EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000003019 (Gene tree)
Gene ID: 113018668
Gene Symbol: -
Alias: -
Full Name: tetratricopeptide repeat protein 31-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 12042 bases
Position: chr3:15027457-15039498
Accession: 113018668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000004491	RRM_1	PF00076.22	3.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000004582	-	5328	-	ENSACLP00000004491	609 (aa)	XP_026017751	UPI000E420A3E

Gene Model

Click here to download ENSACLG00000003019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000003019's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000003019	-	74	36.920	ENSACLG00000014192	si:dkey-33c12.4	54	42.618
ENSACLG00000003019	-	51	36.410	ENSACLG00000012346	-	50	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000003019	-	100	64.000	ENSAPOG00000022403	-	95	64.000	Acanthochromis_polyacanthus
ENSACLG00000003019	-	61	38.028	ENSAPOG00000001034	-	81	38.028	Acanthochromis_polyacanthus
ENSACLG00000003019	-	100	64.762	ENSAOCG00000000431	-	95	64.762	Amphiprion_ocellaris
ENSACLG00000003019	-	100	65.238	ENSAPEG00000023603	-	95	65.238	Amphiprion_percula
ENSACLG00000003019	-	100	62.184	ENSATEG00000018302	-	95	63.175	Anabas_testudineus
ENSACLG00000003019	-	79	43.687	ENSAMXG00000010871	si:dkey-33c12.4	59	47.596	Astyanax_mexicanus
ENSACLG00000003019	-	99	51.987	ENSCSEG00000002755	-	95	51.414	Cynoglossus_semilaevis
ENSACLG00000003019	-	100	57.006	ENSCVAG00000004187	-	100	55.626	Cyprinodon_variegatus
ENSACLG00000003019	-	84	43.846	ENSDARG00000057890	si:dkey-33c12.4	76	44.234	Danio_rerio
ENSACLG00000003019	-	95	43.023	ENSELUG00000001633	-	82	44.248	Esox_lucius
ENSACLG00000003019	-	84	41.296	ENSELUG00000002009	si:dkey-33c12.4	65	63.971	Esox_lucius
ENSACLG00000003019	-	94	55.857	ENSFHEG00000009983	-	96	55.178	Fundulus_heteroclitus
ENSACLG00000003019	-	100	59.649	ENSGAFG00000016594	-	95	58.373	Gambusia_affinis
ENSACLG00000003019	-	56	38.308	ENSGACG00000007620	zgc:123010	72	37.313	Gasterosteus_aculeatus
ENSACLG00000003019	-	50	48.936	ENSGACG00000004936	-	78	48.936	Gasterosteus_aculeatus
ENSACLG00000003019	-	51	36.410	ENSHBUG00000016720	-	50	40.000	Haplochromis_burtoni
ENSACLG00000003019	-	74	36.998	ENSHBUG00000010735	si:dkey-33c12.4	51	42.898	Haplochromis_burtoni
ENSACLG00000003019	-	83	45.489	ENSIPUG00000005998	si:dkey-33c12.4	76	45.279	Ictalurus_punctatus
ENSACLG00000003019	-	99	60.905	ENSKMAG00000006468	-	97	60.709	Kryptolebias_marmoratus
ENSACLG00000003019	-	54	41.641	ENSKMAG00000016610	si:dkey-33c12.4	52	40.000	Kryptolebias_marmoratus
ENSACLG00000003019	-	60	38.211	ENSLBEG00000017203	-	52	39.385	Labrus_bergylta
ENSACLG00000003019	-	60	38.544	ENSLBEG00000021088	-	50	39.385	Labrus_bergylta
ENSACLG00000003019	-	100	54.516	ENSLBEG00000028046	-	95	51.212	Labrus_bergylta
ENSACLG00000003019	-	75	39.066	ENSLACG00000004602	-	51	53.704	Latimeria_chalumnae
ENSACLG00000003019	-	84	44.742	ENSLOCG00000001861	-	75	45.889	Lepisosteus_oculatus
ENSACLG00000003019	-	99	56.472	ENSMAMG00000004311	-	99	53.270	Mastacembelus_armatus
ENSACLG00000003019	-	66	41.505	ENSMAMG00000000111	si:dkey-33c12.4	51	44.476	Mastacembelus_armatus
ENSACLG00000003019	-	51	36.410	ENSMZEG00005014740	-	64	40.000	Maylandia_zebra
ENSACLG00000003019	-	74	36.709	ENSMZEG00005014276	si:dkey-33c12.4	51	43.182	Maylandia_zebra
ENSACLG00000003019	-	100	98.030	ENSMZEG00005000585	-	100	98.030	Maylandia_zebra
ENSACLG00000003019	-	76	37.344	ENSMALG00000002265	si:dkey-33c12.4	50	44.012	Monopterus_albus
ENSACLG00000003019	-	100	61.173	ENSMALG00000003167	-	95	61.173	Monopterus_albus
ENSACLG00000003019	-	100	93.333	ENSONIG00000007538	-	97	97.183	Oreochromis_niloticus
ENSACLG00000003019	-	99	58.173	ENSORLG00000030385	-	95	56.390	Oryzias_latipes
ENSACLG00000003019	-	99	58.013	ENSORLG00015008400	-	95	56.390	Oryzias_latipes_hsok
ENSACLG00000003019	-	99	57.870	ENSOMEG00000009428	-	95	56.439	Oryzias_melastigma
ENSACLG00000003019	-	67	33.546	ENSOMEG00000003408	zgc:123010	50	38.947	Oryzias_melastigma
ENSACLG00000003019	-	83	46.304	ENSPKIG00000011819	-	71	46.498	Paramormyrops_kingsleyae
ENSACLG00000003019	-	56	36.493	ENSPKIG00000015521	zgc:123010	54	43.056	Paramormyrops_kingsleyae
ENSACLG00000003019	-	77	64.211	ENSPFOG00000017092	-	96	62.947	Poecilia_formosa
ENSACLG00000003019	-	99	59.520	ENSPMEG00000009905	-	97	59.200	Poecilia_mexicana
ENSACLG00000003019	-	99	59.680	ENSPREG00000016861	-	97	58.720	Poecilia_reticulata
ENSACLG00000003019	-	52	32.075	ENSPNYG00000023304	-	50	43.478	Pundamilia_nyererei
ENSACLG00000003019	-	74	36.709	ENSPNYG00000018262	si:dkey-33c12.4	51	43.182	Pundamilia_nyererei
ENSACLG00000003019	-	100	98.030	ENSPNYG00000001047	-	100	98.030	Pundamilia_nyererei
ENSACLG00000003019	-	66	47.619	ENSPNAG00000018386	si:dkey-33c12.4	78	43.785	Pygocentrus_nattereri
ENSACLG00000003019	-	54	36.620	ENSPNAG00000007579	zgc:123010	50	41.081	Pygocentrus_nattereri
ENSACLG00000003019	-	68	45.606	ENSSFOG00015009199	-	61	45.521	Scleropages_formosus
ENSACLG00000003019	-	65	46.985	ENSSFOG00015005186	-	57	46.766	Scleropages_formosus
ENSACLG00000003019	-	68	31.902	ENSSFOG00015021394	zgc:123010	54	39.512	Scleropages_formosus
ENSACLG00000003019	-	99	60.800	ENSSMAG00000010960	-	95	59.520	Scophthalmus_maximus
ENSACLG00000003019	-	54	36.620	ENSSMAG00000002904	zgc:123010	50	42.286	Scophthalmus_maximus
ENSACLG00000003019	-	85	36.015	ENSSMAG00000008147	si:dkey-33c12.4	51	40.608	Scophthalmus_maximus
ENSACLG00000003019	-	99	64.058	ENSSDUG00000010976	-	99	63.099	Seriola_dumerili
ENSACLG00000003019	-	74	40.336	ENSSDUG00000003213	si:dkey-33c12.4	54	43.143	Seriola_dumerili
ENSACLG00000003019	-	96	64.521	ENSSLDG00000012846	-	99	63.201	Seriola_lalandi_dorsalis
ENSACLG00000003019	-	66	42.584	ENSSLDG00000009448	si:dkey-33c12.4	50	43.143	Seriola_lalandi_dorsalis
ENSACLG00000003019	-	100	63.593	ENSSPAG00000004843	-	95	63.593	Stegastes_partitus
ENSACLG00000003019	-	99	43.902	ENSTRUG00000000057	-	95	41.042	Takifugu_rubripes
ENSACLG00000003019	-	64	36.620	ENSXMAG00000002598	zgc:123010	56	38.916	Xiphophorus_maculatus