EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000002575 (Gene tree)
Gene ID: 113013454
Gene Symbol: larp4aa
Alias: larp4a|si:ch211-156j22.2
Full Name: la-related protein 4-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 13703 bases
Position: chr20:27981982-27995684
Accession: 113013454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000003830	La	PF05383.17	1.9e-17	1	1
ENSACLP00000003816	La	PF05383.17	1.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000003913	-	5557	-	ENSACLP00000003830	795 (aa)	XP_026010144	UPI0003AFD0C5
ENSACLT00000003899	-	5599	-	ENSACLP00000003816	809 (aa)	XP_026010143	UPI0003AF79E2

Gene Model

Click here to download ENSACLG00000002575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000002575's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000002575	larp4aa	82	62.133	ENSG00000161813	LARP4	99	57.882	Homo_sapiens
ENSACLG00000002575	larp4aa	100	86.962	ENSAPOG00000007142	larp4aa	100	87.700	Acanthochromis_polyacanthus
ENSACLG00000002575	larp4aa	95	51.847	ENSAPOG00000021331	larp4ab	100	50.631	Acanthochromis_polyacanthus
ENSACLG00000002575	larp4aa	100	88.065	ENSACIG00000001198	larp4aa	100	88.065	Amphilophus_citrinellus
ENSACLG00000002575	larp4aa	100	87.101	ENSAOCG00000002408	larp4aa	100	87.346	Amphiprion_ocellaris
ENSACLG00000002575	larp4aa	95	50.638	ENSAOCG00000006387	larp4ab	100	49.437	Amphiprion_ocellaris
ENSACLG00000002575	larp4aa	100	86.978	ENSAPEG00000019058	larp4aa	100	87.224	Amphiprion_percula
ENSACLG00000002575	larp4aa	95	48.597	ENSATEG00000001018	larp4ab	100	46.760	Anabas_testudineus
ENSACLG00000002575	larp4aa	100	85.482	ENSATEG00000020715	larp4aa	100	85.106	Anabas_testudineus
ENSACLG00000002575	larp4aa	95	49.421	ENSAPLG00000013661	LARP4	51	65.354	Anas_platyrhynchos
ENSACLG00000002575	larp4aa	95	48.338	ENSACAG00000017133	LARP4	50	63.708	Anolis_carolinensis
ENSACLG00000002575	larp4aa	82	62.933	ENSANAG00000029342	LARP4	97	62.632	Aotus_nancymaae
ENSACLG00000002575	larp4aa	100	51.981	ENSAMXG00000001515	larp4ab	100	52.563	Astyanax_mexicanus
ENSACLG00000002575	larp4aa	100	65.947	ENSAMXG00000036493	larp4aa	100	66.426	Astyanax_mexicanus
ENSACLG00000002575	larp4aa	82	62.400	ENSCJAG00000021131	LARP4	97	62.005	Callithrix_jacchus
ENSACLG00000002575	larp4aa	82	61.518	ENSCAFG00020014554	LARP4	83	58.537	Canis_lupus_dingo
ENSACLG00000002575	larp4aa	82	62.198	ENSTSYG00000004342	LARP4	99	57.920	Carlito_syrichta
ENSACLG00000002575	larp4aa	94	35.891	ENSCAPG00000012942	LARP4	59	55.556	Cavia_aperea
ENSACLG00000002575	larp4aa	95	44.331	ENSCPOG00000020519	LARP4	52	54.798	Cavia_porcellus
ENSACLG00000002575	larp4aa	87	60.517	ENSCCAG00000024439	LARP4	97	62.105	Cebus_capucinus
ENSACLG00000002575	larp4aa	95	47.625	ENSCLAG00000001829	LARP4	53	61.856	Chinchilla_lanigera
ENSACLG00000002575	larp4aa	95	43.758	ENSCANG00000033097	-	79	75.862	Colobus_angolensis_palliatus
ENSACLG00000002575	larp4aa	82	63.467	ENSCANG00000029159	-	99	59.059	Colobus_angolensis_palliatus
ENSACLG00000002575	larp4aa	95	48.404	ENSCGRG00001010818	Larp4	51	64.116	Cricetulus_griseus_chok1gshd
ENSACLG00000002575	larp4aa	95	48.404	ENSCGRG00000009382	Larp4	52	64.116	Cricetulus_griseus_crigri
ENSACLG00000002575	larp4aa	100	81.242	ENSCSEG00000001963	larp4aa	100	81.364	Cynoglossus_semilaevis
ENSACLG00000002575	larp4aa	100	82.209	ENSCVAG00000005488	larp4aa	100	81.227	Cyprinodon_variegatus
ENSACLG00000002575	larp4aa	95	52.270	ENSDARG00000074979	larp4ab	84	82.550	Danio_rerio
ENSACLG00000002575	larp4aa	100	64.390	ENSDARG00000078401	larp4aa	100	64.434	Danio_rerio
ENSACLG00000002575	larp4aa	95	45.512	ENSDORG00000004013	Larp4	50	58.133	Dipodomys_ordii
ENSACLG00000002575	larp4aa	69	53.875	ENSETEG00000011683	LARP4	74	53.875	Echinops_telfairi
ENSACLG00000002575	larp4aa	66	39.362	ENSEBUG00000004426	LARP4	66	45.573	Eptatretus_burgeri
ENSACLG00000002575	larp4aa	65	57.563	ENSEASG00005004356	LARP4	81	61.180	Equus_asinus_asinus
ENSACLG00000002575	larp4aa	95	53.222	ENSELUG00000018650	larp4ab	72	78.947	Esox_lucius
ENSACLG00000002575	larp4aa	100	62.636	ENSELUG00000000395	larp4aa	100	61.084	Esox_lucius
ENSACLG00000002575	larp4aa	82	61.968	ENSFCAG00000031897	LARP4	96	61.680	Felis_catus
ENSACLG00000002575	larp4aa	80	50.749	ENSFALG00000002114	LARP4	57	63.990	Ficedula_albicollis
ENSACLG00000002575	larp4aa	95	48.454	ENSFDAG00000006406	-	53	61.954	Fukomys_damarensis
ENSACLG00000002575	larp4aa	95	46.213	ENSFHEG00000013854	larp4ab	53	56.359	Fundulus_heteroclitus
ENSACLG00000002575	larp4aa	100	81.242	ENSFHEG00000004338	larp4aa	100	80.877	Fundulus_heteroclitus
ENSACLG00000002575	larp4aa	100	71.805	ENSGMOG00000008246	larp4aa	100	71.805	Gadus_morhua
ENSACLG00000002575	larp4aa	91	48.518	ENSGALG00000042122	LARP4	50	65.354	Gallus_gallus
ENSACLG00000002575	larp4aa	95	47.510	ENSGAFG00000021777	larp4ab	54	57.457	Gambusia_affinis
ENSACLG00000002575	larp4aa	95	48.575	ENSGACG00000000680	larp4ab	88	63.003	Gasterosteus_aculeatus
ENSACLG00000002575	larp4aa	100	80.299	ENSGACG00000008381	larp4aa	98	89.227	Gasterosteus_aculeatus
ENSACLG00000002575	larp4aa	95	49.490	ENSGAGG00000006969	LARP4	51	65.183	Gopherus_agassizii
ENSACLG00000002575	larp4aa	83	61.979	ENSGGOG00000015230	LARP4	71	75.465	Gorilla_gorilla
ENSACLG00000002575	larp4aa	100	99.753	ENSHBUG00000023074	larp4aa	100	99.753	Haplochromis_burtoni
ENSACLG00000002575	larp4aa	80	48.620	ENSHGLG00000013875	-	93	47.310	Heterocephalus_glaber_female
ENSACLG00000002575	larp4aa	95	45.513	ENSHGLG00100011678	-	96	44.730	Heterocephalus_glaber_male
ENSACLG00000002575	larp4aa	95	47.097	ENSHGLG00100016984	-	53	61.440	Heterocephalus_glaber_male
ENSACLG00000002575	larp4aa	100	74.785	ENSHCOG00000015951	larp4aa	100	74.785	Hippocampus_comes
ENSACLG00000002575	larp4aa	95	46.497	ENSHCOG00000020857	larp4ab	71	51.887	Hippocampus_comes
ENSACLG00000002575	larp4aa	100	63.406	ENSIPUG00000007514	larp4aa	100	62.667	Ictalurus_punctatus
ENSACLG00000002575	larp4aa	95	48.953	ENSIPUG00000021659	larp4ab	91	54.971	Ictalurus_punctatus
ENSACLG00000002575	larp4aa	95	48.790	ENSSTOG00000003553	LARP4	52	63.874	Ictidomys_tridecemlineatus
ENSACLG00000002575	larp4aa	100	81.227	ENSKMAG00000006800	larp4aa	100	80.736	Kryptolebias_marmoratus
ENSACLG00000002575	larp4aa	95	48.608	ENSKMAG00000018556	larp4ab	100	47.903	Kryptolebias_marmoratus
ENSACLG00000002575	larp4aa	97	83.333	ENSLBEG00000014537	larp4aa	100	81.280	Labrus_bergylta
ENSACLG00000002575	larp4aa	95	48.420	ENSLBEG00000019306	larp4ab	100	47.759	Labrus_bergylta
ENSACLG00000002575	larp4aa	99	50.719	ENSLACG00000019090	LARP4	56	62.763	Latimeria_chalumnae
ENSACLG00000002575	larp4aa	100	60.562	ENSLOCG00000007113	larp4ab	100	60.462	Lepisosteus_oculatus
ENSACLG00000002575	larp4aa	81	47.312	ENSLAFG00000005160	LARP4	52	61.818	Loxodonta_africana
ENSACLG00000002575	larp4aa	82	62.933	ENSMFAG00000043681	LARP4	97	63.032	Macaca_fascicularis
ENSACLG00000002575	larp4aa	82	62.933	ENSMMUG00000008172	LARP4	97	63.032	Macaca_mulatta
ENSACLG00000002575	larp4aa	77	53.049	ENSMNEG00000037799	-	80	75.862	Macaca_nemestrina
ENSACLG00000002575	larp4aa	82	62.933	ENSMLEG00000039661	LARP4	99	58.588	Mandrillus_leucophaeus
ENSACLG00000002575	larp4aa	100	86.626	ENSMAMG00000011206	larp4aa	100	85.521	Mastacembelus_armatus
ENSACLG00000002575	larp4aa	95	50.193	ENSMAMG00000002616	larp4ab	54	61.671	Mastacembelus_armatus
ENSACLG00000002575	larp4aa	100	99.753	ENSMZEG00005001813	larp4aa	100	99.753	Maylandia_zebra
ENSACLG00000002575	larp4aa	91	47.709	ENSMGAG00000010598	LARP4	50	65.274	Meleagris_gallopavo
ENSACLG00000002575	larp4aa	65	77.731	ENSMICG00000030156	-	85	67.797	Microcebus_murinus
ENSACLG00000002575	larp4aa	69	76.538	ENSMICG00000012388	-	95	75.849	Microcebus_murinus
ENSACLG00000002575	larp4aa	95	48.972	ENSMOCG00000020635	Larp4	51	64.116	Microtus_ochrogaster
ENSACLG00000002575	larp4aa	95	46.104	ENSMMOG00000021861	larp4ab	92	57.865	Mola_mola
ENSACLG00000002575	larp4aa	100	78.915	ENSMMOG00000004785	larp4aa	100	78.915	Mola_mola
ENSACLG00000002575	larp4aa	72	63.580	MGP_CAROLIEiJ_G0020281	Larp4	83	63.467	Mus_caroli
ENSACLG00000002575	larp4aa	95	47.995	ENSMUSG00000023025	Larp4	60	63.492	Mus_musculus
ENSACLG00000002575	larp4aa	95	48.379	MGP_PahariEiJ_G0020284	Larp4	51	63.564	Mus_pahari
ENSACLG00000002575	larp4aa	81	62.667	ENSMLUG00000012513	-	88	62.105	Myotis_lucifugus
ENSACLG00000002575	larp4aa	100	98.393	ENSNBRG00000011292	larp4aa	100	98.393	Neolamprologus_brichardi
ENSACLG00000002575	larp4aa	87	60.886	ENSNLEG00000017798	LARP4	99	58.118	Nomascus_leucogenys
ENSACLG00000002575	larp4aa	95	47.680	ENSONIG00000019124	larp4ab	50	60.963	Oreochromis_niloticus
ENSACLG00000002575	larp4aa	100	97.358	ENSONIG00000011895	larp4aa	100	97.358	Oreochromis_niloticus
ENSACLG00000002575	larp4aa	67	53.943	ENSOANG00000004373	LARP4	67	62.467	Ornithorhynchus_anatinus
ENSACLG00000002575	larp4aa	95	47.141	ENSOCUG00000026872	-	51	62.500	Oryctolagus_cuniculus
ENSACLG00000002575	larp4aa	95	46.871	ENSOCUG00000021417	-	51	61.394	Oryctolagus_cuniculus
ENSACLG00000002575	larp4aa	100	78.352	ENSORLG00000006758	larp4aa	100	76.478	Oryzias_latipes
ENSACLG00000002575	larp4aa	100	77.983	ENSORLG00020010258	larp4aa	100	76.232	Oryzias_latipes_hni
ENSACLG00000002575	larp4aa	100	77.368	ENSORLG00015002292	larp4aa	100	75.616	Oryzias_latipes_hsok
ENSACLG00000002575	larp4aa	100	74.723	ENSOMEG00000019749	larp4aa	96	85.028	Oryzias_melastigma
ENSACLG00000002575	larp4aa	67	62.240	ENSPPAG00000035100	LARP4	87	57.820	Pan_paniscus
ENSACLG00000002575	larp4aa	82	61.968	ENSPPRG00000004522	LARP4	96	61.680	Panthera_pardus
ENSACLG00000002575	larp4aa	82	61.968	ENSPTIG00000015617	LARP4	96	61.680	Panthera_tigris_altaica
ENSACLG00000002575	larp4aa	82	62.133	ENSPTRG00000004935	LARP4	99	57.882	Pan_troglodytes
ENSACLG00000002575	larp4aa	82	62.933	ENSPANG00000022964	LARP4	99	58.588	Papio_anubis
ENSACLG00000002575	larp4aa	100	58.571	ENSPKIG00000005950	larp4ab	100	58.111	Paramormyrops_kingsleyae
ENSACLG00000002575	larp4aa	82	63.117	ENSPSIG00000015867	LARP4	88	63.117	Pelodiscus_sinensis
ENSACLG00000002575	larp4aa	96	49.246	ENSPCIG00000000384	LARP4	99	49.047	Phascolarctos_cinereus
ENSACLG00000002575	larp4aa	95	47.558	ENSPFOG00000009764	larp4ab	54	58.168	Poecilia_formosa
ENSACLG00000002575	larp4aa	100	81.929	ENSPFOG00000013148	larp4aa	100	81.630	Poecilia_formosa
ENSACLG00000002575	larp4aa	100	81.615	ENSPLAG00000013626	larp4aa	100	81.312	Poecilia_latipinna
ENSACLG00000002575	larp4aa	95	47.754	ENSPLAG00000008502	larp4ab	54	58.168	Poecilia_latipinna
ENSACLG00000002575	larp4aa	95	47.510	ENSPMEG00000002720	larp4ab	56	56.563	Poecilia_mexicana
ENSACLG00000002575	larp4aa	100	82.051	ENSPMEG00000014271	larp4aa	100	82.051	Poecilia_mexicana
ENSACLG00000002575	larp4aa	100	81.468	ENSPREG00000022597	larp4aa	100	81.716	Poecilia_reticulata
ENSACLG00000002575	larp4aa	64	54.373	ENSPPYG00000004512	-	73	61.440	Pongo_abelii
ENSACLG00000002575	larp4aa	78	65.763	ENSPCAG00000003671	LARP4	80	65.763	Procavia_capensis
ENSACLG00000002575	larp4aa	82	62.834	ENSPCOG00000026291	LARP4	99	62.593	Propithecus_coquereli
ENSACLG00000002575	larp4aa	100	100.000	ENSPNYG00000022265	larp4aa	100	100.000	Pundamilia_nyererei
ENSACLG00000002575	larp4aa	96	55.013	ENSPNAG00000014478	larp4ab	99	55.513	Pygocentrus_nattereri
ENSACLG00000002575	larp4aa	97	65.081	ENSPNAG00000024770	larp4aa	99	64.492	Pygocentrus_nattereri
ENSACLG00000002575	larp4aa	68	54.941	ENSRBIG00000036890	-	81	53.992	Rhinopithecus_bieti
ENSACLG00000002575	larp4aa	68	62.933	ENSRBIG00000038857	-	92	60.714	Rhinopithecus_bieti
ENSACLG00000002575	larp4aa	68	54.941	ENSRROG00000025487	-	92	56.555	Rhinopithecus_roxellana
ENSACLG00000002575	larp4aa	87	61.255	ENSRROG00000042764	-	99	61.255	Rhinopithecus_roxellana
ENSACLG00000002575	larp4aa	82	62.133	ENSSBOG00000026650	LARP4	97	61.842	Saimiri_boliviensis_boliviensis
ENSACLG00000002575	larp4aa	100	60.510	ENSSFOG00015014096	larp4ab	100	60.242	Scleropages_formosus
ENSACLG00000002575	larp4aa	99	59.873	ENSSFOG00015003868	larp4aa	99	62.245	Scleropages_formosus
ENSACLG00000002575	larp4aa	100	85.732	ENSSMAG00000019473	larp4aa	100	84.152	Scophthalmus_maximus
ENSACLG00000002575	larp4aa	95	50.641	ENSSMAG00000002838	larp4ab	100	49.808	Scophthalmus_maximus
ENSACLG00000002575	larp4aa	100	87.469	ENSSDUG00000010621	larp4aa	100	88.329	Seriola_dumerili
ENSACLG00000002575	larp4aa	95	51.334	ENSSDUG00000006655	larp4ab	51	66.321	Seriola_dumerili
ENSACLG00000002575	larp4aa	95	51.341	ENSSLDG00000001791	larp4ab	100	50.319	Seriola_lalandi_dorsalis
ENSACLG00000002575	larp4aa	100	86.732	ENSSLDG00000004942	larp4aa	100	87.469	Seriola_lalandi_dorsalis
ENSACLG00000002575	larp4aa	81	53.019	ENSSARG00000012469	LARP4	68	60.724	Sorex_araneus
ENSACLG00000002575	larp4aa	90	46.871	ENSSPUG00000016552	LARP4	50	62.338	Sphenodon_punctatus
ENSACLG00000002575	larp4aa	87	90.123	ENSSPAG00000007222	larp4aa	93	90.300	Stegastes_partitus
ENSACLG00000002575	larp4aa	95	50.897	ENSSPAG00000002172	larp4ab	100	47.788	Stegastes_partitus
ENSACLG00000002575	larp4aa	73	55.056	ENSSSCG00000028516	LARP4	82	55.609	Sus_scrofa
ENSACLG00000002575	larp4aa	95	48.181	ENSTGUG00000003479	LARP4	51	64.249	Taeniopygia_guttata
ENSACLG00000002575	larp4aa	65	53.061	ENSTRUG00000007206	larp4ab	100	44.962	Takifugu_rubripes
ENSACLG00000002575	larp4aa	95	76.772	ENSTNIG00000015109	larp4aa	99	75.558	Tetraodon_nigroviridis
ENSACLG00000002575	larp4aa	95	45.849	ENSTNIG00000014571	larp4ab	100	44.177	Tetraodon_nigroviridis
ENSACLG00000002575	larp4aa	79	52.299	ENSTBEG00000005167	LARP4	84	52.299	Tupaia_belangeri
ENSACLG00000002575	larp4aa	95	46.692	ENSTTRG00000003764	LARP4	52	62.016	Tursiops_truncatus
ENSACLG00000002575	larp4aa	71	58.824	ENSVVUG00000024717	LARP4	83	58.333	Vulpes_vulpes
ENSACLG00000002575	larp4aa	100	76.923	ENSXCOG00000006387	larp4aa	100	77.289	Xiphophorus_couchianus
ENSACLG00000002575	larp4aa	95	47.655	ENSXMAG00000002156	larp4ab	54	59.158	Xiphophorus_maculatus
ENSACLG00000002575	larp4aa	100	82.173	ENSXMAG00000010519	larp4aa	100	82.051	Xiphophorus_maculatus