EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000003607 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 3697 bases
Position: chr1:20829804-20833500
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000005366	RVT_1	PF00078.27	3.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000005480	-	3697	-	ENSACLP00000005366	998 (aa)	-	-

Gene Model

Click here to download ENSACLG00000003607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000003607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000003607	-	87	98.163	ENSACLG00000013139	-	100	98.163
ENSACLG00000003607	-	93	99.138	ENSACLG00000009407	-	85	99.138
ENSACLG00000003607	-	75	98.663	ENSACLG00000017721	-	98	98.663
ENSACLG00000003607	-	93	98.707	ENSACLG00000017392	-	86	98.707
ENSACLG00000003607	-	93	99.138	ENSACLG00000022388	-	85	99.138
ENSACLG00000003607	-	93	99.030	ENSACLG00000013574	-	99	99.030
ENSACLG00000003607	-	93	98.815	ENSACLG00000007447	-	85	98.815
ENSACLG00000003607	-	93	97.091	ENSACLG00000013967	-	92	97.091
ENSACLG00000003607	-	93	98.815	ENSACLG00000003757	-	85	98.815
ENSACLG00000003607	-	92	98.043	ENSACLG00000002775	-	92	98.043
ENSACLG00000003607	-	93	97.845	ENSACLG00000009148	-	100	97.845
ENSACLG00000003607	-	76	98.292	ENSACLG00000027475	-	100	98.292
ENSACLG00000003607	-	93	99.138	ENSACLG00000017606	-	91	99.138
ENSACLG00000003607	-	76	98.153	ENSACLG00000006057	-	99	98.153
ENSACLG00000003607	-	93	98.921	ENSACLG00000018006	-	100	98.921
ENSACLG00000003607	-	93	98.491	ENSACLG00000002396	-	85	98.491
ENSACLG00000003607	-	93	98.056	ENSACLG00000019821	-	84	98.056
ENSACLG00000003607	-	84	97.852	ENSACLG00000021406	-	97	97.852
ENSACLG00000003607	-	77	98.956	ENSACLG00000005419	-	99	98.956
ENSACLG00000003607	-	93	98.817	ENSACLG00000016079	-	91	98.817
ENSACLG00000003607	-	64	98.903	ENSACLG00000023336	-	79	98.903
ENSACLG00000003607	-	93	98.815	ENSACLG00000019948	-	85	98.815
ENSACLG00000003607	-	93	98.491	ENSACLG00000021834	-	91	98.491
ENSACLG00000003607	-	83	97.232	ENSACLG00000021830	-	98	97.232
ENSACLG00000003607	-	73	99.312	ENSACLG00000016654	-	81	99.312
ENSACLG00000003607	-	68	99.112	ENSACLG00000022824	-	80	99.112
ENSACLG00000003607	-	93	99.030	ENSACLG00000011507	-	85	99.030
ENSACLG00000003607	-	93	98.707	ENSACLG00000013988	-	91	98.707
ENSACLG00000003607	-	93	97.091	ENSACLG00000007511	-	86	97.091
ENSACLG00000003607	-	64	99.214	ENSACLG00000014939	-	79	99.214
ENSACLG00000003607	-	93	98.925	ENSACLG00000013632	-	85	98.925
ENSACLG00000003607	-	93	99.246	ENSACLG00000025178	-	100	99.246
ENSACLG00000003607	-	76	98.549	ENSACLG00000004963	-	99	98.549
ENSACLG00000003607	-	93	99.030	ENSACLG00000014121	-	85	99.030

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000003607	-	54	34.336	ENSLACG00000016962	-	100	40.650	Latimeria_chalumnae
ENSACLG00000003607	-	65	45.385	ENSLACG00000012911	-	98	45.385	Latimeria_chalumnae
ENSACLG00000003607	-	50	32.122	ENSLACG00000013633	-	94	30.632	Latimeria_chalumnae
ENSACLG00000003607	-	56	36.760	ENSLACG00000004832	-	100	36.760	Latimeria_chalumnae
ENSACLG00000003607	-	64	39.637	ENSLACG00000004233	-	99	39.637	Latimeria_chalumnae
ENSACLG00000003607	-	61	34.824	ENSLACG00000006107	-	99	34.185	Latimeria_chalumnae
ENSACLG00000003607	-	80	37.515	ENSLACG00000013644	-	99	37.515	Latimeria_chalumnae
ENSACLG00000003607	-	92	98.585	ENSMZEG00005028496	-	93	98.585	Maylandia_zebra
ENSACLG00000003607	-	87	79.817	ENSORLG00000028072	-	100	79.817	Oryzias_latipes
ENSACLG00000003607	-	93	78.664	ENSORLG00000023099	-	100	78.664	Oryzias_latipes
ENSACLG00000003607	-	93	78.794	ENSORLG00000026631	-	86	78.794	Oryzias_latipes
ENSACLG00000003607	-	78	80.231	ENSORLG00000023528	-	99	80.231	Oryzias_latipes
ENSACLG00000003607	-	87	80.161	ENSORLG00000027125	-	100	80.161	Oryzias_latipes
ENSACLG00000003607	-	82	80.488	ENSORLG00000022216	-	100	80.488	Oryzias_latipes
ENSACLG00000003607	-	93	78.579	ENSORLG00000025841	-	86	78.579	Oryzias_latipes
ENSACLG00000003607	-	93	78.902	ENSORLG00000028038	-	86	78.902	Oryzias_latipes
ENSACLG00000003607	-	92	76.957	ENSORLG00000028428	-	81	76.957	Oryzias_latipes
ENSACLG00000003607	-	83	80.918	ENSORLG00000025660	-	99	80.918	Oryzias_latipes
ENSACLG00000003607	-	89	78.387	ENSORLG00020004983	-	85	78.387	Oryzias_latipes_hni
ENSACLG00000003607	-	93	78.794	ENSORLG00020010783	-	86	78.794	Oryzias_latipes_hni
ENSACLG00000003607	-	83	80.918	ENSORLG00020006197	-	99	80.918	Oryzias_latipes_hni
ENSACLG00000003607	-	87	80.161	ENSORLG00020020895	-	100	80.161	Oryzias_latipes_hni
ENSACLG00000003607	-	87	79.931	ENSORLG00020020703	-	100	79.931	Oryzias_latipes_hni
ENSACLG00000003607	-	93	79.225	ENSPREG00000022240	-	86	79.225	Poecilia_reticulata
ENSACLG00000003607	-	83	81.620	ENSXMAG00000021428	-	99	81.620	Xiphophorus_maculatus