	75.094	Hippocampus_comes
ENSACLG00000000995	-	86	78.788	ENSIPUG00000008666	zgc:55733	94	83.028	Ictalurus_punctatus
ENSACLG00000000995	-	92	77.510	ENSIPUG00000011271	hnrnpc	98	79.913	Ictalurus_punctatus
ENSACLG00000000995	-	79	53.982	ENSSTOG00000012583	RALYL	76	55.752	Ictidomys_tridecemlineatus
ENSACLG00000000995	-	92	89.324	ENSKMAG00000011170	-	91	87.633	Kryptolebias_marmoratus
ENSACLG00000000995	-	81	84.091	ENSKMAG00000018265	-	78	79.528	Kryptolebias_marmoratus
ENSACLG00000000995	-	88	85.556	ENSLBEG00000006979	-	99	79.181	Labrus_bergylta
ENSACLG00000000995	-	95	75.241	ENSLBEG00000024418	-	99	77.152	Labrus_bergylta
ENSACLG00000000995	-	81	83.182	ENSLBEG00000006193	-	79	79.842	Labrus_bergylta
ENSACLG00000000995	-	85	70.849	ENSLOCG00000002560	hnrnpc	88	70.817	Lepisosteus_oculatus
ENSACLG00000000995	-	92	49.648	ENSMNEG00000033288	RALYL	74	59.070	Macaca_nemestrina
ENSACLG00000000995	-	92	49.648	ENSMLEG00000038284	RALYL	74	59.070	Mandrillus_leucophaeus
ENSACLG00000000995	-	94	76.426	ENSMAMG00000008033	-	88	81.569	Mastacembelus_armatus
ENSACLG00000000995	-	92	90.845	ENSMAMG00000012236	-	92	90.493	Mastacembelus_armatus
ENSACLG00000000995	-	81	84.545	ENSMZEG00005024249	-	80	82.609	Maylandia_zebra
ENSACLG00000000995	-	100	100.000	ENSMZEG00005020460	-	100	100.000	Maylandia_zebra
ENSACLG00000000995	-	79	53.982	ENSMAUG00000015149	Ralyl	75	56.195	Mesocricetus_auratus
ENSACLG00000000995	-	81	56.881	ENSMICG00000005558	RALYL	80	77.215	Microcebus_murinus
ENSACLG00000000995	-	79	53.982	ENSMOCG00000017371	Ralyl	75	56.195	Microtus_ochrogaster
ENSACLG00000000995	-	97	74.330	ENSMMOG00000019520	-	80	87.440	Mola_mola
ENSACLG00000000995	-	83	92.941	ENSMMOG00000021465	-	88	92.800	Mola_mola
ENSACLG00000000995	-	96	81.633	ENSMALG00000007520	-	98	80.000	Monopterus_albus
ENSACLG00000000995	-	85	82.890	ENSMALG00000014623	-	79	82.540	Monopterus_albus
ENSACLG00000000995	-	79	53.540	ENSMUSG00000039717	Ralyl	93	75.949	Mus_musculus
ENSACLG00000000995	-	79	55.310	ENSMPUG00000010724	RALYL	75	54.867	Mustela_putorius_furo
ENSACLG00000000995	-	79	53.982	ENSNGAG00000013375	Ralyl	75	56.195	Nannospalax_galili
ENSACLG00000000995	-	99	73.646	ENSNBRG00000015676	-	95	68.027	Neolamprologus_brichardi
ENSACLG00000000995	-	100	97.786	ENSNBRG00000004912	-	99	98.322	Neolamprologus_brichardi
ENSACLG00000000995	-	92	49.648	ENSNLEG00000002702	RALYL	71	59.070	Nomascus_leucogenys
ENSACLG00000000995	-	67	49.741	ENSOPRG00000013650	-	98	49.223	Ochotona_princeps
ENSACLG00000000995	-	92	46.309	ENSODEG00000001012	RALYL	75	55.556	Octodon_degus
ENSACLG00000000995	-	82	83.929	ENSONIG00000018350	-	79	82.353	Oreochromis_niloticus
ENSACLG00000000995	-	99	96.463	ENSONIG00000007859	-	100	96.463	Oreochromis_niloticus
ENSACLG00000000995	-	81	81.938	ENSORLG00000003144	-	78	80.460	Oryzias_latipes
ENSACLG00000000995	-	100	76.299	ENSORLG00000009999	-	100	75.325	Oryzias_latipes
ENSACLG00000000995	-	100	75.974	ENSORLG00020018228	hnrnpc	100	75.000	Oryzias_latipes_hni
ENSACLG00000000995	-	81	81.938	ENSORLG00015009460	-	78	80.460	Oryzias_latipes_hsok
ENSACLG00000000995	-	100	76.299	ENSORLG00015019755	-	100	75.325	Oryzias_latipes_hsok
ENSACLG00000000995	-	81	85.909	ENSOMEG00000022665	-	79	83.071	Oryzias_melastigma
ENSACLG00000000995	-	100	76.052	ENSOMEG00000020488	-	100	75.405	Oryzias_melastigma
ENSACLG00000000995	-	92	49.648	ENSPPAG00000038705	RALYL	74	59.070	Pan_paniscus
ENSACLG00000000995	-	81	57.078	ENSPPRG00000018612	RALYL	74	58.796	Panthera_pardus
ENSACLG00000000995	-	81	57.078	ENSPTIG00000020331	RALYL	74	58.796	Panthera_tigris_altaica
ENSACLG00000000995	-	92	49.648	ENSPTRG00000020381	RALYL	74	59.070	Pan_troglodytes
ENSACLG00000000995	-	92	49.648	ENSPANG00000029305	RALYL	74	59.070	Papio_anubis
ENSACLG00000000995	-	91	79.791	ENSPKIG00000008592	-	87	80.797	Paramormyrops_kingsleyae
ENSACLG00000000995	-	92	77.778	ENSPKIG00000022837	-	86	82.182	Paramormyrops_kingsleyae
ENSACLG00000000995	-	79	53.982	ENSPSIG00000011135	RALYL	74	54.783	Pelodiscus_sinensis
ENSACLG00000000995	-	99	59.779	ENSPMGG00000017774	-	91	66.814	Periophthalmus_magnuspinnatus
ENSACLG00000000995	-	82	84.545	ENSPMGG00000013144	-	82	84.545	Periophthalmus_magnuspinnatus
ENSACLG00000000995	-	79	53.982	ENSPEMG00000016447	Ralyl	75	56.195	Peromyscus_maniculatus_bairdii
ENSACLG00000000995	-	79	52.838	ENSPMAG00000002407	RALYL	97	52.838	Petromyzon_marinus
ENSACLG00000000995	-	100	86.364	ENSPFOG00000001583	-	100	87.013	Poecilia_formosa
ENSACLG00000000995	-	81	83.562	ENSPFOG00000002643	-	80	79.377	Poecilia_formosa
ENSACLG00000000995	-	81	83.562	ENSPLAG00000000061	-	86	75.089	Poecilia_latipinna
ENSACLG00000000995	-	100	85.342	ENSPLAG00000015305	-	100	85.993	Poecilia_latipinna
ENSACLG00000000995	-	100	85.993	ENSPMEG00000004802	-	100	86.645	Poecilia_mexicana
ENSACLG00000000995	-	81	83.562	ENSPMEG00000016524	-	78	80.237	Poecilia_mexicana
ENSACLG00000000995	-	92	88.380	ENSPREG00000007928	-	93	88.380	Poecilia_reticulata
ENSACLG00000000995	-	94	73.462	ENSPREG00000001852	-	84	80.237	Poecilia_reticulata
ENSACLG00000000995	-	72	45.946	ENSPPYG00000018710	-	67	47.115	Pongo_abelii
ENSACLG00000000995	-	79	52.889	ENSPVAG00000010821	RALYL	78	52.361	Pteropus_vampyrus
ENSACLG00000000995	-	81	85.388	ENSPNYG00000003747	-	85	82.353	Pundamilia_nyererei
ENSACLG00000000995	-	91	96.029	ENSPNYG00000020293	-	86	98.800	Pundamilia_nyererei
ENSACLG00000000995	-	81	83.333	ENSPNAG00000019200	zgc:55733	96	70.690	Pygocentrus_nattereri
ENSACLG00000000995	-	81	82.727	ENSPNAG00000015686	hnrnpc	84	81.275	Pygocentrus_nattereri
ENSACLG00000000995	-	92	49.648	ENSRROG00000023925	RALYL	82	75.309	Rhinopithecus_roxellana
ENSACLG00000000995	-	81	84.475	ENSSFOG00015012015	-	83	84.475	Scleropages_formosus
ENSACLG00000000995	-	81	86.364	ENSSFOG00015012924	-	80	94.937	Scleropages_formosus
ENSACLG00000000995	-	81	84.862	ENSSMAG00000011147	-	79	84.862	Scophthalmus_maximus
ENSACLG00000000995	-	95	82.215	ENSSMAG00000013592	-	99	81.731	Scophthalmus_maximus
ENSACLG00000000995	-	100	89.577	ENSSDUG00000001723	-	100	88.274	Seriola_dumerili
ENSACLG00000000995	-	83	85.714	ENSSDUG00000006730	-	80	81.028	Seriola_dumerili
ENSACLG00000000995	-	83	85.714	ENSSLDG00000007474	-	87	81.028	Seriola_lalandi_dorsalis
ENSACLG00000000995	-	91	92.446	ENSSLDG00000007454	-	87	91.698	Seriola_lalandi_dorsalis
ENSACLG00000000995	-	83	85.202	ENSSPAG00000013996	-	79	81.818	Stegastes_partitus
ENSACLG00000000995	-	92	94.286	ENSSPAG00000023204	-	100	89.251	Stegastes_partitus
ENSACLG00000000995	-	79	53.982	ENSTGUG00000011689	RALYL	76	54.867	Taeniopygia_guttata
ENSACLG00000000995	-	82	87.273	ENSTRUG00000020158	-	82	84.800	Takifugu_rubripes
ENSACLG00000000995	-	83	82.308	ENSTNIG00000007427	-	83	79.608	Tetraodon_nigroviridis
ENSACLG00000000995	-	93	70.934	ENSTNIG00000000334	-	93	74.031	Tetraodon_nigroviridis
ENSACLG00000000995	-	79	47.556	ENSTBEG00000005551	RALYL	87	49.333	Tupaia_belangeri
ENSACLG00000000995	-	79	51.528	ENSTTRG00000015762	RALYL	74	52.778	Tursiops_truncatus
ENSACLG00000000995	-	79	53.271	ENSVPAG00000008501	RALYL	74	53.881	Vicugna_pacos
ENSACLG00000000995	-	86	81.887	ENSXCOG00000006552	-	81	81.673	Xiphophorus_couchianus
ENSACLG00000000995	-	57	87.730	ENSXCOG00000019434	-	71	87.425	Xiphophorus_couchianus
ENSACLG00000000995	-	100	84.365	ENSXMAG00000009333	-	100	85.016	Xiphophorus_maculatus
ENSACLG00000000995	-	81	82.648	ENSXMAG00000022849	-	82	79.842	Xiphophorus_maculatus