EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000001926 (Gene tree)
Gene ID: 113016219
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 6521 bases
Position: chr23:3752070-3758590
Accession: ZDB-GENE-030131-698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000002880	RRM_1	PF00076.22	8.7e-14	1	1
ENSACLP00000002880	SAP	PF02037.27	4.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000002941	-	2361	-	ENSACLP00000002880	786 (aa)	-	-

Gene Model

Click here to download ENSACLG00000001926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000001926's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000001926	safb	55	37.124	ENSACLG00000002523	sltm	83	35.698

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000001926	safb	64	42.998	ENSG00000160633	SAFB	78	62.295	Homo_sapiens
ENSACLG00000001926	safb	100	79.042	ENSAPOG00000022508	safb	100	79.162	Acanthochromis_polyacanthus
ENSACLG00000001926	safb	65	42.484	ENSAMEG00000012254	SAFB	90	42.204	Ailuropoda_melanoleuca
ENSACLG00000001926	safb	100	84.994	ENSACIG00000006247	safb	100	85.912	Amphilophus_citrinellus
ENSACLG00000001926	safb	100	74.786	ENSAOCG00000006308	safb	99	78.382	Amphiprion_ocellaris
ENSACLG00000001926	safb	100	78.708	ENSAPEG00000023342	safb	100	78.947	Amphiprion_percula
ENSACLG00000001926	safb	100	81.862	ENSATEG00000004998	safb	100	81.504	Anabas_testudineus
ENSACLG00000001926	safb	58	45.387	ENSAPLG00000006355	-	96	50.062	Anas_platyrhynchos
ENSACLG00000001926	safb	50	58.145	ENSACAG00000016893	-	96	44.094	Anolis_carolinensis
ENSACLG00000001926	safb	64	44.816	ENSANAG00000028821	SAFB	95	41.928	Aotus_nancymaae
ENSACLG00000001926	safb	98	62.604	ENSAMXG00000018154	safb	100	63.103	Astyanax_mexicanus
ENSACLG00000001926	safb	95	44.054	ENSBTAG00000007875	SAFB	94	41.453	Bos_taurus
ENSACLG00000001926	safb	65	42.484	ENSCAFG00000018803	SAFB	78	42.538	Canis_familiaris
ENSACLG00000001926	safb	65	42.484	ENSCAFG00020018943	SAFB	90	42.303	Canis_lupus_dingo
ENSACLG00000001926	safb	95	43.964	ENSCHIG00000007262	SAFB	94	41.639	Capra_hircus
ENSACLG00000001926	safb	57	43.281	ENSTSYG00000001851	-	84	43.982	Carlito_syrichta
ENSACLG00000001926	safb	64	44.799	ENSCCAG00000020193	SAFB	95	42.954	Cebus_capucinus
ENSACLG00000001926	safb	64	42.998	ENSCATG00000029994	SAFB	95	41.812	Cercocebus_atys
ENSACLG00000001926	safb	64	42.998	ENSCSAG00000009949	SAFB	90	43.195	Chlorocebus_sabaeus
ENSACLG00000001926	safb	58	32.496	ENSCHOG00000003208	SAFB	63	41.711	Choloepus_hoffmanni
ENSACLG00000001926	safb	91	43.494	ENSCPBG00000010928	-	98	44.028	Chrysemys_picta_bellii
ENSACLG00000001926	safb	88	50.702	ENSCPBG00000010936	-	98	46.509	Chrysemys_picta_bellii
ENSACLG00000001926	safb	79	42.754	ENSCANG00000004774	-	93	43.534	Colobus_angolensis_palliatus
ENSACLG00000001926	safb	94	42.758	ENSCANG00000019754	-	93	42.644	Colobus_angolensis_palliatus
ENSACLG00000001926	safb	99	71.429	ENSCSEG00000019870	safb	100	71.429	Cynoglossus_semilaevis
ENSACLG00000001926	safb	100	68.136	ENSCVAG00000002226	safb	100	67.758	Cyprinodon_variegatus
ENSACLG00000001926	safb	96	60.740	ENSDARG00000020467	safb	98	61.040	Danio_rerio
ENSACLG00000001926	safb	64	42.997	ENSDNOG00000015746	SAFB	95	40.789	Dasypus_novemcinctus
ENSACLG00000001926	safb	62	43.960	ENSEASG00005023019	SAFB	95	42.967	Equus_asinus_asinus
ENSACLG00000001926	safb	99	63.244	ENSELUG00000022327	safb	99	63.341	Esox_lucius
ENSACLG00000001926	safb	65	42.484	ENSFCAG00000011835	SAFB	90	42.254	Felis_catus
ENSACLG00000001926	safb	63	43.771	ENSFALG00000013882	-	87	45.778	Ficedula_albicollis
ENSACLG00000001926	safb	51	56.098	ENSFDAG00000020306	SAFB	66	56.557	Fukomys_damarensis
ENSACLG00000001926	safb	100	71.178	ENSFHEG00000004219	safb	100	70.927	Fundulus_heteroclitus
ENSACLG00000001926	safb	100	65.868	ENSGMOG00000014280	safb	100	66.467	Gadus_morhua
ENSACLG00000001926	safb	99	43.165	ENSGALG00000013365	-	97	45.993	Gallus_gallus
ENSACLG00000001926	safb	100	68.154	ENSGAFG00000016162	safb	100	67.672	Gambusia_affinis
ENSACLG00000001926	safb	100	73.964	ENSGACG00000011385	safb	100	73.609	Gasterosteus_aculeatus
ENSACLG00000001926	safb	95	49.388	ENSGAGG00000008424	-	95	50.170	Gopherus_agassizii
ENSACLG00000001926	safb	69	50.498	ENSGAGG00000017702	-	90	53.177	Gopherus_agassizii
ENSACLG00000001926	safb	64	43.980	ENSGGOG00000015109	SAFB	95	42.182	Gorilla_gorilla
ENSACLG00000001926	safb	100	86.493	ENSHBUG00000009218	safb	100	86.989	Haplochromis_burtoni
ENSACLG00000001926	safb	51	55.285	ENSHGLG00100004228	SAFB	53	41.734	Heterocephalus_glaber_male
ENSACLG00000001926	safb	94	64.185	ENSHCOG00000001705	safb	99	65.000	Hippocampus_comes
ENSACLG00000001926	safb	99	63.321	ENSIPUG00000024869	safb2	99	63.496	Ictalurus_punctatus
ENSACLG00000001926	safb	100	74.641	ENSKMAG00000022308	safb	100	75.000	Kryptolebias_marmoratus
ENSACLG00000001926	safb	100	76.415	ENSLBEG00000006015	safb	100	76.061	Labrus_bergylta
ENSACLG00000001926	safb	64	45.875	ENSLACG00000018090	SAFB	98	50.441	Latimeria_chalumnae
ENSACLG00000001926	safb	98	61.467	ENSLOCG00000003613	safb	99	62.021	Lepisosteus_oculatus
ENSACLG00000001926	safb	95	43.415	ENSLAFG00000003840	SAFB	96	42.952	Loxodonta_africana
ENSACLG00000001926	safb	64	42.763	ENSMFAG00000003885	SAFB	95	41.812	Macaca_fascicularis
ENSACLG00000001926	safb	64	44.764	ENSMMUG00000017970	SAFB	95	43.463	Macaca_mulatta
ENSACLG00000001926	safb	64	42.256	ENSMNEG00000035637	SAFB	95	41.657	Macaca_nemestrina
ENSACLG00000001926	safb	95	42.348	ENSMLEG00000038637	SAFB	89	42.118	Mandrillus_leucophaeus
ENSACLG00000001926	safb	100	79.142	ENSMAMG00000003357	safb	91	78.665	Mastacembelus_armatus
ENSACLG00000001926	safb	100	99.873	ENSMZEG00005009120	safb	100	99.873	Maylandia_zebra
ENSACLG00000001926	safb	97	40.984	ENSMGAG00000001101	-	98	44.308	Meleagris_gallopavo
ENSACLG00000001926	safb	64	43.214	ENSMICG00000008739	-	89	44.025	Microcebus_murinus
ENSACLG00000001926	safb	85	38.680	ENSMICG00000046795	-	95	40.492	Microcebus_murinus
ENSACLG00000001926	safb	94	42.921	ENSMODG00000001236	SAFB	95	40.632	Monodelphis_domestica
ENSACLG00000001926	safb	100	77.712	ENSMALG00000020330	safb	100	77.594	Monopterus_albus
ENSACLG00000001926	safb	52	58.537	MGP_CAROLIEiJ_G0021780	Safb	63	59.016	Mus_caroli
ENSACLG00000001926	safb	52	59.350	ENSMUSG00000071054	Safb	70	59.836	Mus_musculus
ENSACLG00000001926	safb	51	58.537	MGP_PahariEiJ_G0020769	Safb	63	59.664	Mus_pahari
ENSACLG00000001926	safb	98	44.137	ENSMLUG00000001081	SAFB	95	41.814	Myotis_lucifugus
ENSACLG00000001926	safb	51	56.303	ENSNGAG00000019882	Safb	84	56.303	Nannospalax_galili
ENSACLG00000001926	safb	64	43.813	ENSNLEG00000013551	SAFB	94	43.077	Nomascus_leucogenys
ENSACLG00000001926	safb	58	40.794	ENSOPRG00000011561	-	97	40.520	Ochotona_princeps
ENSACLG00000001926	safb	100	92.446	ENSONIG00000002318	safb	100	92.446	Oreochromis_niloticus
ENSACLG00000001926	safb	86	39.051	ENSOCUG00000014628	SAFB	62	40.153	Oryctolagus_cuniculus
ENSACLG00000001926	safb	98	72.359	ENSORLG00000016989	safb	100	72.029	Oryzias_latipes
ENSACLG00000001926	safb	65	69.737	ENSORLG00020000404	safb	100	67.159	Oryzias_latipes_hni
ENSACLG00000001926	safb	98	73.219	ENSORLG00015010733	safb	100	72.804	Oryzias_latipes_hsok
ENSACLG00000001926	safb	100	72.356	ENSOMEG00000009066	safb	100	72.356	Oryzias_melastigma
ENSACLG00000001926	safb	62	44.444	ENSOGAG00000027769	SAFB	90	43.934	Otolemur_garnettii
ENSACLG00000001926	safb	81	37.685	ENSOARG00000007856	-	100	39.142	Ovis_aries
ENSACLG00000001926	safb	95	40.387	ENSOARG00000007662	-	94	39.777	Ovis_aries
ENSACLG00000001926	safb	64	44.147	ENSPPAG00000035129	SAFB	95	42.047	Pan_paniscus
ENSACLG00000001926	safb	65	42.484	ENSPPRG00000017197	SAFB	90	42.254	Panthera_pardus
ENSACLG00000001926	safb	64	43.118	ENSPTRG00000010335	SAFB	95	42.047	Pan_troglodytes
ENSACLG00000001926	safb	64	42.717	ENSPANG00000007770	SAFB	95	41.812	Papio_anubis
ENSACLG00000001926	safb	99	61.287	ENSPKIG00000009902	safb	99	61.356	Paramormyrops_kingsleyae
ENSACLG00000001926	safb	98	47.312	ENSPSIG00000011679	-	98	48.249	Pelodiscus_sinensis
ENSACLG00000001926	safb	98	46.046	ENSPSIG00000009367	-	96	46.221	Pelodiscus_sinensis
ENSACLG00000001926	safb	60	49.813	ENSPCIG00000009504	-	95	49.585	Phascolarctos_cinereus
ENSACLG00000001926	safb	100	70.662	ENSPFOG00000007745	safb	100	70.412	Poecilia_formosa
ENSACLG00000001926	safb	100	67.861	ENSPLAG00000001614	safb	100	67.622	Poecilia_latipinna
ENSACLG00000001926	safb	100	70.787	ENSPMEG00000021023	safb	100	70.537	Poecilia_mexicana
ENSACLG00000001926	safb	100	69.202	ENSPREG00000012496	safb	100	68.957	Poecilia_reticulata
ENSACLG00000001926	safb	64	42.998	ENSPPYG00000009428	SAFB	89	43.060	Pongo_abelii
ENSACLG00000001926	safb	62	37.774	ENSPCAG00000006475	SAFB	95	38.864	Procavia_capensis
ENSACLG00000001926	safb	95	41.388	ENSPCOG00000014090	SAFB	89	40.791	Propithecus_coquereli
ENSACLG00000001926	safb	72	55.455	ENSPVAG00000004913	SAFB	56	55.455	Pteropus_vampyrus
ENSACLG00000001926	safb	99	63.325	ENSPNAG00000021838	safb	99	64.345	Pygocentrus_nattereri
ENSACLG00000001926	safb	51	60.163	ENSRNOG00000050543	Safb	71	60.656	Rattus_norvegicus
ENSACLG00000001926	safb	64	44.618	ENSRBIG00000042509	SAFB	86	45.149	Rhinopithecus_bieti
ENSACLG00000001926	safb	64	42.763	ENSRROG00000029278	SAFB	95	42.047	Rhinopithecus_roxellana
ENSACLG00000001926	safb	64	43.987	ENSSBOG00000026291	SAFB	95	42.269	Saimiri_boliviensis_boliviensis
ENSACLG00000001926	safb	99	61.565	ENSSFOG00015008156	safb	99	61.345	Scleropages_formosus
ENSACLG00000001926	safb	100	79.570	ENSSMAG00000009316	safb	100	79.570	Scophthalmus_maximus
ENSACLG00000001926	safb	100	84.237	ENSSDUG00000009652	safb	100	83.733	Seriola_dumerili
ENSACLG00000001926	safb	100	80.884	ENSSLDG00000001670	safb	100	80.645	Seriola_lalandi_dorsalis
ENSACLG00000001926	safb	58	40.468	ENSSARG00000010475	SAFB	98	38.605	Sorex_araneus
ENSACLG00000001926	safb	51	46.089	ENSSPUG00000009747	-	96	42.146	Sphenodon_punctatus
ENSACLG00000001926	safb	99	77.525	ENSSPAG00000015682	safb	99	77.525	Stegastes_partitus
ENSACLG00000001926	safb	62	42.061	ENSSSCG00000013522	SAFB	96	42.656	Sus_scrofa
ENSACLG00000001926	safb	62	43.361	ENSTGUG00000000489	-	96	50.117	Taeniopygia_guttata
ENSACLG00000001926	safb	63	42.667	ENSTGUG00000000502	-	94	46.028	Taeniopygia_guttata
ENSACLG00000001926	safb	100	74.248	ENSTRUG00000003567	safb	100	74.128	Takifugu_rubripes
ENSACLG00000001926	safb	91	61.911	ENSTNIG00000015470	safb	100	62.655	Tetraodon_nigroviridis
ENSACLG00000001926	safb	83	75.000	ENSTTRG00000013588	SAFB	73	75.000	Tursiops_truncatus
ENSACLG00000001926	safb	72	43.696	ENSUMAG00000009734	SAFB	85	43.599	Ursus_maritimus
ENSACLG00000001926	safb	65	42.484	ENSVVUG00000013720	SAFB	77	42.518	Vulpes_vulpes
ENSACLG00000001926	safb	100	71.036	ENSXMAG00000003458	safb	100	70.787	Xiphophorus_maculatus