EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000002905 (Gene tree)
Gene ID: 113025607
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 15939 bases
Position: chr7:18097670-18113608
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	Domain number	Total number
ENSACLP00000004308	AF-4	PF05110.13	1	2
ENSACLP00000004308	AF-4	PF05110.13	2	2
ENSACLP00000004323	AF-4	PF05110.13	1	2
ENSACLP00000004323	AF-4	PF05110.13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000004396	-	3408	-	ENSACLP00000004308	1135 (aa)	-	-
ENSACLT00000004412	-	3330	-	ENSACLP00000004323	1109 (aa)	-	-

Gene Model

Click here to download ENSACLG00000002905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000002905's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000002905	-	73	32.680	ENSG00000172493	AFF1	97	36.296	Homo_sapiens
ENSACLG00000002905	-	54	48.387	ENSG00000144218	AFF3	96	39.062	Homo_sapiens
ENSACLG00000002905	-	99	63.652	ENSAPOG00000002994	-	100	63.127	Acanthochromis_polyacanthus
ENSACLG00000002905	-	57	61.290	ENSAMEG00000003337	AFF1	55	61.290	Ailuropoda_melanoleuca
ENSACLG00000002905	-	64	30.737	ENSACIG00000022732	aff2	61	41.667	Amphilophus_citrinellus
ENSACLG00000002905	-	78	83.651	ENSACIG00000021066	-	99	83.651	Amphilophus_citrinellus
ENSACLG00000002905	-	99	64.915	ENSAOCG00000020283	-	99	64.746	Amphiprion_ocellaris
ENSACLG00000002905	-	99	64.691	ENSAPEG00000018794	-	99	64.522	Amphiprion_percula
ENSACLG00000002905	-	99	61.345	ENSATEG00000015552	-	99	60.924	Anabas_testudineus
ENSACLG00000002905	-	97	32.452	ENSAPLG00000004059	AFF1	72	38.710	Anas_platyrhynchos
ENSACLG00000002905	-	56	47.312	ENSACAG00000012192	AFF1	72	36.300	Anolis_carolinensis
ENSACLG00000002905	-	65	36.562	ENSANAG00000017095	AFF1	70	36.232	Aotus_nancymaae
ENSACLG00000002905	-	57	36.792	ENSAMXG00000000387	aff2	57	44.758	Astyanax_mexicanus
ENSACLG00000002905	-	61	38.509	ENSBTAG00000018488	AFF1	70	35.417	Bos_taurus
ENSACLG00000002905	-	65	37.299	ENSCJAG00000006047	AFF1	70	36.941	Callithrix_jacchus
ENSACLG00000002905	-	56	61.290	ENSCAFG00000009476	AFF1	52	61.290	Canis_familiaris
ENSACLG00000002905	-	55	61.667	ENSCAFG00020008224	AFF1	53	61.667	Canis_lupus_dingo
ENSACLG00000002905	-	61	38.390	ENSCHIG00000008450	AFF1	71	36.111	Capra_hircus
ENSACLG00000002905	-	55	49.180	ENSCAPG00000012999	AFF3	65	50.000	Cavia_aperea
ENSACLG00000002905	-	55	49.180	ENSCPOG00000006346	AFF3	62	50.000	Cavia_porcellus
ENSACLG00000002905	-	76	35.560	ENSCATG00000039501	AFF1	70	36.473	Cercocebus_atys
ENSACLG00000002905	-	55	48.333	ENSCLAG00000017100	AFF3	64	48.333	Chinchilla_lanigera
ENSACLG00000002905	-	76	35.991	ENSCSAG00000004333	AFF1	70	36.580	Chlorocebus_sabaeus
ENSACLG00000002905	-	70	33.475	ENSCPBG00000020831	AFF2	50	42.471	Chrysemys_picta_bellii
ENSACLG00000002905	-	64	36.909	ENSCANG00000037514	AFF1	70	37.915	Colobus_angolensis_palliatus
ENSACLG00000002905	-	57	32.766	ENSCGRG00001015769	Aff1	52	44.583	Cricetulus_griseus_chok1gshd
ENSACLG00000002905	-	55	49.180	ENSCGRG00001014566	Aff3	53	50.000	Cricetulus_griseus_chok1gshd
ENSACLG00000002905	-	55	49.180	ENSCGRG00000003408	Aff3	61	50.000	Cricetulus_griseus_crigri
ENSACLG00000002905	-	50	43.902	ENSCSEG00000017002	aff4	52	43.200	Cynoglossus_semilaevis
ENSACLG00000002905	-	98	50.089	ENSCVAG00000015626	-	99	50.749	Cyprinodon_variegatus
ENSACLG00000002905	-	59	38.462	ENSDARG00000052242	aff2	50	45.560	Danio_rerio
ENSACLG00000002905	-	62	40.260	ENSETEG00000014905	AFF1	66	33.245	Echinops_telfairi
ENSACLG00000002905	-	60	62.903	ENSEASG00005012760	AFF1	52	62.903	Equus_asinus_asinus
ENSACLG00000002905	-	50	43.846	ENSEASG00005018275	AFF3	51	43.846	Equus_asinus_asinus
ENSACLG00000002905	-	57	47.541	ENSECAG00000006249	AFF3	55	48.333	Equus_caballus
ENSACLG00000002905	-	64	62.903	ENSECAG00000003619	AFF1	66	43.137	Equus_caballus
ENSACLG00000002905	-	99	41.736	ENSELUG00000019953	-	99	42.023	Esox_lucius
ENSACLG00000002905	-	61	61.667	ENSFDAG00000018846	AFF1	70	33.678	Fukomys_damarensis
ENSACLG00000002905	-	78	46.580	ENSFHEG00000003521	-	100	46.464	Fundulus_heteroclitus
ENSACLG00000002905	-	50	43.089	ENSGMOG00000008803	aff4	69	36.809	Gadus_morhua
ENSACLG00000002905	-	54	45.000	ENSGALG00000009168	AFF2	63	32.708	Gallus_gallus
ENSACLG00000002905	-	99	52.748	ENSGACG00000016333	-	99	58.933	Gasterosteus_aculeatus
ENSACLG00000002905	-	99	99.113	ENSHBUG00000005828	-	99	99.113	Haplochromis_burtoni
ENSACLG00000002905	-	99	44.857	ENSHCOG00000000539	-	99	44.310	Hippocampus_comes
ENSACLG00000002905	-	50	57.692	ENSHCOG00000004812	aff2	63	57.692	Hippocampus_comes
ENSACLG00000002905	-	51	35.207	ENSIPUG00000015259	-	73	38.546	Ictalurus_punctatus
ENSACLG00000002905	-	58	62.903	ENSSTOG00000006530	AFF1	52	62.903	Ictidomys_tridecemlineatus
ENSACLG00000002905	-	56	50.000	ENSSTOG00000012140	AFF3	57	50.000	Ictidomys_tridecemlineatus
ENSACLG00000002905	-	55	45.902	ENSJJAG00000013155	Aff3	61	46.774	Jaculus_jaculus
ENSACLG00000002905	-	99	54.919	ENSKMAG00000013113	-	99	54.693	Kryptolebias_marmoratus
ENSACLG00000002905	-	99	57.059	ENSLBEG00000016928	-	100	57.059	Labrus_bergylta
ENSACLG00000002905	-	84	36.719	ENSLOCG00000004025	AFF1	70	46.861	Lepisosteus_oculatus
ENSACLG00000002905	-	64	35.849	ENSMFAG00000037700	AFF1	72	34.925	Macaca_fascicularis
ENSACLG00000002905	-	64	36.052	ENSMMUG00000014076	AFF1	86	34.545	Macaca_mulatta
ENSACLG00000002905	-	64	36.593	ENSMNEG00000031536	AFF1	70	36.473	Macaca_nemestrina
ENSACLG00000002905	-	64	37.224	ENSMLEG00000039099	AFF1	70	36.473	Mandrillus_leucophaeus
ENSACLG00000002905	-	99	60.154	ENSMAMG00000016189	-	98	60.959	Mastacembelus_armatus
ENSACLG00000002905	-	100	99.824	ENSMZEG00005020442	-	100	99.824	Maylandia_zebra
ENSACLG00000002905	-	59	37.255	ENSMOCG00000017389	Aff1	51	41.870	Microtus_ochrogaster
ENSACLG00000002905	-	99	58.655	ENSMALG00000002436	-	99	58.067	Monopterus_albus
ENSACLG00000002905	-	55	47.541	MGP_CAROLIEiJ_G0014063	Aff3	53	48.333	Mus_caroli
ENSACLG00000002905	-	57	56.667	MGP_CAROLIEiJ_G0027469	Aff1	52	56.667	Mus_caroli
ENSACLG00000002905	-	55	47.541	ENSMUSG00000037138	Aff3	53	48.333	Mus_musculus
ENSACLG00000002905	-	63	58.333	MGP_PahariEiJ_G0017247	Aff1	52	58.333	Mus_pahari
ENSACLG00000002905	-	55	47.541	MGP_PahariEiJ_G0027310	Aff3	53	48.333	Mus_pahari
ENSACLG00000002905	-	55	48.387	MGP_SPRETEiJ_G0014867	Aff3	53	48.333	Mus_spretus
ENSACLG00000002905	-	61	38.188	ENSMPUG00000002270	AFF1	71	36.449	Mustela_putorius_furo
ENSACLG00000002905	-	55	61.290	ENSMLUG00000000293	AFF1	53	41.393	Myotis_lucifugus
ENSACLG00000002905	-	55	48.333	ENSNGAG00000002408	Aff3	53	48.333	Nannospalax_galili
ENSACLG00000002905	-	99	86.869	ENSONIG00000007636	-	99	88.047	Oreochromis_niloticus
ENSACLG00000002905	-	57	51.163	ENSOANG00000013624	AFF1	80	37.000	Ornithorhynchus_anatinus
ENSACLG00000002905	-	55	48.387	ENSOCUG00000009532	AFF3	52	48.387	Oryctolagus_cuniculus
ENSACLG00000002905	-	58	62.903	ENSOCUG00000002105	AFF1	50	62.903	Oryctolagus_cuniculus
ENSACLG00000002905	-	73	59.756	ENSORLG00000006428	-	99	59.756	Oryzias_latipes
ENSACLG00000002905	-	87	59.756	ENSORLG00020003991	-	99	59.756	Oryzias_latipes_hni
ENSACLG00000002905	-	87	59.756	ENSORLG00015009287	-	99	59.756	Oryzias_latipes_hsok
ENSACLG00000002905	-	85	61.798	ENSOMEG00000005799	-	100	60.440	Oryzias_melastigma
ENSACLG00000002905	-	65	37.309	ENSOGAG00000009622	-	71	36.650	Otolemur_garnettii
ENSACLG00000002905	-	61	38.390	ENSOARG00000004522	AFF1	71	36.300	Ovis_aries
ENSACLG00000002905	-	71	35.366	ENSPPRG00000023590	AFF1	69	35.652	Panthera_pardus
ENSACLG00000002905	-	71	35.366	ENSPTIG00000011838	AFF1	89	35.366	Panthera_tigris_altaica
ENSACLG00000002905	-	60	35.052	ENSPANG00000016722	AFF1	67	33.957	Papio_anubis
ENSACLG00000002905	-	72	36.069	ENSPKIG00000024325	AFF4	69	36.717	Paramormyrops_kingsleyae
ENSACLG00000002905	-	91	56.274	ENSPKIG00000007777	-	55	57.143	Paramormyrops_kingsleyae
ENSACLG00000002905	-	55	47.541	ENSPEMG00000014802	Aff3	61	48.387	Peromyscus_maniculatus_bairdii
ENSACLG00000002905	-	99	50.901	ENSPFOG00000004581	-	99	50.345	Poecilia_formosa
ENSACLG00000002905	-	94	49.638	ENSPLAG00000012910	-	99	48.863	Poecilia_latipinna
ENSACLG00000002905	-	65	48.489	ENSPMEG00000020100	-	93	47.500	Poecilia_mexicana
ENSACLG00000002905	-	99	51.588	ENSPREG00000003514	-	99	51.034	Poecilia_reticulata
ENSACLG00000002905	-	76	34.437	ENSPPYG00000014910	AFF1	69	35.214	Pongo_abelii
ENSACLG00000002905	-	61	47.368	ENSPVAG00000014455	AFF1	51	48.352	Pteropus_vampyrus
ENSACLG00000002905	-	55	47.541	ENSRNOG00000018830	Aff3	50	48.333	Rattus_norvegicus
ENSACLG00000002905	-	64	36.285	ENSRBIG00000032242	AFF1	70	37.500	Rhinopithecus_bieti
ENSACLG00000002905	-	64	36.285	ENSRROG00000045716	AFF1	70	37.264	Rhinopithecus_roxellana
ENSACLG00000002905	-	65	36.875	ENSSBOG00000035401	AFF1	56	43.083	Saimiri_boliviensis_boliviensis
ENSACLG00000002905	-	99	57.586	ENSSMAG00000007062	-	99	57.754	Scophthalmus_maximus
ENSACLG00000002905	-	60	59.467	ENSSDUG00000023775	-	97	60.253	Seriola_dumerili
ENSACLG00000002905	-	99	63.492	ENSSLDG00000006836	-	99	63.743	Seriola_lalandi_dorsalis
ENSACLG00000002905	-	96	66.028	ENSSPAG00000003972	-	97	66.115	Stegastes_partitus
ENSACLG00000002905	-	50	43.200	ENSTRUG00000008087	aff4	55	44.781	Takifugu_rubripes
ENSACLG00000002905	-	99	50.378	ENSTRUG00000014005	-	99	49.958	Takifugu_rubripes
ENSACLG00000002905	-	99	42.971	ENSTNIG00000007537	-	69	39.016	Tetraodon_nigroviridis
ENSACLG00000002905	-	63	38.079	ENSTBEG00000007536	AFF1	70	35.835	Tupaia_belangeri
ENSACLG00000002905	-	61	38.080	ENSTTRG00000005595	AFF1	70	36.298	Tursiops_truncatus
ENSACLG00000002905	-	58	63.333	ENSUMAG00000025433	AFF1	80	34.343	Ursus_maritimus
ENSACLG00000002905	-	72	36.047	ENSVVUG00000009263	AFF1	69	36.190	Vulpes_vulpes
ENSACLG00000002905	-	55	41.699	ENSXETG00000019630	aff2	50	41.245	Xenopus_tropicalis
ENSACLG00000002905	-	50	43.200	ENSXMAG00000001642	aff4	55	45.660	Xiphophorus_maculatus
ENSACLG00000002905	-	99	51.372	ENSXMAG00000004657	-	99	51.458	Xiphophorus_maculatus