EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000002018 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: si:dkey-85a20.4
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 13324 bases
Position: chr13:11624315-11637638
Accession: ZDB-GENE-090313-347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000002947	SpoU_methylase	PF00588.19	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000003013	-	543	-	ENSACLP00000002947	181 (aa)	-	-

Gene Model

Click here to download ENSACLG00000002018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000002018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000002018	si:dkey-85a20.4	100	97.238	ENSACIG00000020931	si:dkey-85a20.4	100	97.238	Amphilophus_citrinellus
ENSACLG00000002018	si:dkey-85a20.4	100	95.055	ENSAOCG00000009950	si:dkey-85a20.4	99	95.055	Amphiprion_ocellaris
ENSACLG00000002018	si:dkey-85a20.4	100	95.580	ENSAPEG00000012906	si:dkey-85a20.4	99	95.580	Amphiprion_percula
ENSACLG00000002018	si:dkey-85a20.4	100	83.425	ENSAMXG00000018028	si:dkey-85a20.4	94	83.425	Astyanax_mexicanus
ENSACLG00000002018	si:dkey-85a20.4	86	54.777	ENSCING00000006232	-	61	54.777	Ciona_intestinalis
ENSACLG00000002018	si:dkey-85a20.4	86	89.032	ENSCVAG00000011124	-	100	89.032	Cyprinodon_variegatus
ENSACLG00000002018	si:dkey-85a20.4	100	79.235	ENSDARG00000092550	si:dkey-85a20.4	95	79.235	Danio_rerio
ENSACLG00000002018	si:dkey-85a20.4	99	86.667	ENSHCOG00000013439	si:dkey-85a20.4	99	86.667	Hippocampus_comes
ENSACLG00000002018	si:dkey-85a20.4	88	92.500	ENSLBEG00000008830	-	100	92.500	Labrus_bergylta
ENSACLG00000002018	si:dkey-85a20.4	100	69.399	MGP_CAROLIEiJ_G0031729	Tarbp1	55	69.399	Mus_caroli
ENSACLG00000002018	si:dkey-85a20.4	100	98.343	ENSNBRG00000014368	si:dkey-85a20.4	100	98.343	Neolamprologus_brichardi
ENSACLG00000002018	si:dkey-85a20.4	100	92.818	ENSOMEG00000001519	-	99	92.818	Oryzias_melastigma
ENSACLG00000002018	si:dkey-85a20.4	100	88.398	ENSPMGG00000019801	si:dkey-85a20.4	99	88.398	Periophthalmus_magnuspinnatus
ENSACLG00000002018	si:dkey-85a20.4	76	80.576	ENSPNAG00000019497	si:dkey-85a20.4	99	80.576	Pygocentrus_nattereri
ENSACLG00000002018	si:dkey-85a20.4	87	89.308	ENSTRUG00000021368	si:dkey-85a20.4	99	89.308	Takifugu_rubripes