EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000003546 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 5558 bases
Position: chr3:47576953-47582510
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000005277	zf-C2H2	PF00096.26	4.2e-41	1	8
ENSACLP00000005277	zf-C2H2	PF00096.26	4.2e-41	2	8
ENSACLP00000005277	zf-C2H2	PF00096.26	4.2e-41	3	8
ENSACLP00000005277	zf-C2H2	PF00096.26	4.2e-41	4	8
ENSACLP00000005277	zf-C2H2	PF00096.26	4.2e-41	5	8
ENSACLP00000005277	zf-C2H2	PF00096.26	4.2e-41	6	8
ENSACLP00000005277	zf-C2H2	PF00096.26	4.2e-41	7	8
ENSACLP00000005277	zf-C2H2	PF00096.26	4.2e-41	8	8
ENSACLP00000005277	zf-met	PF12874.7	2.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000005387	-	1548	-	ENSACLP00000005277	515 (aa)	-	-

Gene Model

Click here to download ENSACLG00000003546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000003546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000003546	-	58	72.018	ENSACLG00000000411	-	89	72.018
ENSACLG00000003546	-	56	42.697	ENSACLG00000021022	-	66	42.697
ENSACLG00000003546	-	58	41.844	ENSACLG00000021184	-	53	41.844
ENSACLG00000003546	-	58	67.119	ENSACLG00000022383	-	93	67.119
ENSACLG00000003546	-	58	45.775	ENSACLG00000024308	-	98	45.638
ENSACLG00000003546	-	58	41.615	ENSACLG00000005795	-	57	41.615
ENSACLG00000003546	-	58	61.413	ENSACLG00000019482	-	79	61.413
ENSACLG00000003546	-	58	42.593	ENSACLG00000017321	-	77	42.529
ENSACLG00000003546	-	58	61.765	ENSACLG00000017329	-	85	61.279
ENSACLG00000003546	-	58	33.854	ENSACLG00000004663	-	82	33.918
ENSACLG00000003546	-	58	65.873	ENSACLG00000022475	-	94	65.873
ENSACLG00000003546	-	58	44.292	ENSACLG00000019674	-	92	44.292
ENSACLG00000003546	-	58	41.624	ENSACLG00000017801	-	75	41.624
ENSACLG00000003546	-	64	49.555	ENSACLG00000015816	-	95	49.555
ENSACLG00000003546	-	64	56.856	ENSACLG00000022360	-	96	56.856
ENSACLG00000003546	-	58	44.928	ENSACLG00000017576	-	83	44.928
ENSACLG00000003546	-	58	35.644	ENSACLG00000022287	-	60	35.644
ENSACLG00000003546	-	62	58.567	ENSACLG00000021846	-	88	58.567
ENSACLG00000003546	-	58	45.545	ENSACLG00000020474	-	94	45.545
ENSACLG00000003546	-	62	45.802	ENSACLG00000019270	-	74	45.802
ENSACLG00000003546	-	58	36.364	ENSACLG00000000102	-	57	36.242
ENSACLG00000003546	-	60	44.976	ENSACLG00000024957	-	95	44.295
ENSACLG00000003546	-	58	47.727	ENSACLG00000019424	-	99	44.615
ENSACLG00000003546	-	58	61.765	ENSACLG00000000487	-	87	61.765
ENSACLG00000003546	-	63	55.705	ENSACLG00000019499	-	92	57.895
ENSACLG00000003546	-	58	60.000	ENSACLG00000007888	-	75	60.000
ENSACLG00000003546	-	58	60.853	ENSACLG00000017411	-	88	60.853
ENSACLG00000003546	-	63	38.868	ENSACLG00000017996	prdm5	72	38.868
ENSACLG00000003546	-	57	33.745	ENSACLG00000016648	-	68	34.855
ENSACLG00000003546	-	69	47.246	ENSACLG00000014600	-	90	44.476
ENSACLG00000003546	-	58	40.127	ENSACLG00000022439	-	79	40.127
ENSACLG00000003546	-	58	45.062	ENSACLG00000024647	-	71	45.062
ENSACLG00000003546	-	58	42.759	ENSACLG00000018700	-	99	42.759
ENSACLG00000003546	-	58	65.957	ENSACLG00000018701	-	79	65.957
ENSACLG00000003546	-	58	59.434	ENSACLG00000001368	-	87	55.417
ENSACLG00000003546	-	58	57.718	ENSACLG00000002844	-	83	57.718
ENSACLG00000003546	-	58	63.087	ENSACLG00000022302	-	96	63.087
ENSACLG00000003546	-	57	33.333	ENSACLG00000022305	-	89	33.333
ENSACLG00000003546	-	58	72.018	ENSACLG00000011239	-	74	72.018
ENSACLG00000003546	-	60	44.147	ENSACLG00000011237	-	98	44.295
ENSACLG00000003546	-	53	43.684	ENSACLG00000020268	-	64	43.684
ENSACLG00000003546	-	58	42.292	ENSACLG00000020260	-	100	42.292
ENSACLG00000003546	-	57	31.100	ENSACLG00000022191	znf407	67	31.100
ENSACLG00000003546	-	58	56.075	ENSACLG00000014365	-	94	53.691
ENSACLG00000003546	-	63	42.763	ENSACLG00000020393	-	89	42.763
ENSACLG00000003546	-	58	74.497	ENSACLG00000000537	-	98	71.141
ENSACLG00000003546	-	58	44.534	ENSACLG00000019318	-	97	43.434
ENSACLG00000003546	-	58	43.636	ENSACLG00000013935	-	84	43.636
ENSACLG00000003546	-	58	43.581	ENSACLG00000019291	-	88	43.581
ENSACLG00000003546	-	58	38.542	ENSACLG00000016841	-	68	38.542
ENSACLG00000003546	-	66	36.601	ENSACLG00000019167	-	88	36.601
ENSACLG00000003546	-	59	41.096	ENSACLG00000017487	-	69	41.096
ENSACLG00000003546	-	58	44.167	ENSACLG00000011642	-	80	44.167
ENSACLG00000003546	-	58	43.668	ENSACLG00000020339	-	55	43.668
ENSACLG00000003546	-	58	44.118	ENSACLG00000020333	-	52	44.118
ENSACLG00000003546	-	58	44.118	ENSACLG00000006718	-	52	44.118
ENSACLG00000003546	-	63	38.571	ENSACLG00000006697	-	68	42.636
ENSACLG00000003546	-	58	42.581	ENSACLG00000013033	-	81	42.581
ENSACLG00000003546	-	58	46.237	ENSACLG00000024294	-	72	46.237
ENSACLG00000003546	-	58	64.681	ENSACLG00000028002	-	86	64.681
ENSACLG00000003546	-	58	40.803	ENSACLG00000026538	-	83	40.803
ENSACLG00000003546	-	58	59.459	ENSACLG00000001018	-	88	68.085
ENSACLG00000003546	-	58	40.201	ENSACLG00000021045	-	79	40.201
ENSACLG00000003546	-	75	37.121	ENSACLG00000018551	snai2	90	37.121
ENSACLG00000003546	-	80	40.486	ENSACLG00000017449	-	84	33.668
ENSACLG00000003546	-	58	43.011	ENSACLG00000011658	-	88	43.011
ENSACLG00000003546	-	52	39.259	ENSACLG00000013531	-	88	39.259
ENSACLG00000003546	-	58	45.333	ENSACLG00000024459	-	84	45.333
ENSACLG00000003546	-	71	41.935	ENSACLG00000025251	-	95	43.431
ENSACLG00000003546	-	58	45.294	ENSACLG00000023305	-	92	45.294
ENSACLG00000003546	-	59	41.573	ENSACLG00000021056	-	59	41.573
ENSACLG00000003546	-	58	33.718	ENSACLG00000006702	-	75	42.081
ENSACLG00000003546	-	58	36.986	ENSACLG00000014349	znf341	51	38.235
ENSACLG00000003546	-	62	53.237	ENSACLG00000023963	-	93	53.237
ENSACLG00000003546	-	58	44.700	ENSACLG00000018746	-	97	40.367
ENSACLG00000003546	-	58	42.647	ENSACLG00000024670	-	71	42.647
ENSACLG00000003546	-	58	46.729	ENSACLG00000020975	-	85	44.578
ENSACLG00000003546	-	73	40.260	ENSACLG00000008641	gfi1aa	54	40.260
ENSACLG00000003546	-	58	56.135	ENSACLG00000001003	-	92	58.054
ENSACLG00000003546	-	80	51.894	ENSACLG00000014167	-	58	54.202
ENSACLG00000003546	-	58	43.289	ENSACLG00000020610	-	66	43.289
ENSACLG00000003546	-	58	40.187	ENSACLG00000020615	-	70	41.935
ENSACLG00000003546	-	64	43.421	ENSACLG00000013454	-	64	43.421
ENSACLG00000003546	-	58	35.965	ENSACLG00000007162	scrt1b	58	35.965
ENSACLG00000003546	-	58	42.500	ENSACLG00000027692	-	88	39.362
ENSACLG00000003546	-	62	49.495	ENSACLG00000015843	-	90	50.000
ENSACLG00000003546	-	58	43.200	ENSACLG00000017941	-	63	43.200
ENSACLG00000003546	-	58	34.123	ENSACLG00000026541	PRDM15	50	34.123
ENSACLG00000003546	-	62	50.000	ENSACLG00000023941	-	89	50.000
ENSACLG00000003546	-	58	53.363	ENSACLG00000022482	-	80	53.363
ENSACLG00000003546	-	60	45.902	ENSACLG00000008821	-	99	44.541
ENSACLG00000003546	-	58	55.191	ENSACLG00000014176	-	83	55.135
ENSACLG00000003546	-	58	58.644	ENSACLG00000003332	-	97	58.644
ENSACLG00000003546	-	58	42.857	ENSACLG00000008624	-	78	42.857
ENSACLG00000003546	-	58	35.484	ENSACLG00000005594	ZNF319	88	35.484
ENSACLG00000003546	-	66	36.556	ENSACLG00000015989	-	91	40.948
ENSACLG00000003546	-	56	43.885	ENSACLG00000016405	zbtb17	64	41.791
ENSACLG00000003546	-	58	42.857	ENSACLG00000005708	-	65	42.857
ENSACLG00000003546	-	58	44.560	ENSACLG00000025196	-	80	44.560
ENSACLG00000003546	-	57	54.098	ENSACLG00000017849	-	67	54.098
ENSACLG00000003546	-	58	61.409	ENSACLG00000007749	-	76	61.409
ENSACLG00000003546	-	58	45.638	ENSACLG00000023979	-	96	44.892
ENSACLG00000003546	-	58	46.196	ENSACLG00000017939	-	99	44.286
ENSACLG00000003546	-	57	30.854	ENSACLG00000012712	znf646	75	30.854
ENSACLG00000003546	-	79	41.115	ENSACLG00000021343	-	92	44.118
ENSACLG00000003546	-	58	54.251	ENSACLG00000014336	-	93	54.251
ENSACLG00000003546	-	58	59.816	ENSACLG00000022497	-	89	64.430
ENSACLG00000003546	-	58	62.963	ENSACLG00000022499	-	83	62.963
ENSACLG00000003546	-	58	60.909	ENSACLG00000019349	-	69	60.909
ENSACLG00000003546	-	58	41.518	ENSACLG00000006870	-	53	41.518
ENSACLG00000003546	-	66	61.074	ENSACLG00000000473	-	90	61.074
ENSACLG00000003546	-	57	41.729	ENSACLG00000012251	-	51	41.729
ENSACLG00000003546	-	58	40.476	ENSACLG00000017925	-	69	40.476
ENSACLG00000003546	-	58	44.108	ENSACLG00000024491	-	81	44.108
ENSACLG00000003546	-	58	42.748	ENSACLG00000008374	-	53	42.748
ENSACLG00000003546	-	58	38.846	ENSACLG00000027424	-	60	38.846
ENSACLG00000003546	-	65	46.923	ENSACLG00000026703	-	72	46.923
ENSACLG00000003546	-	58	41.156	ENSACLG00000022505	-	86	42.258
ENSACLG00000003546	-	58	70.256	ENSACLG00000001507	-	75	70.256
ENSACLG00000003546	-	58	44.828	ENSACLG00000018707	-	87	44.828
ENSACLG00000003546	-	58	76.250	ENSACLG00000000521	-	92	61.654
ENSACLG00000003546	-	58	43.716	ENSACLG00000008606	-	88	43.716
ENSACLG00000003546	-	58	72.881	ENSACLG00000001045	-	97	72.881
ENSACLG00000003546	-	58	58.725	ENSACLG00000003229	-	92	58.725
ENSACLG00000003546	-	58	41.748	ENSACLG00000001258	-	86	41.748
ENSACLG00000003546	-	56	39.726	ENSACLG00000003679	-	80	39.726
ENSACLG00000003546	-	58	41.455	ENSACLG00000015462	-	61	41.455
ENSACLG00000003546	-	58	61.074	ENSACLG00000006528	-	98	61.074
ENSACLG00000003546	-	58	42.857	ENSACLG00000027053	gfi1b	71	42.857
ENSACLG00000003546	-	58	43.624	ENSACLG00000025163	-	86	43.624
ENSACLG00000003546	-	58	39.098	ENSACLG00000019094	-	80	39.098
ENSACLG00000003546	-	56	76.744	ENSACLG00000018716	-	76	76.744
ENSACLG00000003546	-	58	32.364	ENSACLG00000020579	znf319b	84	32.450
ENSACLG00000003546	-	58	73.793	ENSACLG00000017336	-	93	73.793
ENSACLG00000003546	-	65	45.045	ENSACLG00000023513	-	89	44.304
ENSACLG00000003546	-	59	35.185	ENSACLG00000020231	-	91	35.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000003546	-	63	51.071	ENSACIG00000017644	-	86	51.071	Amphilophus_citrinellus
ENSACLG00000003546	-	60	60.490	ENSHBUG00000006250	-	95	60.490	Haplochromis_burtoni
ENSACLG00000003546	-	58	60.403	ENSMZEG00005020759	-	99	60.403	Maylandia_zebra
ENSACLG00000003546	-	63	61.423	ENSMZEG00005021801	-	85	61.423	Maylandia_zebra
ENSACLG00000003546	-	58	66.406	ENSMZEG00005012727	-	66	66.406	Maylandia_zebra
ENSACLG00000003546	-	58	61.881	ENSNBRG00000001608	-	95	61.881	Neolamprologus_brichardi
ENSACLG00000003546	-	58	63.755	ENSNBRG00000002542	-	83	63.755	Neolamprologus_brichardi
ENSACLG00000003546	-	58	63.087	ENSNBRG00000009815	-	83	63.087	Neolamprologus_brichardi
ENSACLG00000003546	-	58	73.333	ENSONIG00000007886	-	97	73.333	Oreochromis_niloticus
ENSACLG00000003546	-	58	62.081	ENSPNYG00000023637	-	71	62.081	Pundamilia_nyererei
ENSACLG00000003546	-	58	65.772	ENSPNYG00000021571	-	83	65.772	Pundamilia_nyererei
ENSACLG00000003546	-	58	69.364	ENSPNYG00000023916	-	76	69.364	Pundamilia_nyererei
ENSACLG00000003546	-	58	62.319	ENSPNYG00000005777	-	83	62.319	Pundamilia_nyererei