EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000003313 (Gene tree)
Gene ID: 113034839
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4491 bases
Position: chr2:25166741-25171231
Accession: ZDB-GENE-040426-1856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000005062	zf-RNPHF	PF08080.12	1.4e-11	1	1
ENSACLP00000005062	RRM_1	PF00076.22	2.4e-33	1	3
ENSACLP00000005062	RRM_1	PF00076.22	2.4e-33	2	3
ENSACLP00000005062	RRM_1	PF00076.22	2.4e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000005167	-	1119	-	ENSACLP00000005062	372 (aa)	-	-

Gene Model

Click here to download ENSACLG00000003313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000003313's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000003313	hnrnph1	93	58.245	ENSACLG00000008447	hnrnph3	95	59.103
ENSACLG00000003313	hnrnph1	93	42.735	ENSACLG00000003685	-	78	42.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000003313	hnrnph1	97	94.382	ENSAPOG00000016614	hnrnph1	84	94.382	Acanthochromis_polyacanthus
ENSACLG00000003313	hnrnph1	96	94.663	ENSACIG00000008964	hnrnph1	89	94.663	Amphilophus_citrinellus
ENSACLG00000003313	hnrnph1	97	94.382	ENSAOCG00000008372	hnrnph1	84	94.382	Amphiprion_ocellaris
ENSACLG00000003313	hnrnph1	97	94.101	ENSAPEG00000012980	hnrnph1	84	94.101	Amphiprion_percula
ENSACLG00000003313	hnrnph1	97	94.382	ENSATEG00000002792	hnrnph1	84	94.382	Anabas_testudineus
ENSACLG00000003313	hnrnph1	98	82.796	ENSACAG00000016323	-	81	82.796	Anolis_carolinensis
ENSACLG00000003313	hnrnph1	92	87.135	ENSAMXG00000002483	hnrnph1	89	86.872	Astyanax_mexicanus
ENSACLG00000003313	hnrnph1	96	83.193	ENSAMXG00000030703	hnrnph1l	71	85.154	Astyanax_mexicanus
ENSACLG00000003313	hnrnph1	97	93.539	ENSCSEG00000015891	hnrnph1	83	93.539	Cynoglossus_semilaevis
ENSACLG00000003313	hnrnph1	97	92.958	ENSCVAG00000014097	hnrnph1	91	92.958	Cyprinodon_variegatus
ENSACLG00000003313	hnrnph1	93	87.135	ENSDARG00000040881	hnrnph1	95	87.151	Danio_rerio
ENSACLG00000003313	hnrnph1	91	86.217	ENSDARG00000005551	hnrnph1l	84	87.955	Danio_rerio
ENSACLG00000003313	hnrnph1	97	89.167	ENSELUG00000006715	hnrnph1	97	90.000	Esox_lucius
ENSACLG00000003313	hnrnph1	96	80.886	ENSELUG00000021437	-	90	85.278	Esox_lucius
ENSACLG00000003313	hnrnph1	95	90.704	ENSFHEG00000008474	hnrnph1	91	92.113	Fundulus_heteroclitus
ENSACLG00000003313	hnrnph1	98	85.946	ENSGMOG00000006782	hnrnph1	90	87.297	Gadus_morhua
ENSACLG00000003313	hnrnph1	97	94.366	ENSGAFG00000006280	hnrnph1	84	94.366	Gambusia_affinis
ENSACLG00000003313	hnrnph1	97	89.888	ENSGACG00000018352	hnrnph1	89	88.172	Gasterosteus_aculeatus
ENSACLG00000003313	hnrnph1	98	100.000	ENSHBUG00000010547	hnrnph1	99	100.000	Haplochromis_burtoni
ENSACLG00000003313	hnrnph1	96	90.652	ENSHCOG00000004513	hnrnph1	93	91.831	Hippocampus_comes
ENSACLG00000003313	hnrnph1	92	87.427	ENSIPUG00000018262	hnrnph1	82	87.679	Ictalurus_punctatus
ENSACLG00000003313	hnrnph1	94	84.527	ENSIPUG00000024047	hnrnph1l	93	82.016	Ictalurus_punctatus
ENSACLG00000003313	hnrnph1	97	91.011	ENSKMAG00000018802	hnrnph1	84	91.573	Kryptolebias_marmoratus
ENSACLG00000003313	hnrnph1	97	92.978	ENSLBEG00000027811	hnrnph1	84	92.978	Labrus_bergylta
ENSACLG00000003313	hnrnph1	97	85.294	ENSLOCG00000012510	hnrnph1	84	87.027	Lepisosteus_oculatus
ENSACLG00000003313	hnrnph1	98	57.221	ENSMMUG00000017392	-	83	55.000	Macaca_mulatta
ENSACLG00000003313	hnrnph1	98	57.221	ENSMNEG00000030544	-	83	55.000	Macaca_nemestrina
ENSACLG00000003313	hnrnph1	98	93.989	ENSMAMG00000011478	hnrnph1	98	93.989	Mastacembelus_armatus
ENSACLG00000003313	hnrnph1	97	95.787	ENSMZEG00005009791	hnrnph1	84	95.787	Maylandia_zebra
ENSACLG00000003313	hnrnph1	95	92.330	ENSMMOG00000009064	hnrnph1	89	92.135	Mola_mola
ENSACLG00000003313	hnrnph1	77	53.488	ENSMODG00000002200	-	89	53.488	Monodelphis_domestica
ENSACLG00000003313	hnrnph1	98	95.238	ENSMALG00000003999	hnrnph1	99	95.238	Monopterus_albus
ENSACLG00000003313	hnrnph1	98	100.000	ENSNBRG00000015406	hnrnph1	99	100.000	Neolamprologus_brichardi
ENSACLG00000003313	hnrnph1	97	95.506	ENSONIG00000017754	hnrnph1	84	95.506	Oreochromis_niloticus
ENSACLG00000003313	hnrnph1	97	94.101	ENSORLG00000006932	hnrnph1	84	94.101	Oryzias_latipes
ENSACLG00000003313	hnrnph1	97	94.101	ENSORLG00020007881	hnrnph1	84	94.101	Oryzias_latipes_hni
ENSACLG00000003313	hnrnph1	97	94.101	ENSORLG00015005306	hnrnph1	84	94.101	Oryzias_latipes_hsok
ENSACLG00000003313	hnrnph1	97	94.663	ENSOMEG00000009827	hnrnph1	90	94.663	Oryzias_melastigma
ENSACLG00000003313	hnrnph1	96	86.555	ENSPKIG00000018203	hnrnph1l	84	87.955	Paramormyrops_kingsleyae
ENSACLG00000003313	hnrnph1	97	83.836	ENSPKIG00000009532	-	92	76.965	Paramormyrops_kingsleyae
ENSACLG00000003313	hnrnph1	93	89.337	ENSPMGG00000012151	hnrnph1	93	90.756	Periophthalmus_magnuspinnatus
ENSACLG00000003313	hnrnph1	97	94.930	ENSPFOG00000004097	hnrnph1	84	94.930	Poecilia_formosa
ENSACLG00000003313	hnrnph1	97	94.930	ENSPLAG00000011771	hnrnph1	84	94.930	Poecilia_latipinna
ENSACLG00000003313	hnrnph1	97	94.648	ENSPMEG00000019446	hnrnph1	84	94.648	Poecilia_mexicana
ENSACLG00000003313	hnrnph1	97	94.648	ENSPREG00000005780	hnrnph1	90	89.722	Poecilia_reticulata
ENSACLG00000003313	hnrnph1	98	100.000	ENSPNYG00000000204	hnrnph1	99	100.000	Pundamilia_nyererei
ENSACLG00000003313	hnrnph1	98	82.927	ENSPNAG00000002784	hnrnph1l	99	83.060	Pygocentrus_nattereri
ENSACLG00000003313	hnrnph1	92	86.842	ENSPNAG00000000439	hnrnph1	90	85.326	Pygocentrus_nattereri
ENSACLG00000003313	hnrnph1	97	86.538	ENSSFOG00015016055	-	85	86.849	Scleropages_formosus
ENSACLG00000003313	hnrnph1	96	89.916	ENSSFOG00015022796	hnrnph1l	90	87.709	Scleropages_formosus
ENSACLG00000003313	hnrnph1	97	92.758	ENSSMAG00000007820	hnrnph1	88	91.643	Scophthalmus_maximus
ENSACLG00000003313	hnrnph1	97	94.382	ENSSDUG00000008785	hnrnph1	84	94.382	Seriola_dumerili
ENSACLG00000003313	hnrnph1	97	94.382	ENSSLDG00000010685	hnrnph1	84	94.382	Seriola_lalandi_dorsalis
ENSACLG00000003313	hnrnph1	97	94.382	ENSSPAG00000009921	hnrnph1	84	94.382	Stegastes_partitus
ENSACLG00000003313	hnrnph1	96	90.169	ENSTRUG00000020069	hnrnph1	92	91.292	Takifugu_rubripes
ENSACLG00000003313	hnrnph1	96	81.471	ENSXETG00000018321	hnrnph1	83	83.471	Xenopus_tropicalis
ENSACLG00000003313	hnrnph1	97	95.493	ENSXCOG00000009133	hnrnph1	88	95.493	Xiphophorus_couchianus
ENSACLG00000003313	hnrnph1	97	94.648	ENSXMAG00000021332	hnrnph1	89	94.648	Xiphophorus_maculatus