EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000001294 (Gene tree)
Gene ID: 113027766
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 15157 bases
Position: chr8:24636692-24651848
Accession: 113027766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000001972	AARP2CN	PF08142.12	9.8e-33	1	1
ENSACLP00000002003	AARP2CN	PF08142.12	1.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000002049	-	3573	-	ENSACLP00000002003	1190 (aa)	-	-
ENSACLT00000002016	-	5814	-	ENSACLP00000001972	1200 (aa)	XP_026033339	UPI000E426229

Gene Model

Click here to download ENSACLG00000001294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000001294's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000001294	bms1	99	61.330	ENSG00000165733	BMS1	87	68.571	Homo_sapiens
ENSACLG00000001294	bms1	88	82.375	ENSAPOG00000002296	bms1	100	81.887	Acanthochromis_polyacanthus
ENSACLG00000001294	bms1	99	62.229	ENSAMEG00000016834	BMS1	88	68.504	Ailuropoda_melanoleuca
ENSACLG00000001294	bms1	99	84.127	ENSACIG00000002588	bms1	100	82.864	Amphilophus_citrinellus
ENSACLG00000001294	bms1	100	83.019	ENSAOCG00000018088	bms1	100	82.923	Amphiprion_ocellaris
ENSACLG00000001294	bms1	100	83.237	ENSAPEG00000014673	bms1	100	83.141	Amphiprion_percula
ENSACLG00000001294	bms1	100	81.618	ENSATEG00000023465	bms1	100	81.863	Anabas_testudineus
ENSACLG00000001294	bms1	90	70.547	ENSAPLG00000003759	BMS1	86	70.775	Anas_platyrhynchos
ENSACLG00000001294	bms1	98	66.021	ENSACAG00000004537	-	87	69.614	Anolis_carolinensis
ENSACLG00000001294	bms1	96	67.943	ENSANAG00000023432	BMS1	88	67.954	Aotus_nancymaae
ENSACLG00000001294	bms1	93	76.645	ENSAMXG00000011236	bms1	97	69.951	Astyanax_mexicanus
ENSACLG00000001294	bms1	99	60.725	ENSBTAG00000012878	BMS1	87	69.495	Bos_taurus
ENSACLG00000001294	bms1	85	54.774	WBGene00022021	Y61A9LA.10	93	57.576	Caenorhabditis_elegans
ENSACLG00000001294	bms1	97	67.334	ENSCJAG00000021705	BMS1	88	67.446	Callithrix_jacchus
ENSACLG00000001294	bms1	99	61.868	ENSCAFG00000007114	BMS1	88	67.780	Canis_familiaris
ENSACLG00000001294	bms1	99	61.868	ENSCAFG00020025282	BMS1	88	67.780	Canis_lupus_dingo
ENSACLG00000001294	bms1	54	66.924	ENSCHIG00000023251	BMS1	87	68.952	Capra_hircus
ENSACLG00000001294	bms1	99	58.404	ENSCAPG00000008652	BMS1	93	63.953	Cavia_aperea
ENSACLG00000001294	bms1	99	61.335	ENSCPOG00000000502	BMS1	93	65.625	Cavia_porcellus
ENSACLG00000001294	bms1	89	47.714	ENSCATG00000008695	-	77	58.407	Cercocebus_atys
ENSACLG00000001294	bms1	99	61.931	ENSCATG00000030625	-	87	68.254	Cercocebus_atys
ENSACLG00000001294	bms1	99	61.681	ENSCLAG00000002446	BMS1	88	67.589	Chinchilla_lanigera
ENSACLG00000001294	bms1	97	68.000	ENSCSAG00000011118	BMS1	87	68.254	Chlorocebus_sabaeus
ENSACLG00000001294	bms1	99	61.051	ENSCHOG00000011055	BMS1	87	66.934	Choloepus_hoffmanni
ENSACLG00000001294	bms1	98	66.355	ENSCPBG00000025581	BMS1	86	69.293	Chrysemys_picta_bellii
ENSACLG00000001294	bms1	87	62.626	ENSCING00000003181	-	95	64.021	Ciona_intestinalis
ENSACLG00000001294	bms1	55	71.255	ENSCSAVG00000004113	-	88	53.103	Ciona_savignyi
ENSACLG00000001294	bms1	99	62.423	ENSCANG00000011609	BMS1	87	68.413	Colobus_angolensis_palliatus
ENSACLG00000001294	bms1	98	62.696	ENSCGRG00001019461	Bms1	93	67.188	Cricetulus_griseus_chok1gshd
ENSACLG00000001294	bms1	98	62.696	ENSCGRG00000009016	Bms1	93	67.188	Cricetulus_griseus_crigri
ENSACLG00000001294	bms1	100	75.160	ENSCSEG00000002469	bms1	100	75.100	Cynoglossus_semilaevis
ENSACLG00000001294	bms1	100	79.519	ENSCVAG00000008371	bms1	100	79.270	Cyprinodon_variegatus
ENSACLG00000001294	bms1	99	71.948	ENSDARG00000054154	bms1	99	72.891	Danio_rerio
ENSACLG00000001294	bms1	99	60.123	ENSDNOG00000015761	BMS1	87	67.255	Dasypus_novemcinctus
ENSACLG00000001294	bms1	95	68.750	ENSDORG00000002982	Bms1	87	68.590	Dipodomys_ordii
ENSACLG00000001294	bms1	88	61.501	FBgn0036686	CG7728	96	63.904	Drosophila_melanogaster
ENSACLG00000001294	bms1	84	67.857	ENSETEG00000009554	BMS1	77	67.857	Echinops_telfairi
ENSACLG00000001294	bms1	99	61.883	ENSEASG00005006894	BMS1	97	61.758	Equus_asinus_asinus
ENSACLG00000001294	bms1	99	62.231	ENSECAG00000001358	BMS1	97	61.216	Equus_caballus
ENSACLG00000001294	bms1	100	71.948	ENSELUG00000001756	bms1	99	72.869	Esox_lucius
ENSACLG00000001294	bms1	99	62.346	ENSFCAG00000011220	BMS1	87	68.269	Felis_catus
ENSACLG00000001294	bms1	99	64.646	ENSFALG00000006882	BMS1	85	69.231	Ficedula_albicollis
ENSACLG00000001294	bms1	99	66.111	ENSFDAG00000001422	BMS1	92	66.403	Fukomys_damarensis
ENSACLG00000001294	bms1	100	80.597	ENSFHEG00000003367	bms1	100	79.634	Fundulus_heteroclitus
ENSACLG00000001294	bms1	99	71.285	ENSGMOG00000000718	bms1	99	70.033	Gadus_morhua
ENSACLG00000001294	bms1	99	64.971	ENSGALG00000002624	BMS1	86	68.530	Gallus_gallus
ENSACLG00000001294	bms1	99	80.128	ENSGACG00000015334	bms1	89	80.128	Gasterosteus_aculeatus
ENSACLG00000001294	bms1	96	67.101	ENSGAGG00000003467	BMS1	93	68.211	Gopherus_agassizii
ENSACLG00000001294	bms1	100	99.583	ENSHBUG00000022628	bms1	100	99.583	Haplochromis_burtoni
ENSACLG00000001294	bms1	99	62.131	ENSHGLG00000000477	BMS1	88	67.949	Heterocephalus_glaber_female
ENSACLG00000001294	bms1	99	62.131	ENSHGLG00100002176	BMS1	88	67.949	Heterocephalus_glaber_male
ENSACLG00000001294	bms1	99	78.075	ENSHCOG00000017604	bms1	99	77.975	Hippocampus_comes
ENSACLG00000001294	bms1	97	82.303	ENSIPUG00000017855	bms1	99	70.730	Ictalurus_punctatus
ENSACLG00000001294	bms1	99	61.872	ENSSTOG00000015063	BMS1	88	67.773	Ictidomys_tridecemlineatus
ENSACLG00000001294	bms1	54	66.309	ENSJJAG00000017328	Bms1	93	66.339	Jaculus_jaculus
ENSACLG00000001294	bms1	65	76.312	ENSKMAG00000021982	bms1	97	75.416	Kryptolebias_marmoratus
ENSACLG00000001294	bms1	100	77.659	ENSLBEG00000028208	bms1	100	78.383	Labrus_bergylta
ENSACLG00000001294	bms1	54	57.207	ENSLACG00000001600	BMS1	87	65.988	Latimeria_chalumnae
ENSACLG00000001294	bms1	97	70.906	ENSLOCG00000012914	bms1	97	71.595	Lepisosteus_oculatus
ENSACLG00000001294	bms1	99	66.729	ENSLAFG00000006250	BMS1	87	67.641	Loxodonta_africana
ENSACLG00000001294	bms1	88	66.731	ENSMFAG00000037771	BMS1	96	67.723	Macaca_fascicularis
ENSACLG00000001294	bms1	87	62.338	ENSMMUG00000007426	-	85	62.863	Macaca_mulatta
ENSACLG00000001294	bms1	82	53.682	ENSMLEG00000029084	-	77	57.326	Mandrillus_leucophaeus
ENSACLG00000001294	bms1	100	80.791	ENSMAMG00000020855	bms1	100	79.487	Mastacembelus_armatus
ENSACLG00000001294	bms1	100	99.833	ENSMZEG00005005663	bms1	100	99.833	Maylandia_zebra
ENSACLG00000001294	bms1	90	69.502	ENSMGAG00000001170	BMS1	87	69.071	Meleagris_gallopavo
ENSACLG00000001294	bms1	98	62.539	ENSMAUG00000002195	Bms1	89	66.992	Mesocricetus_auratus
ENSACLG00000001294	bms1	99	66.309	ENSMICG00000009977	BMS1	88	67.391	Microcebus_murinus
ENSACLG00000001294	bms1	98	65.067	ENSMOCG00000002038	Bms1	87	67.308	Microtus_ochrogaster
ENSACLG00000001294	bms1	100	79.039	ENSMMOG00000000977	bms1	100	77.427	Mola_mola
ENSACLG00000001294	bms1	99	62.243	ENSMODG00000001177	BMS1	86	70.096	Monodelphis_domestica
ENSACLG00000001294	bms1	100	81.090	ENSMALG00000009680	bms1	100	80.929	Monopterus_albus
ENSACLG00000001294	bms1	72	76.962	MGP_CAROLIEiJ_G0028785	-	73	80.342	Mus_caroli
ENSACLG00000001294	bms1	98	60.951	ENSMUSG00000030138	Bms1	87	66.190	Mus_musculus
ENSACLG00000001294	bms1	93	66.145	MGP_PahariEiJ_G0022539	Bms1	92	67.194	Mus_pahari
ENSACLG00000001294	bms1	98	60.859	MGP_SPRETEiJ_G0029816	Bms1	87	66.469	Mus_spretus
ENSACLG00000001294	bms1	99	62.393	ENSMPUG00000017276	BMS1	88	67.319	Mustela_putorius_furo
ENSACLG00000001294	bms1	99	61.616	ENSMLUG00000003260	BMS1	87	67.836	Myotis_lucifugus
ENSACLG00000001294	bms1	99	56.924	ENSNGAG00000015258	Bms1	97	57.333	Nannospalax_galili
ENSACLG00000001294	bms1	99	60.634	ENSNLEG00000015791	BMS1	87	68.317	Nomascus_leucogenys
ENSACLG00000001294	bms1	85	77.833	ENSOPRG00000005195	BMS1	77	80.000	Ochotona_princeps
ENSACLG00000001294	bms1	99	65.981	ENSODEG00000005554	BMS1	93	66.342	Octodon_degus
ENSACLG00000001294	bms1	100	96.924	ENSONIG00000007227	bms1	100	96.924	Oreochromis_niloticus
ENSACLG00000001294	bms1	99	60.123	ENSOANG00000000662	-	87	67.147	Ornithorhynchus_anatinus
ENSACLG00000001294	bms1	95	68.910	ENSOCUG00000005354	BMS1	86	68.910	Oryctolagus_cuniculus
ENSACLG00000001294	bms1	99	79.083	ENSORLG00000014655	bms1	99	79.233	Oryzias_latipes
ENSACLG00000001294	bms1	99	75.410	ENSORLG00020016246	bms1	99	75.812	Oryzias_latipes_hni
ENSACLG00000001294	bms1	99	75.944	ENSORLG00015014183	bms1	99	76.365	Oryzias_latipes_hsok
ENSACLG00000001294	bms1	99	79.734	ENSOMEG00000015042	bms1	99	79.619	Oryzias_melastigma
ENSACLG00000001294	bms1	98	66.917	ENSOGAG00000006511	BMS1	86	68.262	Otolemur_garnettii
ENSACLG00000001294	bms1	99	60.015	ENSOARG00000003900	BMS1	87	68.400	Ovis_aries
ENSACLG00000001294	bms1	99	58.810	ENSPPAG00000027837	BMS1	87	68.102	Pan_paniscus
ENSACLG00000001294	bms1	99	62.048	ENSPPRG00000001311	BMS1	87	68.269	Panthera_pardus
ENSACLG00000001294	bms1	99	61.236	ENSPTIG00000009652	BMS1	87	67.976	Panthera_tigris_altaica
ENSACLG00000001294	bms1	99	61.562	ENSPTRG00000002441	BMS1	87	68.730	Pan_troglodytes
ENSACLG00000001294	bms1	97	75.879	ENSPKIG00000008165	bms1	90	77.476	Paramormyrops_kingsleyae
ENSACLG00000001294	bms1	95	67.296	ENSPSIG00000006481	BMS1	86	68.438	Pelodiscus_sinensis
ENSACLG00000001294	bms1	98	56.221	ENSPEMG00000022467	Bms1	87	66.996	Peromyscus_maniculatus_bairdii
ENSACLG00000001294	bms1	96	69.231	ENSPCIG00000001339	BMS1	85	74.648	Phascolarctos_cinereus
ENSACLG00000001294	bms1	97	81.350	ENSPFOG00000015180	bms1	99	77.374	Poecilia_formosa
ENSACLG00000001294	bms1	99	78.453	ENSPMEG00000023176	bms1	94	79.035	Poecilia_mexicana
ENSACLG00000001294	bms1	99	78.702	ENSPREG00000002695	bms1	99	78.642	Poecilia_reticulata
ENSACLG00000001294	bms1	58	56.637	ENSPPYG00000002836	-	79	68.359	Pongo_abelii
ENSACLG00000001294	bms1	72	76.190	ENSPCAG00000014528	BMS1	70	76.190	Procavia_capensis
ENSACLG00000001294	bms1	93	67.300	ENSPCOG00000023834	-	89	66.530	Propithecus_coquereli
ENSACLG00000001294	bms1	99	61.664	ENSPVAG00000000725	BMS1	88	67.788	Pteropus_vampyrus
ENSACLG00000001294	bms1	100	95.997	ENSPNYG00000018866	bms1	99	97.797	Pundamilia_nyererei
ENSACLG00000001294	bms1	54	76.324	ENSPNAG00000000676	bms1	97	71.002	Pygocentrus_nattereri
ENSACLG00000001294	bms1	80	60.795	ENSRNOG00000006576	Bms1	86	67.653	Rattus_norvegicus
ENSACLG00000001294	bms1	99	60.772	ENSRROG00000040101	BMS1	85	70.297	Rhinopithecus_roxellana
ENSACLG00000001294	bms1	80	45.508	YPL217C	-	73	55.301	Saccharomyces_cerevisiae
ENSACLG00000001294	bms1	99	61.544	ENSSBOG00000035778	BMS1	88	68.262	Saimiri_boliviensis_boliviensis
ENSACLG00000001294	bms1	99	64.955	ENSSHAG00000005062	BMS1	88	67.886	Sarcophilus_harrisii
ENSACLG00000001294	bms1	98	75.969	ENSSFOG00015022313	bms1	99	69.702	Scleropages_formosus
ENSACLG00000001294	bms1	100	78.629	ENSSMAG00000019966	bms1	100	78.952	Scophthalmus_maximus
ENSACLG00000001294	bms1	100	81.301	ENSSDUG00000016875	bms1	100	81.220	Seriola_dumerili
ENSACLG00000001294	bms1	100	80.744	ENSSLDG00000015199	bms1	100	81.634	Seriola_lalandi_dorsalis
ENSACLG00000001294	bms1	66	62.830	ENSSARG00000014407	BMS1	86	61.100	Sorex_araneus
ENSACLG00000001294	bms1	99	68.489	ENSSPUG00000014454	BMS1	86	68.710	Sphenodon_punctatus
ENSACLG00000001294	bms1	99	62.317	ENSSSCG00000010198	BMS1	87	68.209	Sus_scrofa
ENSACLG00000001294	bms1	95	69.887	ENSTGUG00000006302	-	85	69.231	Taeniopygia_guttata
ENSACLG00000001294	bms1	99	71.000	ENSTRUG00000008028	bms1	99	70.657	Takifugu_rubripes
ENSACLG00000001294	bms1	99	73.194	ENSTNIG00000006216	bms1	89	74.318	Tetraodon_nigroviridis
ENSACLG00000001294	bms1	65	71.333	ENSTBEG00000001673	-	63	70.707	Tupaia_belangeri
ENSACLG00000001294	bms1	99	61.681	ENSTTRG00000007983	BMS1	86	68.218	Tursiops_truncatus
ENSACLG00000001294	bms1	99	62.189	ENSUAMG00000023996	BMS1	88	68.452	Ursus_americanus
ENSACLG00000001294	bms1	99	62.034	ENSUMAG00000016523	BMS1	88	68.452	Ursus_maritimus
ENSACLG00000001294	bms1	82	71.789	ENSVPAG00000007477	BMS1	82	73.203	Vicugna_pacos
ENSACLG00000001294	bms1	99	67.985	ENSVVUG00000021305	BMS1	90	67.780	Vulpes_vulpes
ENSACLG00000001294	bms1	98	61.935	ENSXETG00000008158	bms1	99	62.069	Xenopus_tropicalis
ENSACLG00000001294	bms1	99	76.096	ENSXCOG00000000506	bms1	95	87.654	Xiphophorus_couchianus
ENSACLG00000001294	bms1	99	77.741	ENSXMAG00000014236	bms1	99	78.148	Xiphophorus_maculatus