EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000002678 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 1486 bases
Position: chr8:25593430-25594915
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000003968	RVT_1	PF00078.27	4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000004053	-	1486	-	ENSACLP00000003968	420 (aa)	-	-

Gene Model

Click here to download ENSACLG00000002678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000002678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000002678	-	64	36.059	ENSACLG00000021701	-	67	36.059
ENSACLG00000002678	-	64	35.688	ENSACLG00000013847	-	62	35.688
ENSACLG00000002678	-	62	33.835	ENSACLG00000009390	-	71	34.586
ENSACLG00000002678	-	55	34.043	ENSACLG00000013289	-	70	34.043
ENSACLG00000002678	-	97	33.741	ENSACLG00000007712	-	68	33.741
ENSACLG00000002678	-	96	34.321	ENSACLG00000002535	-	57	34.321

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000002678	-	62	36.015	ENSAPOG00000011439	-	80	36.015	Acanthochromis_polyacanthus
ENSACLG00000002678	-	63	35.581	ENSCPBG00000005584	-	58	35.581	Chrysemys_picta_bellii
ENSACLG00000002678	-	66	32.258	ENSEBUG00000005844	-	60	32.258	Eptatretus_burgeri
ENSACLG00000002678	-	54	48.673	ENSEBUG00000007520	-	89	48.673	Eptatretus_burgeri
ENSACLG00000002678	-	65	32.353	ENSIPUG00000002895	-	65	33.456	Ictalurus_punctatus
ENSACLG00000002678	-	50	36.019	ENSLACG00000011328	-	91	36.019	Latimeria_chalumnae
ENSACLG00000002678	-	50	32.432	ENSLACG00000005904	-	78	32.432	Latimeria_chalumnae
ENSACLG00000002678	-	51	36.111	ENSORLG00020022076	-	58	36.111	Oryzias_latipes_hni
ENSACLG00000002678	-	57	32.099	ENSPSIG00000000968	-	78	32.099	Pelodiscus_sinensis
ENSACLG00000002678	-	63	35.227	ENSPFOG00000023854	-	60	35.227	Poecilia_formosa
ENSACLG00000002678	-	75	53.106	ENSPNYG00000002366	-	100	53.106	Pundamilia_nyererei
ENSACLG00000002678	-	62	33.206	ENSXMAG00000024510	-	72	33.206	Xiphophorus_maculatus