EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000001218 (Gene tree)
Gene ID: 113008207
Gene Symbol: RAB17
Alias: -
Full Name: RAB17%2C member RAS oncogene family
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 11214 bases
Position: chr16:28887326-28898539
Accession: 113008207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000001739	MMR_HSR1	PF01926.23	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000001777	RAB17-201	1263	-	ENSACLP00000001739	227 (aa)	XP_026001255	UPI000E408CE6

Gene Model

Click here to download ENSACLG00000001218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000001218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000001218	RAB17	51	30.328	ENSACLG00000024991	arl4d	58	30.328
ENSACLG00000001218	RAB17	79	36.264	ENSACLG00000027590	-	85	36.264
ENSACLG00000001218	RAB17	63	32.886	ENSACLG00000010965	-	62	32.886
ENSACLG00000001218	RAB17	72	37.349	ENSACLG00000009468	RAB39B	78	37.349
ENSACLG00000001218	RAB17	72	34.940	ENSACLG00000007514	rab42a	76	34.940
ENSACLG00000001218	RAB17	72	34.524	ENSACLG00000024502	-	81	34.524
ENSACLG00000001218	RAB17	74	43.195	ENSACLG00000005446	-	77	43.195
ENSACLG00000001218	RAB17	71	50.920	ENSACLG00000002706	rab5c	74	50.920
ENSACLG00000001218	RAB17	74	43.787	ENSACLG00000001775	rab11a	78	43.787
ENSACLG00000001218	RAB17	89	32.353	ENSACLG00000013668	rab1ba	99	32.353
ENSACLG00000001218	RAB17	70	47.273	ENSACLG00000018262	rab25a	78	47.273
ENSACLG00000001218	RAB17	65	38.255	ENSACLG00000009103	si:cabz01085950.1	74	38.255
ENSACLG00000001218	RAB17	71	31.288	ENSACLG00000002819	rab23	74	31.429
ENSACLG00000001218	RAB17	78	30.337	ENSACLG00000008646	rheb	96	30.337
ENSACLG00000001218	RAB17	75	41.279	ENSACLG00000006329	-	79	41.279
ENSACLG00000001218	RAB17	72	33.136	ENSACLG00000004019	dnajc27	62	33.136
ENSACLG00000001218	RAB17	71	39.506	ENSACLG00000026336	rab15	76	39.506
ENSACLG00000001218	RAB17	71	52.147	ENSACLG00000018066	rab5aa	75	52.147
ENSACLG00000001218	RAB17	70	40.994	ENSACLG00000026487	rab6bb	76	40.994
ENSACLG00000001218	RAB17	87	34.848	ENSACLG00000019423	rab41	92	34.848
ENSACLG00000001218	RAB17	79	36.264	ENSACLG00000022893	-	85	36.264
ENSACLG00000001218	RAB17	82	43.850	ENSACLG00000010251	rab25b	86	43.850
ENSACLG00000001218	RAB17	75	40.698	ENSACLG00000013505	-	79	40.698
ENSACLG00000001218	RAB17	73	31.579	ENSACLG00000027006	zgc:101559	72	31.579
ENSACLG00000001218	RAB17	72	33.333	ENSACLG00000024456	-	80	33.333
ENSACLG00000001218	RAB17	71	30.909	ENSACLG00000005093	rab34a	62	30.909
ENSACLG00000001218	RAB17	67	32.278	ENSACLG00000008602	RAB29	95	32.278
ENSACLG00000001218	RAB17	74	38.012	ENSACLG00000007696	rab12	74	36.464
ENSACLG00000001218	RAB17	71	31.579	ENSACLG00000006647	rab9a	82	31.579
ENSACLG00000001218	RAB17	73	33.333	ENSACLG00000004795	rab9b	76	33.333
ENSACLG00000001218	RAB17	78	36.313	ENSACLG00000013734	-	84	36.313
ENSACLG00000001218	RAB17	71	50.920	ENSACLG00000008615	-	89	47.525
ENSACLG00000001218	RAB17	70	31.056	ENSACLG00000011249	rras	82	31.056
ENSACLG00000001218	RAB17	74	38.235	ENSACLG00000011484	rab18a	83	38.235
ENSACLG00000001218	RAB17	71	32.515	ENSACLG00000001646	-	77	32.515
ENSACLG00000001218	RAB17	79	42.778	ENSACLG00000010268	rab11al	83	42.778
ENSACLG00000001218	RAB17	70	31.214	ENSACLG00000005720	rab33ba	82	30.102
ENSACLG00000001218	RAB17	74	42.604	ENSACLG00000018852	-	76	42.604
ENSACLG00000001218	RAB17	73	38.323	ENSACLG00000015289	rab18b	81	38.323
ENSACLG00000001218	RAB17	74	43.195	ENSACLG00000005420	rab11ba	77	43.195
ENSACLG00000001218	RAB17	79	33.152	ENSACLG00000018847	RAB7A	86	33.152
ENSACLG00000001218	RAB17	89	34.804	ENSACLG00000003326	-	99	34.804
ENSACLG00000001218	RAB17	55	36.434	ENSACLG00000021109	si:dkey-13a21.4	62	36.434
ENSACLG00000001218	RAB17	81	34.409	ENSACLG00000000860	-	83	34.409
ENSACLG00000001218	RAB17	71	40.123	ENSACLG00000021470	rab22a	83	40.123
ENSACLG00000001218	RAB17	68	35.897	ENSACLG00000018721	si:dkey-16l2.16	74	35.897
ENSACLG00000001218	RAB17	89	35.437	ENSACLG00000007644	rab1ab	99	35.266
ENSACLG00000001218	RAB17	74	43.195	ENSACLG00000007076	rab11bb	77	43.195
ENSACLG00000001218	RAB17	71	37.423	ENSACLG00000019643	-	81	37.423
ENSACLG00000001218	RAB17	87	33.668	ENSACLG00000023526	rab30	95	33.668
ENSACLG00000001218	RAB17	70	40.000	ENSACLG00000025138	rab6ba	76	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000001218	RAB17	100	82.819	ENSACIG00000006949	RAB17	100	82.819	Amphilophus_citrinellus
ENSACLG00000001218	RAB17	100	77.533	ENSAOCG00000009167	-	100	77.533	Amphiprion_ocellaris
ENSACLG00000001218	RAB17	100	77.533	ENSAPEG00000002915	RAB17	100	77.533	Amphiprion_percula
ENSACLG00000001218	RAB17	86	49.746	ENSACAG00000004554	RAB17	88	49.746	Anolis_carolinensis
ENSACLG00000001218	RAB17	74	52.663	ENSFCAG00000012724	RAB17	79	52.663	Felis_catus
ENSACLG00000001218	RAB17	89	48.077	ENSFALG00000012783	RAB17	93	48.077	Ficedula_albicollis
ENSACLG00000001218	RAB17	74	55.621	ENSGALG00000003899	RAB17	78	55.621	Gallus_gallus
ENSACLG00000001218	RAB17	100	99.119	ENSHBUG00000001462	RAB17	100	99.119	Haplochromis_burtoni
ENSACLG00000001218	RAB17	96	66.063	ENSLBEG00000027691	RAB17	96	66.063	Labrus_bergylta
ENSACLG00000001218	RAB17	100	99.119	ENSMZEG00005013677	RAB17	100	99.119	Maylandia_zebra
ENSACLG00000001218	RAB17	90	50.000	ENSMGAG00000003135	RAB17	92	50.000	Meleagris_gallopavo
ENSACLG00000001218	RAB17	81	50.543	ENSMOCG00000006448	Rab17	85	50.543	Microtus_ochrogaster
ENSACLG00000001218	RAB17	100	76.211	ENSMMOG00000019258	RAB17	100	76.211	Mola_mola
ENSACLG00000001218	RAB17	96	46.789	ENSMODG00000008949	RAB17	96	46.789	Monodelphis_domestica
ENSACLG00000001218	RAB17	95	59.722	ENSMALG00000007905	RAB17	89	59.722	Monopterus_albus
ENSACLG00000001218	RAB17	91	94.175	ENSNBRG00000017793	RAB17	92	94.175	Neolamprologus_brichardi
ENSACLG00000001218	RAB17	69	55.769	ENSMEUG00000005002	RAB17	89	55.769	Notamacropus_eugenii
ENSACLG00000001218	RAB17	100	92.511	ENSONIG00000016776	RAB17	100	92.511	Oreochromis_niloticus
ENSACLG00000001218	RAB17	71	53.086	ENSPPRG00000003974	RAB17	76	53.086	Panthera_pardus
ENSACLG00000001218	RAB17	74	50.888	ENSPTIG00000014452	RAB17	79	50.888	Panthera_tigris_altaica
ENSACLG00000001218	RAB17	69	59.873	ENSPSIG00000016995	RAB17	66	59.873	Pelodiscus_sinensis
ENSACLG00000001218	RAB17	81	51.630	ENSPCIG00000021558	-	63	51.630	Phascolarctos_cinereus
ENSACLG00000001218	RAB17	100	99.119	ENSPNYG00000011135	RAB17	100	99.119	Pundamilia_nyererei
ENSACLG00000001218	RAB17	84	51.053	ENSSHAG00000009306	RAB17	88	51.053	Sarcophilus_harrisii
ENSACLG00000001218	RAB17	100	75.330	ENSSDUG00000006618	RAB17	100	75.330	Seriola_dumerili
ENSACLG00000001218	RAB17	100	75.771	ENSSLDG00000020918	RAB17	100	75.771	Seriola_lalandi_dorsalis
ENSACLG00000001218	RAB17	57	60.000	ENSSPUG00000015409	RAB17	60	60.000	Sphenodon_punctatus
ENSACLG00000001218	RAB17	100	73.128	ENSSPAG00000022624	-	100	73.128	Stegastes_partitus
ENSACLG00000001218	RAB17	74	55.952	ENSTGUG00000003786	RAB17	80	55.952	Taeniopygia_guttata