EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000003017 (Gene tree)
Gene ID: 113027787
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 34492 bases
Position: chr8:25734441-25768932
Accession: 113027787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000004508	KH_1	PF00013.29	2.1e-18	1	1
ENSACLP00000004479	KH_1	PF00013.29	2.4e-18	1	1
ENSACLP00000004479	TUDOR	PF00567.24	2.2e-26	1	1
ENSACLP00000004508	TUDOR	PF00567.24	2.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000004599	-	1959	-	ENSACLP00000004508	556 (aa)	XP_026033384	UPI00032A3252
ENSACLT00000004570	-	1950	-	ENSACLP00000004479	553 (aa)	XP_026033385	UPI000329AD46

Gene Model

Click here to download ENSACLG00000003017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000003017's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000003017	tdrkh	100	77.599	ENSAPOG00000012653	tdrkh	100	78.136	Acanthochromis_polyacanthus
ENSACLG00000003017	tdrkh	97	86.916	ENSACIG00000010318	tdrkh	98	86.916	Amphilophus_citrinellus
ENSACLG00000003017	tdrkh	100	78.674	ENSAOCG00000020623	tdrkh	100	79.211	Amphiprion_ocellaris
ENSACLG00000003017	tdrkh	100	79.032	ENSAPEG00000018388	tdrkh	100	79.570	Amphiprion_percula
ENSACLG00000003017	tdrkh	100	75.451	ENSATEG00000023809	tdrkh	100	75.451	Anabas_testudineus
ENSACLG00000003017	tdrkh	99	59.928	ENSAMXG00000011664	tdrkh	94	59.928	Astyanax_mexicanus
ENSACLG00000003017	tdrkh	100	66.667	ENSCSEG00000002894	tdrkh	99	66.667	Cynoglossus_semilaevis
ENSACLG00000003017	tdrkh	62	80.392	ENSCVAG00000020347	tdrkh	78	80.392	Cyprinodon_variegatus
ENSACLG00000003017	tdrkh	99	59.099	ENSDARG00000053474	tdrkh	94	59.099	Danio_rerio
ENSACLG00000003017	tdrkh	100	63.894	ENSELUG00000024537	tdrkh	94	63.894	Esox_lucius
ENSACLG00000003017	tdrkh	100	72.694	ENSFHEG00000003544	tdrkh	100	72.694	Fundulus_heteroclitus
ENSACLG00000003017	tdrkh	100	61.939	ENSGMOG00000009304	tdrkh	94	61.939	Gadus_morhua
ENSACLG00000003017	tdrkh	100	69.439	ENSGAFG00000010754	tdrkh	100	69.439	Gambusia_affinis
ENSACLG00000003017	tdrkh	100	69.713	ENSGACG00000015258	tdrkh	94	69.534	Gasterosteus_aculeatus
ENSACLG00000003017	tdrkh	100	98.734	ENSHBUG00000017609	tdrkh	100	98.734	Haplochromis_burtoni
ENSACLG00000003017	tdrkh	99	60.180	ENSIPUG00000009673	tdrkh	99	60.180	Ictalurus_punctatus
ENSACLG00000003017	tdrkh	100	72.694	ENSKMAG00000016638	tdrkh	93	72.875	Kryptolebias_marmoratus
ENSACLG00000003017	tdrkh	100	74.595	ENSLBEG00000027323	tdrkh	97	74.595	Labrus_bergylta
ENSACLG00000003017	tdrkh	99	50.624	ENSLOCG00000011381	tdrkh	99	50.624	Lepisosteus_oculatus
ENSACLG00000003017	tdrkh	100	74.549	ENSMAMG00000020343	tdrkh	100	74.549	Mastacembelus_armatus
ENSACLG00000003017	tdrkh	100	100.000	ENSMZEG00005006755	tdrkh	100	100.000	Maylandia_zebra
ENSACLG00000003017	tdrkh	97	70.577	ENSMMOG00000020663	tdrkh	90	70.577	Mola_mola
ENSACLG00000003017	tdrkh	100	72.302	ENSMALG00000015401	tdrkh	100	72.302	Monopterus_albus
ENSACLG00000003017	tdrkh	100	94.394	ENSNBRG00000023815	tdrkh	100	94.394	Neolamprologus_brichardi
ENSACLG00000003017	tdrkh	100	69.369	ENSORLG00000029204	tdrkh	99	69.369	Oryzias_latipes
ENSACLG00000003017	tdrkh	96	67.857	ENSORLG00020016168	tdrkh	99	67.857	Oryzias_latipes_hni
ENSACLG00000003017	tdrkh	100	65.642	ENSORLG00015014094	tdrkh	99	65.642	Oryzias_latipes_hsok
ENSACLG00000003017	tdrkh	100	69.550	ENSOMEG00000015063	tdrkh	92	69.550	Oryzias_melastigma
ENSACLG00000003017	tdrkh	100	57.932	ENSPKIG00000017597	tdrkh	100	57.932	Paramormyrops_kingsleyae
ENSACLG00000003017	tdrkh	100	65.364	ENSPMGG00000019362	tdrkh	100	65.364	Periophthalmus_magnuspinnatus
ENSACLG00000003017	tdrkh	100	69.078	ENSPFOG00000013032	tdrkh	94	69.078	Poecilia_formosa
ENSACLG00000003017	tdrkh	100	69.259	ENSPLAG00000004193	tdrkh	100	69.259	Poecilia_latipinna
ENSACLG00000003017	tdrkh	100	69.078	ENSPMEG00000016502	tdrkh	100	69.078	Poecilia_mexicana
ENSACLG00000003017	tdrkh	100	66.727	ENSPREG00000004213	tdrkh	94	66.727	Poecilia_reticulata
ENSACLG00000003017	tdrkh	97	99.065	ENSPNYG00000022818	tdrkh	97	99.065	Pundamilia_nyererei
ENSACLG00000003017	tdrkh	99	59.928	ENSPNAG00000008783	tdrkh	94	59.928	Pygocentrus_nattereri
ENSACLG00000003017	tdrkh	100	55.635	ENSSFOG00015001048	tdrkh	100	55.635	Scleropages_formosus
ENSACLG00000003017	tdrkh	100	73.656	ENSSMAG00000001532	tdrkh	100	73.656	Scophthalmus_maximus
ENSACLG00000003017	tdrkh	100	74.113	ENSSDUG00000013393	tdrkh	100	74.113	Seriola_dumerili
ENSACLG00000003017	tdrkh	100	74.823	ENSSLDG00000017418	tdrkh	100	74.823	Seriola_lalandi_dorsalis
ENSACLG00000003017	tdrkh	100	79.211	ENSSPAG00000006435	tdrkh	95	79.211	Stegastes_partitus
ENSACLG00000003017	tdrkh	97	68.224	ENSTRUG00000006644	tdrkh	97	68.224	Takifugu_rubripes
ENSACLG00000003017	tdrkh	99	66.847	ENSTNIG00000003157	tdrkh	99	66.847	Tetraodon_nigroviridis
ENSACLG00000003017	tdrkh	88	79.452	ENSXCOG00000016972	tdrkh	98	78.182	Xiphophorus_couchianus
ENSACLG00000003017	tdrkh	100	66.727	ENSXMAG00000014756	tdrkh	100	66.727	Xiphophorus_maculatus