EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000002255 (Gene tree)
Gene ID: 113030287
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 22673 bases
Position: chr10:16459136-16481808
Accession: ZDB-GENE-030131-9180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000003359	Exo_endo_phos	PF03372.23	1.1e-13	1	1
ENSACLP00000003287	Exo_endo_phos	PF03372.23	1.6e-13	1	1
ENSACLP00000003321	Exo_endo_phos	PF03372.23	1.7e-13	1	1
ENSACLP00000003359	DUF1866	PF08952.11	7.2e-58	1	1
ENSACLP00000003321	DUF1866	PF08952.11	8.6e-58	1	1
ENSACLP00000003287	DUF1866	PF08952.11	8.8e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000003437	-	4033	-	ENSACLP00000003359	1331 (aa)	-	-
ENSACLT00000003364	-	5035	-	ENSACLP00000003287	1665 (aa)	-	-
ENSACLT00000003398	-	4957	-	ENSACLP00000003321	1639 (aa)	-	-

Gene Model

Click here to download ENSACLG00000002255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000002255's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000002255	synj1	100	69.350	ENSG00000159082	SYNJ1	100	82.783	Homo_sapiens
ENSACLG00000002255	synj1	100	91.617	ENSAPOG00000002809	synj1	100	90.593	Acanthochromis_polyacanthus
ENSACLG00000002255	synj1	96	68.172	ENSAMEG00000015028	SYNJ1	82	64.697	Ailuropoda_melanoleuca
ENSACLG00000002255	synj1	99	91.874	ENSACIG00000008857	synj1	99	92.629	Amphilophus_citrinellus
ENSACLG00000002255	synj1	100	91.991	ENSAOCG00000009835	synj1	100	90.761	Amphiprion_ocellaris
ENSACLG00000002255	synj1	100	89.022	ENSAPEG00000021010	synj1	100	88.164	Amphiprion_percula
ENSACLG00000002255	synj1	100	88.831	ENSATEG00000002306	synj1	100	86.482	Anabas_testudineus
ENSACLG00000002255	synj1	89	70.120	ENSAPLG00000011832	SYNJ1	83	66.642	Anas_platyrhynchos
ENSACLG00000002255	synj1	95	69.080	ENSACAG00000003006	-	100	68.136	Anolis_carolinensis
ENSACLG00000002255	synj1	100	67.054	ENSANAG00000027325	SYNJ1	100	67.398	Aotus_nancymaae
ENSACLG00000002255	synj1	99	83.774	ENSAMXG00000008208	synj1	99	75.404	Astyanax_mexicanus
ENSACLG00000002255	synj1	99	67.589	ENSBTAG00000003063	SYNJ1	83	75.316	Bos_taurus
ENSACLG00000002255	synj1	99	69.568	ENSCJAG00000009187	SYNJ1	98	70.431	Callithrix_jacchus
ENSACLG00000002255	synj1	96	69.716	ENSCAFG00000009041	SYNJ1	99	68.082	Canis_familiaris
ENSACLG00000002255	synj1	100	68.917	ENSCAFG00020025776	SYNJ1	98	66.247	Canis_lupus_dingo
ENSACLG00000002255	synj1	99	68.691	ENSCHIG00000005095	SYNJ1	91	63.963	Capra_hircus
ENSACLG00000002255	synj1	100	67.495	ENSTSYG00000014541	SYNJ1	98	70.481	Carlito_syrichta
ENSACLG00000002255	synj1	86	62.777	ENSCAPG00000014483	SYNJ1	75	71.815	Cavia_aperea
ENSACLG00000002255	synj1	98	69.335	ENSCPOG00000012182	SYNJ1	98	69.775	Cavia_porcellus
ENSACLG00000002255	synj1	100	67.275	ENSCCAG00000020825	SYNJ1	98	70.118	Cebus_capucinus
ENSACLG00000002255	synj1	99	68.703	ENSCATG00000033891	SYNJ1	98	71.348	Cercocebus_atys
ENSACLG00000002255	synj1	96	67.519	ENSCLAG00000009796	SYNJ1	100	82.158	Chinchilla_lanigera
ENSACLG00000002255	synj1	100	66.499	ENSCSAG00000009654	SYNJ1	92	72.615	Chlorocebus_sabaeus
ENSACLG00000002255	synj1	77	72.523	ENSCHOG00000012390	SYNJ1	54	72.608	Choloepus_hoffmanni
ENSACLG00000002255	synj1	91	72.347	ENSCPBG00000006402	SYNJ1	96	71.648	Chrysemys_picta_bellii
ENSACLG00000002255	synj1	99	69.455	ENSCANG00000031359	SYNJ1	92	73.583	Colobus_angolensis_palliatus
ENSACLG00000002255	synj1	99	69.115	ENSCGRG00001010861	Synj1	100	67.502	Cricetulus_griseus_chok1gshd
ENSACLG00000002255	synj1	100	66.353	ENSCGRG00000015749	Synj1	100	82.014	Cricetulus_griseus_crigri
ENSACLG00000002255	synj1	95	89.810	ENSCSEG00000019614	synj1	98	90.837	Cynoglossus_semilaevis
ENSACLG00000002255	synj1	100	88.218	ENSCVAG00000019250	synj1	100	88.742	Cyprinodon_variegatus
ENSACLG00000002255	synj1	100	82.095	ENSDARG00000025011	synj1	100	82.491	Danio_rerio
ENSACLG00000002255	synj1	96	64.824	ENSDNOG00000010732	SYNJ1	82	67.284	Dasypus_novemcinctus
ENSACLG00000002255	synj1	53	81.081	ENSDORG00000014735	-	100	82.446	Dipodomys_ordii
ENSACLG00000002255	synj1	99	69.338	ENSEASG00005006287	SYNJ1	96	78.413	Equus_asinus_asinus
ENSACLG00000002255	synj1	99	69.123	ENSECAG00000004829	SYNJ1	99	68.759	Equus_caballus
ENSACLG00000002255	synj1	86	71.215	ENSEEUG00000005150	SYNJ1	58	71.295	Erinaceus_europaeus
ENSACLG00000002255	synj1	100	77.038	ENSELUG00000009731	synj1	99	76.349	Esox_lucius
ENSACLG00000002255	synj1	98	68.820	ENSFCAG00000012498	SYNJ1	97	70.686	Felis_catus
ENSACLG00000002255	synj1	70	60.324	ENSFALG00000004680	SYNJ1	78	60.097	Ficedula_albicollis
ENSACLG00000002255	synj1	100	66.546	ENSFDAG00000016818	SYNJ1	100	82.590	Fukomys_damarensis
ENSACLG00000002255	synj1	100	86.232	ENSFHEG00000017689	synj1	99	82.555	Fundulus_heteroclitus
ENSACLG00000002255	synj1	79	86.224	ENSGMOG00000014852	synj1	80	86.026	Gadus_morhua
ENSACLG00000002255	synj1	95	70.611	ENSGALG00000034317	SYNJ1	77	72.428	Gallus_gallus
ENSACLG00000002255	synj1	99	86.202	ENSGAFG00000019466	synj1	100	83.849	Gambusia_affinis
ENSACLG00000002255	synj1	99	83.869	ENSGACG00000020575	synj1	99	84.691	Gasterosteus_aculeatus
ENSACLG00000002255	synj1	97	69.985	ENSGAGG00000022523	SYNJ1	100	66.237	Gopherus_agassizii
ENSACLG00000002255	synj1	100	69.202	ENSGGOG00000015945	SYNJ1	98	70.889	Gorilla_gorilla
ENSACLG00000002255	synj1	100	99.850	ENSHBUG00000007774	synj1	100	99.850	Haplochromis_burtoni
ENSACLG00000002255	synj1	100	65.753	ENSHGLG00000006420	SYNJ1	100	82.014	Heterocephalus_glaber_female
ENSACLG00000002255	synj1	100	66.567	ENSHGLG00100012591	SYNJ1	100	82.014	Heterocephalus_glaber_male
ENSACLG00000002255	synj1	95	94.389	ENSHCOG00000012774	synj1	96	94.389	Hippocampus_comes
ENSACLG00000002255	synj1	98	82.675	ENSIPUG00000010691	SYNJ1	99	74.178	Ictalurus_punctatus
ENSACLG00000002255	synj1	98	67.332	ENSSTOG00000015806	SYNJ1	98	69.876	Ictidomys_tridecemlineatus
ENSACLG00000002255	synj1	98	62.676	ENSJJAG00000020168	Synj1	81	65.298	Jaculus_jaculus
ENSACLG00000002255	synj1	100	80.557	ENSKMAG00000004221	synj1	100	82.374	Kryptolebias_marmoratus
ENSACLG00000002255	synj1	100	86.207	ENSLBEG00000015081	synj1	99	85.136	Labrus_bergylta
ENSACLG00000002255	synj1	99	68.233	ENSLACG00000005928	SYNJ1	74	75.713	Latimeria_chalumnae
ENSACLG00000002255	synj1	97	73.723	ENSLOCG00000009230	synj1	88	72.602	Lepisosteus_oculatus
ENSACLG00000002255	synj1	98	66.617	ENSLAFG00000011806	SYNJ1	81	69.775	Loxodonta_africana
ENSACLG00000002255	synj1	97	67.052	ENSMFAG00000018883	SYNJ1	97	69.781	Macaca_fascicularis
ENSACLG00000002255	synj1	100	66.068	ENSMMUG00000004624	SYNJ1	98	69.165	Macaca_mulatta
ENSACLG00000002255	synj1	99	68.679	ENSMNEG00000040077	SYNJ1	93	69.404	Macaca_nemestrina
ENSACLG00000002255	synj1	99	68.703	ENSMLEG00000037029	SYNJ1	98	70.275	Mandrillus_leucophaeus
ENSACLG00000002255	synj1	100	90.375	ENSMAMG00000013404	synj1	100	87.993	Mastacembelus_armatus
ENSACLG00000002255	synj1	100	99.939	ENSMZEG00005024358	synj1	100	99.939	Maylandia_zebra
ENSACLG00000002255	synj1	95	68.255	ENSMGAG00000014522	SYNJ1	83	65.334	Meleagris_gallopavo
ENSACLG00000002255	synj1	100	66.498	ENSMAUG00000009743	Synj1	100	82.158	Mesocricetus_auratus
ENSACLG00000002255	synj1	97	69.611	ENSMICG00000034953	SYNJ1	99	69.260	Microcebus_murinus
ENSACLG00000002255	synj1	99	83.371	ENSMMOG00000010203	synj1	99	85.964	Mola_mola
ENSACLG00000002255	synj1	96	64.697	ENSMODG00000021073	SYNJ1	82	72.736	Monodelphis_domestica
ENSACLG00000002255	synj1	100	89.454	ENSMALG00000014015	synj1	100	85.433	Monopterus_albus
ENSACLG00000002255	synj1	98	67.283	MGP_CAROLIEiJ_G0020951	Synj1	100	82.590	Mus_caroli
ENSACLG00000002255	synj1	98	67.630	ENSMUSG00000022973	Synj1	100	82.590	Mus_musculus
ENSACLG00000002255	synj1	95	68.405	MGP_PahariEiJ_G0016656	Synj1	100	82.734	Mus_pahari
ENSACLG00000002255	synj1	98	67.481	MGP_SPRETEiJ_G0021857	Synj1	100	82.734	Mus_spretus
ENSACLG00000002255	synj1	96	66.814	ENSMPUG00000001153	SYNJ1	82	67.281	Mustela_putorius_furo
ENSACLG00000002255	synj1	51	80.207	ENSMLUG00000026584	-	99	80.838	Myotis_lucifugus
ENSACLG00000002255	synj1	62	61.717	ENSMLUG00000005764	-	60	70.078	Myotis_lucifugus
ENSACLG00000002255	synj1	98	66.863	ENSNGAG00000000453	Synj1	100	82.446	Nannospalax_galili
ENSACLG00000002255	synj1	100	91.379	ENSNBRG00000011936	synj1	99	91.898	Neolamprologus_brichardi
ENSACLG00000002255	synj1	85	66.234	ENSNLEG00000003734	SYNJ1	96	65.590	Nomascus_leucogenys
ENSACLG00000002255	synj1	76	73.408	ENSMEUG00000004158	-	67	73.408	Notamacropus_eugenii
ENSACLG00000002255	synj1	90	77.616	ENSOPRG00000013602	SYNJ1	70	77.616	Ochotona_princeps
ENSACLG00000002255	synj1	53	80.939	ENSODEG00000002409	-	100	82.158	Octodon_degus
ENSACLG00000002255	synj1	99	90.361	ENSONIG00000004667	synj1	92	91.685	Oreochromis_niloticus
ENSACLG00000002255	synj1	93	65.639	ENSOANG00000006929	SYNJ1	76	69.466	Ornithorhynchus_anatinus
ENSACLG00000002255	synj1	95	68.381	ENSOCUG00000001420	SYNJ1	82	66.618	Oryctolagus_cuniculus
ENSACLG00000002255	synj1	100	89.797	ENSORLG00000004320	synj1	100	89.647	Oryzias_latipes
ENSACLG00000002255	synj1	99	85.639	ENSORLG00020011994	synj1	98	85.412	Oryzias_latipes_hni
ENSACLG00000002255	synj1	98	84.139	ENSORLG00015018077	synj1	95	84.758	Oryzias_latipes_hsok
ENSACLG00000002255	synj1	100	86.207	ENSOMEG00000014322	synj1	99	85.789	Oryzias_melastigma
ENSACLG00000002255	synj1	99	64.322	ENSOGAG00000006010	SYNJ1	81	64.462	Otolemur_garnettii
ENSACLG00000002255	synj1	99	65.855	ENSOARG00000013414	SYNJ1	75	71.405	Ovis_aries
ENSACLG00000002255	synj1	99	69.604	ENSPPAG00000026784	SYNJ1	98	70.463	Pan_paniscus
ENSACLG00000002255	synj1	98	68.820	ENSPPRG00000023469	SYNJ1	97	70.686	Panthera_pardus
ENSACLG00000002255	synj1	98	69.478	ENSPTIG00000007930	SYNJ1	97	70.764	Panthera_tigris_altaica
ENSACLG00000002255	synj1	100	69.276	ENSPTRG00000023787	SYNJ1	98	70.463	Pan_troglodytes
ENSACLG00000002255	synj1	100	69.276	ENSPTRG00000048135	-	97	70.644	Pan_troglodytes
ENSACLG00000002255	synj1	99	68.703	ENSPANG00000022531	SYNJ1	98	70.275	Papio_anubis
ENSACLG00000002255	synj1	82	85.585	ENSPKIG00000022603	synj1	89	84.995	Paramormyrops_kingsleyae
ENSACLG00000002255	synj1	96	90.985	ENSPMGG00000016831	synj1	99	90.902	Periophthalmus_magnuspinnatus
ENSACLG00000002255	synj1	100	67.341	ENSPEMG00000018767	Synj1	100	82.878	Peromyscus_maniculatus_bairdii
ENSACLG00000002255	synj1	99	51.709	ENSPMAG00000002887	synj1	74	60.341	Petromyzon_marinus
ENSACLG00000002255	synj1	98	67.551	ENSPCIG00000016372	SYNJ1	82	75.254	Phascolarctos_cinereus
ENSACLG00000002255	synj1	100	87.818	ENSPFOG00000016886	synj1	100	88.604	Poecilia_formosa
ENSACLG00000002255	synj1	99	86.572	ENSPLAG00000017559	synj1	100	88.487	Poecilia_latipinna
ENSACLG00000002255	synj1	99	85.489	ENSPMEG00000007643	synj1	100	83.852	Poecilia_mexicana
ENSACLG00000002255	synj1	100	89.565	ENSPREG00000012412	synj1	100	90.090	Poecilia_reticulata
ENSACLG00000002255	synj1	98	66.275	ENSPPYG00000011365	SYNJ1	92	69.457	Pongo_abelii
ENSACLG00000002255	synj1	82	81.429	ENSPCAG00000009906	SYNJ1	58	81.429	Procavia_capensis
ENSACLG00000002255	synj1	93	75.369	ENSPCOG00000024841	SYNJ1	95	75.682	Propithecus_coquereli
ENSACLG00000002255	synj1	95	64.027	ENSPVAG00000000892	SYNJ1	82	64.915	Pteropus_vampyrus
ENSACLG00000002255	synj1	100	96.255	ENSPNYG00000022989	synj1	100	96.255	Pundamilia_nyererei
ENSACLG00000002255	synj1	82	89.627	ENSPNAG00000021119	synj1	91	89.445	Pygocentrus_nattereri
ENSACLG00000002255	synj1	96	70.566	ENSRNOG00000002051	Synj1	97	71.248	Rattus_norvegicus
ENSACLG00000002255	synj1	99	69.380	ENSRBIG00000034477	SYNJ1	98	70.275	Rhinopithecus_bieti
ENSACLG00000002255	synj1	100	67.079	ENSRROG00000039256	SYNJ1	98	70.353	Rhinopithecus_roxellana
ENSACLG00000002255	synj1	100	66.836	ENSSBOG00000021001	SYNJ1	98	70.275	Saimiri_boliviensis_boliviensis
ENSACLG00000002255	synj1	96	65.889	ENSSHAG00000008538	SYNJ1	77	72.103	Sarcophilus_harrisii
ENSACLG00000002255	synj1	100	83.247	ENSSFOG00015006095	synj1	100	73.301	Scleropages_formosus
ENSACLG00000002255	synj1	99	86.937	ENSSMAG00000018066	synj1	98	88.823	Scophthalmus_maximus
ENSACLG00000002255	synj1	100	88.403	ENSSDUG00000013058	synj1	100	88.282	Seriola_dumerili
ENSACLG00000002255	synj1	100	89.865	ENSSLDG00000021406	synj1	100	91.452	Seriola_lalandi_dorsalis
ENSACLG00000002255	synj1	93	71.235	ENSSPUG00000012552	SYNJ1	84	67.941	Sphenodon_punctatus
ENSACLG00000002255	synj1	100	90.255	ENSSPAG00000017029	synj1	99	90.789	Stegastes_partitus
ENSACLG00000002255	synj1	96	89.205	ENSSPAG00000006812	SYNJ1	100	88.636	Stegastes_partitus
ENSACLG00000002255	synj1	100	68.699	ENSSSCG00000012035	SYNJ1	100	69.213	Sus_scrofa
ENSACLG00000002255	synj1	100	69.639	ENSTGUG00000013445	SYNJ1	83	66.667	Taeniopygia_guttata
ENSACLG00000002255	synj1	100	83.670	ENSTRUG00000006907	synj1	97	85.357	Takifugu_rubripes
ENSACLG00000002255	synj1	100	78.799	ENSTNIG00000009940	synj1	98	79.680	Tetraodon_nigroviridis
ENSACLG00000002255	synj1	76	83.117	ENSTBEG00000016298	SYNJ1	60	81.962	Tupaia_belangeri
ENSACLG00000002255	synj1	94	77.373	ENSTTRG00000002222	SYNJ1	73	77.373	Tursiops_truncatus
ENSACLG00000002255	synj1	96	70.878	ENSUAMG00000018606	SYNJ1	98	79.303	Ursus_americanus
ENSACLG00000002255	synj1	97	72.283	ENSUMAG00000018419	SYNJ1	99	78.624	Ursus_maritimus
ENSACLG00000002255	synj1	86	81.429	ENSVPAG00000001241	SYNJ1	71	81.429	Vicugna_pacos
ENSACLG00000002255	synj1	100	66.739	ENSVVUG00000023125	SYNJ1	100	66.788	Vulpes_vulpes
ENSACLG00000002255	synj1	96	65.702	ENSXETG00000009899	synj1	84	64.209	Xenopus_tropicalis
ENSACLG00000002255	synj1	99	86.456	ENSXCOG00000011896	synj1	99	87.709	Xiphophorus_couchianus
ENSACLG00000002255	synj1	100	88.739	ENSXMAG00000017524	synj1	100	89.640	Xiphophorus_maculatus