EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000003542 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4490 bases
Position: chr3:47563718-47568207
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000005267	Exo_endo_phos	PF03372.23	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000005377	-	735	-	ENSACLP00000005267	244 (aa)	-	-

Gene Model

Click here to download ENSACLG00000003542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000003542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000003542	-	87	30.876	ENSACLG00000005243	-	82	30.876
ENSACLG00000003542	-	88	32.258	ENSACLG00000003399	-	56	32.258
ENSACLG00000003542	-	100	98.367	ENSACLG00000008485	-	100	98.367
ENSACLG00000003542	-	87	31.336	ENSACLG00000001544	-	56	31.336

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000003542	-	94	96.070	ENSMZEG00005019985	-	52	96.070	Maylandia_zebra
ENSACLG00000003542	-	94	95.197	ENSMZEG00005027508	-	93	95.197	Maylandia_zebra
ENSACLG00000003542	-	96	94.468	ENSMZEG00005020264	-	99	94.468	Maylandia_zebra
ENSACLG00000003542	-	89	46.330	ENSORLG00000028210	-	82	46.330	Oryzias_latipes
ENSACLG00000003542	-	92	42.424	ENSORLG00020003602	-	88	42.424	Oryzias_latipes_hni
ENSACLG00000003542	-	94	44.589	ENSORLG00020010001	-	95	44.589	Oryzias_latipes_hni
ENSACLG00000003542	-	94	86.026	ENSPKIG00000011842	-	95	86.026	Paramormyrops_kingsleyae
ENSACLG00000003542	-	94	73.799	ENSPKIG00000013429	-	95	73.799	Paramormyrops_kingsleyae
ENSACLG00000003542	-	91	49.565	ENSPNAG00000002115	-	95	49.565	Pygocentrus_nattereri