EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000003326 (Gene tree)
Gene ID: 113023477
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-1A
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 5154 bases
Position: chr6:269914-275067
Accession: 113023477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000004967	MMR_HSR1	PF01926.23	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000005066	-	609	-	ENSACLP00000004967	202 (aa)	XP_026025286	UPI00022B3980

Gene Model

Click here to download ENSACLG00000003326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000003326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000003326	-	90	32.973	ENSACLG00000002819	rab23	86	31.707
ENSACLG00000003326	-	82	49.091	ENSACLG00000018852	-	75	49.091
ENSACLG00000003326	-	96	54.545	ENSACLG00000019643	-	99	54.545
ENSACLG00000003326	-	60	30.894	ENSACLG00000015415	-	58	30.894
ENSACLG00000003326	-	58	32.203	ENSACLG00000021872	arl8bb	61	32.203
ENSACLG00000003326	-	55	37.500	ENSACLG00000014417	RAP2B	93	37.903
ENSACLG00000003326	-	79	39.877	ENSACLG00000018847	RAB7A	79	39.877
ENSACLG00000003326	-	98	42.927	ENSACLG00000018262	rab25a	96	42.927
ENSACLG00000003326	-	77	37.654	ENSACLG00000008602	RAB29	98	37.654
ENSACLG00000003326	-	81	38.095	ENSACLG00000004795	rab9b	76	38.095
ENSACLG00000003326	-	82	43.820	ENSACLG00000005720	rab33ba	77	42.703
ENSACLG00000003326	-	100	94.089	ENSACLG00000007644	rab1ab	100	94.089
ENSACLG00000003326	-	59	32.500	ENSACLG00000013597	arl8ba	62	32.500
ENSACLG00000003326	-	79	39.877	ENSACLG00000024502	-	79	39.877
ENSACLG00000003326	-	97	35.644	ENSACLG00000006647	rab9a	97	35.644
ENSACLG00000003326	-	82	49.701	ENSACLG00000011484	rab18a	81	49.701
ENSACLG00000003326	-	96	43.655	ENSACLG00000008615	-	88	43.655
ENSACLG00000003326	-	97	45.128	ENSACLG00000006329	-	90	45.128
ENSACLG00000003326	-	79	30.303	ENSACLG00000004019	dnajc27	60	30.303
ENSACLG00000003326	-	78	37.888	ENSACLG00000005733	rab34b	61	37.888
ENSACLG00000003326	-	99	46.411	ENSACLG00000007076	rab11bb	96	46.411
ENSACLG00000003326	-	58	31.667	ENSACLG00000016659	-	59	31.667
ENSACLG00000003326	-	83	53.571	ENSACLG00000005420	rab11ba	77	53.571
ENSACLG00000003326	-	96	77.665	ENSACLG00000013734	-	93	77.665
ENSACLG00000003326	-	96	43.299	ENSACLG00000018066	rab5aa	89	43.299
ENSACLG00000003326	-	96	38.191	ENSACLG00000019423	rab41	91	38.191
ENSACLG00000003326	-	82	53.012	ENSACLG00000005446	-	76	53.012
ENSACLG00000003326	-	98	44.949	ENSACLG00000010251	rab25b	96	44.949
ENSACLG00000003326	-	57	31.967	ENSACLG00000009822	-	60	31.967
ENSACLG00000003326	-	87	42.135	ENSACLG00000007514	rab42a	82	42.135
ENSACLG00000003326	-	61	34.127	ENSACLG00000024991	arl4d	61	34.127
ENSACLG00000003326	-	81	37.576	ENSACLG00000027515	KRAS	85	38.037
ENSACLG00000003326	-	85	36.158	ENSACLG00000001181	hrasb	93	36.158
ENSACLG00000003326	-	99	34.804	ENSACLG00000001218	RAB17	89	34.804
ENSACLG00000003326	-	78	37.654	ENSACLG00000021109	si:dkey-13a21.4	78	37.654
ENSACLG00000003326	-	58	32.231	ENSACLG00000021338	arl2	61	32.231
ENSACLG00000003326	-	95	45.685	ENSACLG00000000860	-	88	45.685
ENSACLG00000003326	-	81	37.576	ENSACLG00000027677	KRAS	85	38.037
ENSACLG00000003326	-	97	36.275	ENSACLG00000003898	rab32b	92	36.275
ENSACLG00000003326	-	78	39.264	ENSACLG00000005093	rab34a	60	39.264
ENSACLG00000003326	-	69	30.496	ENSACLG00000027139	arl3	72	30.496
ENSACLG00000003326	-	81	30.994	ENSACLG00000016163	rasl11b	75	30.108
ENSACLG00000003326	-	81	35.758	ENSACLG00000011249	rras	83	34.756
ENSACLG00000003326	-	83	47.727	ENSACLG00000027006	zgc:101559	75	47.727
ENSACLG00000003326	-	96	38.462	ENSACLG00000025138	rab6ba	93	38.462
ENSACLG00000003326	-	99	49.029	ENSACLG00000001775	rab11a	96	49.029
ENSACLG00000003326	-	100	93.069	ENSACLG00000013668	rab1ba	100	93.069
ENSACLG00000003326	-	72	44.371	ENSACLG00000010965	-	63	44.371
ENSACLG00000003326	-	81	31.548	ENSACLG00000009103	si:cabz01085950.1	82	31.548
ENSACLG00000003326	-	96	45.128	ENSACLG00000015289	rab18b	95	45.128
ENSACLG00000003326	-	58	31.148	ENSACLG00000014159	-	61	31.148
ENSACLG00000003326	-	82	35.928	ENSACLG00000007804	si:ch73-116o1.2	80	35.928
ENSACLG00000003326	-	99	47.826	ENSACLG00000010268	rab11al	96	47.826
ENSACLG00000003326	-	83	50.296	ENSACLG00000007696	rab12	78	46.561
ENSACLG00000003326	-	84	38.728	ENSACLG00000024456	-	82	38.728
ENSACLG00000003326	-	84	45.614	ENSACLG00000009468	RAB39B	80	45.614
ENSACLG00000003326	-	80	47.531	ENSACLG00000001646	-	77	47.531
ENSACLG00000003326	-	84	45.614	ENSACLG00000022893	-	80	45.614
ENSACLG00000003326	-	84	45.614	ENSACLG00000027590	-	80	45.614
ENSACLG00000003326	-	84	33.714	ENSACLG00000008646	rheb	94	33.714
ENSACLG00000003326	-	82	51.205	ENSACLG00000023526	rab30	82	51.205
ENSACLG00000003326	-	96	37.879	ENSACLG00000026487	rab6bb	93	37.879
ENSACLG00000003326	-	77	36.538	ENSACLG00000025632	rabl2	68	36.538
ENSACLG00000003326	-	60	33.083	ENSACLG00000002442	arfrp1	64	33.083
ENSACLG00000003326	-	81	44.643	ENSACLG00000021547	rab33a	60	44.643
ENSACLG00000003326	-	84	49.112	ENSACLG00000026336	rab15	79	49.112
ENSACLG00000003326	-	58	33.898	ENSACLG00000011996	arl8a	61	33.898
ENSACLG00000003326	-	79	62.500	ENSACLG00000018721	si:dkey-16l2.16	76	62.500
ENSACLG00000003326	-	58	31.092	ENSACLG00000014218	arl4cb	61	31.092
ENSACLG00000003326	-	96	38.144	ENSACLG00000021470	rab22a	97	38.144
ENSACLG00000003326	-	97	46.154	ENSACLG00000013505	-	90	46.154
ENSACLG00000003326	-	96	44.103	ENSACLG00000002706	rab5c	89	44.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000003326	-	100	96.040	ENSG00000138069	RAB1A	98	100.000	Homo_sapiens
ENSACLG00000003326	-	100	99.505	ENSAPOG00000008143	-	100	99.505	Acanthochromis_polyacanthus
ENSACLG00000003326	-	100	96.040	ENSAMEG00000001127	RAB1A	99	96.040	Ailuropoda_melanoleuca
ENSACLG00000003326	-	100	99.505	ENSAOCG00000020606	-	100	99.505	Amphiprion_ocellaris
ENSACLG00000003326	-	100	99.505	ENSAPEG00000022488	-	100	99.505	Amphiprion_percula
ENSACLG00000003326	-	100	96.040	ENSANAG00000020929	RAB1A	99	96.040	Aotus_nancymaae
ENSACLG00000003326	-	100	93.069	ENSAMXG00000034850	-	100	93.069	Astyanax_mexicanus
ENSACLG00000003326	-	100	96.040	ENSBTAG00000016720	RAB1A	99	96.040	Bos_taurus
ENSACLG00000003326	-	100	96.040	ENSCJAG00000046275	RAB1A	99	96.040	Callithrix_jacchus
ENSACLG00000003326	-	100	96.040	ENSCAFG00000003187	RAB1A	99	96.040	Canis_familiaris
ENSACLG00000003326	-	100	96.040	ENSCAFG00020026971	RAB1A	99	96.040	Canis_lupus_dingo
ENSACLG00000003326	-	98	95.939	ENSCHIG00000014060	RAB1A	100	93.171	Capra_hircus
ENSACLG00000003326	-	100	94.554	ENSTSYG00000005996	RAB1A	100	95.939	Carlito_syrichta
ENSACLG00000003326	-	100	96.040	ENSCPOG00000015437	RAB1A	99	96.040	Cavia_porcellus
ENSACLG00000003326	-	100	96.040	ENSCCAG00000021869	RAB1A	99	96.040	Cebus_capucinus
ENSACLG00000003326	-	100	96.040	ENSCATG00000030853	RAB1A	99	96.040	Cercocebus_atys
ENSACLG00000003326	-	100	96.040	ENSCLAG00000014766	RAB1A	99	96.040	Chinchilla_lanigera
ENSACLG00000003326	-	100	96.535	ENSCPBG00000013243	RAB1A	99	96.535	Chrysemys_picta_bellii
ENSACLG00000003326	-	100	93.564	ENSCANG00000035916	RAB1A	99	93.564	Colobus_angolensis_palliatus
ENSACLG00000003326	-	100	96.040	ENSCGRG00001012691	-	99	96.040	Cricetulus_griseus_chok1gshd
ENSACLG00000003326	-	100	96.040	ENSCGRG00000008456	-	99	96.040	Cricetulus_griseus_crigri
ENSACLG00000003326	-	100	96.040	ENSDNOG00000018236	RAB1A	99	96.040	Dasypus_novemcinctus
ENSACLG00000003326	-	100	96.040	ENSDORG00000028628	-	99	96.040	Dipodomys_ordii
ENSACLG00000003326	-	100	85.222	FBgn0285937	Rab1	99	85.222	Drosophila_melanogaster
ENSACLG00000003326	-	100	96.040	ENSETEG00000002205	RAB1A	100	96.040	Echinops_telfairi
ENSACLG00000003326	-	100	96.040	ENSEASG00005007298	RAB1A	99	96.040	Equus_asinus_asinus
ENSACLG00000003326	-	100	96.040	ENSECAG00000009926	RAB1A	99	96.040	Equus_caballus
ENSACLG00000003326	-	100	96.040	ENSEEUG00000011721	RAB1A	100	96.040	Erinaceus_europaeus
ENSACLG00000003326	-	100	96.078	ENSELUG00000012166	RAB1A	96	96.078	Esox_lucius
ENSACLG00000003326	-	100	96.040	ENSFCAG00000002536	RAB1A	99	96.040	Felis_catus
ENSACLG00000003326	-	100	94.554	ENSFALG00000013624	RAB1A	99	94.554	Ficedula_albicollis
ENSACLG00000003326	-	100	96.040	ENSFDAG00000019505	-	99	96.040	Fukomys_damarensis
ENSACLG00000003326	-	100	98.515	ENSFHEG00000014414	-	100	98.515	Fundulus_heteroclitus
ENSACLG00000003326	-	100	96.535	ENSGALG00000031582	RAB1A	99	96.535	Gallus_gallus
ENSACLG00000003326	-	100	98.020	ENSGAFG00000000918	-	100	98.020	Gambusia_affinis
ENSACLG00000003326	-	100	96.535	ENSGAGG00000006802	RAB1A	99	96.535	Gopherus_agassizii
ENSACLG00000003326	-	100	96.040	ENSGGOG00000026603	RAB1A	99	96.040	Gorilla_gorilla
ENSACLG00000003326	-	100	96.040	ENSHGLG00000013585	RAB1A	99	96.040	Heterocephalus_glaber_female
ENSACLG00000003326	-	100	94.554	ENSHGLG00100007994	RAB1A	99	94.554	Heterocephalus_glaber_male
ENSACLG00000003326	-	100	96.040	ENSSTOG00000020693	-	99	96.040	Ictidomys_tridecemlineatus
ENSACLG00000003326	-	98	95.939	ENSJJAG00000014396	Rab1a	100	95.939	Jaculus_jaculus
ENSACLG00000003326	-	98	98.985	ENSKMAG00000014038	-	93	98.985	Kryptolebias_marmoratus
ENSACLG00000003326	-	100	98.515	ENSLBEG00000028426	RAB1A	100	98.515	Labrus_bergylta
ENSACLG00000003326	-	100	96.040	ENSLACG00000012869	RAB1A	99	96.040	Latimeria_chalumnae
ENSACLG00000003326	-	100	96.040	ENSLAFG00000016666	RAB1A	99	96.040	Loxodonta_africana
ENSACLG00000003326	-	100	96.040	ENSMFAG00000046246	RAB1A	99	96.040	Macaca_fascicularis
ENSACLG00000003326	-	98	95.939	ENSMMUG00000021721	RAB1A	91	95.939	Macaca_mulatta
ENSACLG00000003326	-	95	97.382	ENSMNEG00000028414	-	96	97.382	Macaca_nemestrina
ENSACLG00000003326	-	100	96.040	ENSMLEG00000042535	RAB1A	99	96.040	Mandrillus_leucophaeus
ENSACLG00000003326	-	100	100.000	ENSMZEG00005013959	-	100	100.000	Maylandia_zebra
ENSACLG00000003326	-	98	96.447	ENSMGAG00000004611	RAB1A	98	96.447	Meleagris_gallopavo
ENSACLG00000003326	-	100	95.545	ENSMAUG00000012156	Rab1a	99	95.545	Mesocricetus_auratus
ENSACLG00000003326	-	100	96.040	ENSMICG00000012587	RAB1A	99	96.040	Microcebus_murinus
ENSACLG00000003326	-	100	95.545	ENSMOCG00000017022	Rab1a	99	95.545	Microtus_ochrogaster
ENSACLG00000003326	-	100	97.030	ENSMMOG00000018709	RAB1A	100	97.030	Mola_mola
ENSACLG00000003326	-	100	96.535	ENSMODG00000003340	RAB1A	99	96.535	Monodelphis_domestica
ENSACLG00000003326	-	100	96.040	MGP_CAROLIEiJ_G0016115	Rab1a	99	96.040	Mus_caroli
ENSACLG00000003326	-	100	96.040	ENSMUSG00000020149	Rab1a	100	96.040	Mus_musculus
ENSACLG00000003326	-	100	96.040	MGP_PahariEiJ_G0016776	Rab1a	99	96.040	Mus_pahari
ENSACLG00000003326	-	100	96.040	MGP_SPRETEiJ_G0016958	Rab1a	100	96.040	Mus_spretus
ENSACLG00000003326	-	100	96.040	ENSMPUG00000006139	RAB1A	80	96.040	Mustela_putorius_furo
ENSACLG00000003326	-	100	96.040	ENSMLUG00000009489	RAB1A	99	96.040	Myotis_lucifugus
ENSACLG00000003326	-	100	96.040	ENSNGAG00000005838	Rab1a	99	96.040	Nannospalax_galili
ENSACLG00000003326	-	100	100.000	ENSNBRG00000020492	-	100	100.000	Neolamprologus_brichardi
ENSACLG00000003326	-	98	95.939	ENSOPRG00000006595	RAB1A	100	95.939	Ochotona_princeps
ENSACLG00000003326	-	94	95.767	ENSODEG00000011248	-	96	95.833	Octodon_degus
ENSACLG00000003326	-	100	98.020	ENSONIG00000006819	-	99	98.020	Oreochromis_niloticus
ENSACLG00000003326	-	100	96.535	ENSOANG00000012438	RAB1A	99	96.535	Ornithorhynchus_anatinus
ENSACLG00000003326	-	100	96.040	ENSOCUG00000017003	RAB1A	99	96.040	Oryctolagus_cuniculus
ENSACLG00000003326	-	100	96.040	ENSOGAG00000026181	RAB1A	99	96.040	Otolemur_garnettii
ENSACLG00000003326	-	98	95.939	ENSOARG00000019997	RAB1A	97	95.939	Ovis_aries
ENSACLG00000003326	-	100	96.040	ENSPPAG00000030253	RAB1A	100	96.040	Pan_paniscus
ENSACLG00000003326	-	100	96.040	ENSPPRG00000025077	RAB1A	99	96.040	Panthera_pardus
ENSACLG00000003326	-	98	95.939	ENSPTIG00000013471	RAB1A	97	95.939	Panthera_tigris_altaica
ENSACLG00000003326	-	100	96.040	ENSPTRG00000011989	RAB1A	99	96.040	Pan_troglodytes
ENSACLG00000003326	-	100	96.040	ENSPANG00000010485	RAB1A	99	96.040	Papio_anubis
ENSACLG00000003326	-	100	94.059	ENSPSIG00000008028	RAB1A	99	94.059	Pelodiscus_sinensis
ENSACLG00000003326	-	100	99.505	ENSPMGG00000021015	-	99	99.505	Periophthalmus_magnuspinnatus
ENSACLG00000003326	-	100	96.040	ENSPEMG00000009340	Rab1a	99	96.040	Peromyscus_maniculatus_bairdii
ENSACLG00000003326	-	100	96.535	ENSPCIG00000023212	RAB1A	99	96.535	Phascolarctos_cinereus
ENSACLG00000003326	-	100	97.525	ENSPFOG00000000498	-	98	97.525	Poecilia_formosa
ENSACLG00000003326	-	100	97.525	ENSPLAG00000015592	-	100	97.525	Poecilia_latipinna
ENSACLG00000003326	-	100	97.525	ENSPMEG00000005288	-	100	97.525	Poecilia_mexicana
ENSACLG00000003326	-	100	96.040	ENSPPYG00000012360	RAB1A	99	96.040	Pongo_abelii
ENSACLG00000003326	-	100	96.040	ENSPCOG00000017244	RAB1A	99	96.040	Propithecus_coquereli
ENSACLG00000003326	-	100	100.000	ENSPNYG00000015841	-	100	100.000	Pundamilia_nyererei
ENSACLG00000003326	-	100	96.040	ENSRNOG00000004992	Rab1a	99	96.040	Rattus_norvegicus
ENSACLG00000003326	-	100	96.040	ENSSBOG00000023732	RAB1A	99	96.040	Saimiri_boliviensis_boliviensis
ENSACLG00000003326	-	98	96.447	ENSSHAG00000003597	RAB1A	98	95.025	Sarcophilus_harrisii
ENSACLG00000003326	-	100	99.010	ENSSMAG00000021049	-	100	99.010	Scophthalmus_maximus
ENSACLG00000003326	-	100	100.000	ENSSDUG00000022535	RAB1A	100	100.000	Seriola_dumerili
ENSACLG00000003326	-	100	96.535	ENSSPUG00000012822	RAB1A	99	96.535	Sphenodon_punctatus
ENSACLG00000003326	-	100	99.505	ENSSPAG00000012564	-	100	99.505	Stegastes_partitus
ENSACLG00000003326	-	100	96.040	ENSSSCG00000008359	RAB1A	100	95.939	Sus_scrofa
ENSACLG00000003326	-	100	94.554	ENSTGUG00000002328	RAB1A	99	94.554	Taeniopygia_guttata
ENSACLG00000003326	-	100	99.010	ENSTRUG00000024994	RAB1A	100	99.010	Takifugu_rubripes
ENSACLG00000003326	-	98	95.939	ENSUMAG00000021038	RAB1A	99	95.939	Ursus_maritimus
ENSACLG00000003326	-	98	95.455	ENSVPAG00000005640	RAB1A	99	95.455	Vicugna_pacos
ENSACLG00000003326	-	100	96.040	ENSVVUG00000027588	RAB1A	99	96.040	Vulpes_vulpes
ENSACLG00000003326	-	100	98.020	ENSXMAG00000015776	-	100	98.020	Xiphophorus_maculatus