EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000003012 (Gene tree)
Gene ID: 113022100
Gene Symbol: chd5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 21080 bases
Position: chr5:10379062-10400141
Accession: ZDB-GENE-120314-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000004606	ResIII	PF04851.15	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000004697	-	5325	-	ENSACLP00000004606	1774 (aa)	-	-

Gene Model

Click here to download ENSACLG00000003012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000003012's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000003012	chd5	96	65.127	ENSACLG00000015837	chd4a	85	68.142
ENSACLG00000003012	chd5	96	66.463	ENSACLG00000009222	chd3	95	66.853
ENSACLG00000003012	chd5	94	67.185	ENSACLG00000024468	-	85	69.987

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000003012	chd5	96	74.458	ENSG00000116254	CHD5	89	84.105	Homo_sapiens
ENSACLG00000003012	chd5	96	73.499	ENSAMEG00000009880	CHD5	95	74.144	Ailuropoda_melanoleuca
ENSACLG00000003012	chd5	99	87.480	ENSACIG00000012582	chd5	99	87.452	Amphilophus_citrinellus
ENSACLG00000003012	chd5	99	86.574	ENSAOCG00000020356	chd5	93	86.628	Amphiprion_ocellaris
ENSACLG00000003012	chd5	88	77.080	ENSAPLG00000015475	CHD5	95	68.470	Anas_platyrhynchos
ENSACLG00000003012	chd5	99	71.616	ENSACAG00000002441	CHD5	93	72.722	Anolis_carolinensis
ENSACLG00000003012	chd5	75	80.956	ENSANAG00000001078	CHD5	91	74.766	Aotus_nancymaae
ENSACLG00000003012	chd5	94	80.451	ENSAMXG00000008921	chd5	99	80.856	Astyanax_mexicanus
ENSACLG00000003012	chd5	96	73.330	ENSBTAG00000040477	CHD5	99	74.686	Bos_taurus
ENSACLG00000003012	chd5	96	74.552	ENSCJAG00000000101	CHD5	94	75.041	Callithrix_jacchus
ENSACLG00000003012	chd5	96	74.467	ENSCAFG00000019545	CHD5	99	74.576	Canis_familiaris
ENSACLG00000003012	chd5	96	75.801	ENSCAFG00020008689	CHD5	91	75.856	Canis_lupus_dingo
ENSACLG00000003012	chd5	91	80.332	ENSCHIG00000015027	CHD5	91	74.959	Capra_hircus
ENSACLG00000003012	chd5	91	77.855	ENSTSYG00000033991	CHD5	94	72.315	Carlito_syrichta
ENSACLG00000003012	chd5	96	75.896	ENSCAPG00000009294	CHD5	95	75.978	Cavia_aperea
ENSACLG00000003012	chd5	96	75.896	ENSCPOG00000025080	CHD5	95	75.978	Cavia_porcellus
ENSACLG00000003012	chd5	96	74.444	ENSCCAG00000024756	CHD5	94	74.973	Cebus_capucinus
ENSACLG00000003012	chd5	96	74.457	ENSCATG00000043011	CHD5	94	75.177	Cercocebus_atys
ENSACLG00000003012	chd5	96	75.567	ENSCLAG00000010589	CHD5	95	76.227	Chinchilla_lanigera
ENSACLG00000003012	chd5	96	74.403	ENSCSAG00000000733	CHD5	94	75.054	Chlorocebus_sabaeus
ENSACLG00000003012	chd5	96	73.979	ENSCPBG00000019363	CHD5	99	74.197	Chrysemys_picta_bellii
ENSACLG00000003012	chd5	96	74.526	ENSCANG00000032302	CHD5	94	75.000	Colobus_angolensis_palliatus
ENSACLG00000003012	chd5	58	78.699	ENSCGRG00001011042	Chd5	95	79.643	Cricetulus_griseus_chok1gshd
ENSACLG00000003012	chd5	99	75.174	ENSCGRG00000011341	Chd5	97	75.715	Cricetulus_griseus_crigri
ENSACLG00000003012	chd5	94	63.266	ENSDARG00000025789	chd4b	83	67.440	Danio_rerio
ENSACLG00000003012	chd5	99	79.594	ENSDARG00000105083	chd5	97	80.428	Danio_rerio
ENSACLG00000003012	chd5	91	78.675	ENSDNOG00000046342	CHD5	89	78.718	Dasypus_novemcinctus
ENSACLG00000003012	chd5	96	75.551	ENSDORG00000005923	Chd5	95	75.881	Dipodomys_ordii
ENSACLG00000003012	chd5	96	75.014	ENSEASG00005021464	CHD5	95	74.074	Equus_asinus_asinus
ENSACLG00000003012	chd5	96	74.806	ENSECAG00000025043	CHD5	96	81.577	Equus_caballus
ENSACLG00000003012	chd5	69	79.539	ENSEEUG00000002772	CHD5	65	79.539	Erinaceus_europaeus
ENSACLG00000003012	chd5	99	80.606	ENSELUG00000010742	chd5	98	80.960	Esox_lucius
ENSACLG00000003012	chd5	96	74.634	ENSFCAG00000006319	CHD5	94	75.095	Felis_catus
ENSACLG00000003012	chd5	96	73.085	ENSFALG00000009740	CHD5	94	73.036	Ficedula_albicollis
ENSACLG00000003012	chd5	96	75.342	ENSFDAG00000012881	CHD5	92	75.356	Fukomys_damarensis
ENSACLG00000003012	chd5	96	73.798	ENSGALG00000000747	CHD5	94	74.174	Gallus_gallus
ENSACLG00000003012	chd5	62	89.628	ENSGACG00000004389	chd5	97	89.991	Gasterosteus_aculeatus
ENSACLG00000003012	chd5	97	73.730	ENSGAGG00000001590	CHD5	97	73.811	Gopherus_agassizii
ENSACLG00000003012	chd5	96	74.512	ENSGGOG00000000708	CHD5	95	75.217	Gorilla_gorilla
ENSACLG00000003012	chd5	99	94.642	ENSHBUG00000013453	chd5	100	94.642	Haplochromis_burtoni
ENSACLG00000003012	chd5	96	75.590	ENSHGLG00000018184	CHD5	97	74.352	Heterocephalus_glaber_female
ENSACLG00000003012	chd5	96	69.227	ENSHGLG00100013261	CHD5	92	68.915	Heterocephalus_glaber_male
ENSACLG00000003012	chd5	96	80.979	ENSIPUG00000005446	chd5	98	80.144	Ictalurus_punctatus
ENSACLG00000003012	chd5	96	75.275	ENSSTOG00000002778	CHD5	95	76.073	Ictidomys_tridecemlineatus
ENSACLG00000003012	chd5	99	75.013	ENSJJAG00000019072	Chd5	96	75.605	Jaculus_jaculus
ENSACLG00000003012	chd5	96	79.282	ENSLOCG00000004944	chd5	93	78.349	Lepisosteus_oculatus
ENSACLG00000003012	chd5	96	74.972	ENSLAFG00000006348	CHD5	100	74.972	Loxodonta_africana
ENSACLG00000003012	chd5	96	74.403	ENSMFAG00000033993	CHD5	99	75.109	Macaca_fascicularis
ENSACLG00000003012	chd5	96	76.220	ENSMMUG00000016838	CHD5	93	76.565	Macaca_mulatta
ENSACLG00000003012	chd5	96	74.403	ENSMNEG00000040044	CHD5	94	75.054	Macaca_nemestrina
ENSACLG00000003012	chd5	96	73.727	ENSMLEG00000039166	CHD5	95	74.580	Mandrillus_leucophaeus
ENSACLG00000003012	chd5	99	94.481	ENSMZEG00005000841	chd5	100	94.481	Maylandia_zebra
ENSACLG00000003012	chd5	96	73.571	ENSMGAG00000001055	CHD5	94	74.028	Meleagris_gallopavo
ENSACLG00000003012	chd5	96	76.038	ENSMICG00000017862	CHD5	93	76.093	Microcebus_murinus
ENSACLG00000003012	chd5	99	74.207	ENSMOCG00000011049	Chd5	95	75.527	Microtus_ochrogaster
ENSACLG00000003012	chd5	76	69.962	ENSMODG00000006294	CHD5	65	81.731	Monodelphis_domestica
ENSACLG00000003012	chd5	99	85.806	ENSMALG00000002831	chd5	98	85.159	Monopterus_albus
ENSACLG00000003012	chd5	99	73.957	MGP_CAROLIEiJ_G0026857	Chd5	96	74.468	Mus_caroli
ENSACLG00000003012	chd5	96	75.734	ENSMUSG00000005045	Chd5	95	75.230	Mus_musculus
ENSACLG00000003012	chd5	96	75.719	MGP_PahariEiJ_G0029205	Chd5	95	75.649	Mus_pahari
ENSACLG00000003012	chd5	96	75.734	MGP_SPRETEiJ_G0027850	Chd5	95	75.649	Mus_spretus
ENSACLG00000003012	chd5	93	80.498	ENSMPUG00000007122	CHD5	86	80.844	Mustela_putorius_furo
ENSACLG00000003012	chd5	96	74.225	ENSNGAG00000019812	Chd5	91	74.337	Nannospalax_galili
ENSACLG00000003012	chd5	96	73.563	ENSNLEG00000010320	CHD5	95	74.137	Nomascus_leucogenys
ENSACLG00000003012	chd5	84	70.394	ENSOPRG00000004304	CHD5	80	70.601	Ochotona_princeps
ENSACLG00000003012	chd5	96	75.799	ENSODEG00000010262	CHD5	95	75.883	Octodon_degus
ENSACLG00000003012	chd5	99	86.862	ENSONIG00000000619	chd5	95	86.862	Oreochromis_niloticus
ENSACLG00000003012	chd5	97	63.543	ENSOANG00000001819	CHD5	96	63.093	Ornithorhynchus_anatinus
ENSACLG00000003012	chd5	97	74.142	ENSOGAG00000005703	CHD5	94	74.621	Otolemur_garnettii
ENSACLG00000003012	chd5	78	78.976	ENSOARG00000013425	CHD5	92	73.891	Ovis_aries
ENSACLG00000003012	chd5	96	74.363	ENSPPAG00000034048	CHD5	95	75.122	Pan_paniscus
ENSACLG00000003012	chd5	96	74.146	ENSPPRG00000009453	CHD5	93	74.593	Panthera_pardus
ENSACLG00000003012	chd5	96	70.086	ENSPTIG00000013926	CHD5	95	70.458	Panthera_tigris_altaica
ENSACLG00000003012	chd5	96	74.363	ENSPTRG00000000075	CHD5	94	75.122	Pan_troglodytes
ENSACLG00000003012	chd5	96	74.403	ENSPANG00000006765	CHD5	94	75.054	Papio_anubis
ENSACLG00000003012	chd5	94	81.708	ENSPKIG00000004282	chd5	95	81.420	Paramormyrops_kingsleyae
ENSACLG00000003012	chd5	96	69.881	ENSPSIG00000006414	CHD5	97	69.989	Pelodiscus_sinensis
ENSACLG00000003012	chd5	66	80.616	ENSPEMG00000014799	Chd5	96	80.337	Peromyscus_maniculatus_bairdii
ENSACLG00000003012	chd5	96	75.662	ENSPCIG00000028310	CHD5	91	75.783	Phascolarctos_cinereus
ENSACLG00000003012	chd5	99	83.755	ENSPLAG00000005343	chd5	99	83.951	Poecilia_latipinna
ENSACLG00000003012	chd5	96	76.053	ENSPPYG00000001952	CHD5	95	76.259	Pongo_abelii
ENSACLG00000003012	chd5	96	74.824	ENSPCOG00000022930	CHD5	94	74.797	Propithecus_coquereli
ENSACLG00000003012	chd5	100	88.635	ENSPNYG00000003183	chd5	99	88.635	Pundamilia_nyererei
ENSACLG00000003012	chd5	99	73.474	ENSRNOG00000011268	Chd5	96	74.296	Rattus_norvegicus
ENSACLG00000003012	chd5	91	80.288	ENSRBIG00000032140	CHD5	94	80.830	Rhinopithecus_bieti
ENSACLG00000003012	chd5	96	74.187	ENSRROG00000041146	CHD5	94	74.986	Rhinopithecus_roxellana
ENSACLG00000003012	chd5	96	71.662	ENSSBOG00000001955	CHD5	99	76.131	Saimiri_boliviensis_boliviensis
ENSACLG00000003012	chd5	96	69.438	ENSSHAG00000018641	CHD5	97	69.276	Sarcophilus_harrisii
ENSACLG00000003012	chd5	96	88.786	ENSSFOG00015006296	chd5	89	88.080	Scleropages_formosus
ENSACLG00000003012	chd5	99	85.845	ENSSDUG00000017526	chd5	99	87.415	Seriola_dumerili
ENSACLG00000003012	chd5	99	68.844	ENSSPUG00000010622	CHD5	89	87.179	Sphenodon_punctatus
ENSACLG00000003012	chd5	90	80.836	ENSSSCG00000003366	CHD5	99	74.932	Sus_scrofa
ENSACLG00000003012	chd5	77	77.817	ENSTGUG00000002634	-	97	71.851	Taeniopygia_guttata
ENSACLG00000003012	chd5	55	87.771	ENSTNIG00000004346	chd5	99	87.660	Tetraodon_nigroviridis
ENSACLG00000003012	chd5	96	74.794	ENSTTRG00000010468	CHD5	94	74.904	Tursiops_truncatus
ENSACLG00000003012	chd5	96	76.051	ENSUAMG00000024509	CHD5	94	76.428	Ursus_americanus
ENSACLG00000003012	chd5	96	71.776	ENSUMAG00000024173	CHD5	95	72.031	Ursus_maritimus
ENSACLG00000003012	chd5	96	74.780	ENSVVUG00000026480	CHD5	95	75.399	Vulpes_vulpes
ENSACLG00000003012	chd5	99	71.506	ENSXETG00000002904	chd5	97	72.145	Xenopus_tropicalis
ENSACLG00000003012	chd5	62	91.429	ENSXCOG00000014202	chd5	98	91.429	Xiphophorus_couchianus