EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000003748 (Gene tree)
Gene ID: 113008246
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC113008246
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 5274 bases
Position: chr16:30443116-30448389
Accession: 113008246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000005565	RVT_1	PF00078.27	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000005685	-	5274	-	ENSACLP00000005565	1757 (aa)	XP_026001319	UPI000E40F7E3

Gene Model

Click here to download ENSACLG00000003748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000003748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000003748	-	62	32.085	ENSACLG00000015360	-	56	32.085
ENSACLG00000003748	-	98	57.574	ENSACLG00000013718	-	99	57.574
ENSACLG00000003748	-	64	35.986	ENSACLG00000003852	-	80	35.986
ENSACLG00000003748	-	64	36.441	ENSACLG00000027747	-	77	36.441
ENSACLG00000003748	-	62	32.085	ENSACLG00000012239	-	56	32.085
ENSACLG00000003748	-	66	35.308	ENSACLG00000020275	-	75	35.308
ENSACLG00000003748	-	65	37.205	ENSACLG00000005531	-	85	37.205
ENSACLG00000003748	-	66	35.382	ENSACLG00000012963	-	75	35.548
ENSACLG00000003748	-	66	49.915	ENSACLG00000000384	-	77	49.915
ENSACLG00000003748	-	66	50.716	ENSACLG00000024387	-	97	50.716
ENSACLG00000003748	-	64	68.750	ENSACLG00000004344	-	74	68.750
ENSACLG00000003748	-	60	50.046	ENSACLG00000019658	-	78	49.954
ENSACLG00000003748	-	65	36.201	ENSACLG00000006945	-	81	36.201
ENSACLG00000003748	-	65	48.431	ENSACLG00000027618	-	75	48.559
ENSACLG00000003748	-	65	36.600	ENSACLG00000015880	-	86	36.600
ENSACLG00000003748	-	99	57.489	ENSACLG00000002176	-	83	57.489
ENSACLG00000003748	-	56	37.898	ENSACLG00000013455	-	70	37.898
ENSACLG00000003748	-	51	36.094	ENSACLG00000021770	-	65	36.094
ENSACLG00000003748	-	65	36.286	ENSACLG00000003799	-	81	36.286
ENSACLG00000003748	-	60	49.954	ENSACLG00000002182	-	78	49.861
ENSACLG00000003748	-	56	38.786	ENSACLG00000009118	-	71	38.786
ENSACLG00000003748	-	60	37.578	ENSACLG00000001282	-	76	37.489
ENSACLG00000003748	-	56	38.590	ENSACLG00000016624	-	71	38.688
ENSACLG00000003748	-	63	34.741	ENSACLG00000018344	-	93	34.741
ENSACLG00000003748	-	56	37.898	ENSACLG00000003361	-	70	37.898
ENSACLG00000003748	-	56	38.150	ENSACLG00000025904	-	69	38.247
ENSACLG00000003748	-	59	40.367	ENSACLG00000023495	-	87	40.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000003748	-	65	35.013	ENSAPOG00000011081	-	75	35.013	Acanthochromis_polyacanthus
ENSACLG00000003748	-	65	31.426	ENSAPOG00000000887	-	78	31.668	Acanthochromis_polyacanthus
ENSACLG00000003748	-	66	35.270	ENSAPOG00000005387	-	75	35.516	Acanthochromis_polyacanthus
ENSACLG00000003748	-	64	35.997	ENSAPOG00000022647	-	77	35.997	Acanthochromis_polyacanthus
ENSACLG00000003748	-	57	51.823	ENSAPEG00000015494	-	78	52.071	Amphiprion_percula
ENSACLG00000003748	-	65	49.488	ENSAPEG00000015779	-	78	49.701	Amphiprion_percula
ENSACLG00000003748	-	65	35.570	ENSAPEG00000024442	-	74	35.906	Amphiprion_percula
ENSACLG00000003748	-	52	39.545	ENSAPEG00000002424	-	67	39.545	Amphiprion_percula
ENSACLG00000003748	-	53	34.411	ENSAPEG00000002572	-	96	34.411	Amphiprion_percula
ENSACLG00000003748	-	62	36.453	ENSAMXG00000043385	-	82	36.453	Astyanax_mexicanus
ENSACLG00000003748	-	62	37.366	ENSAMXG00000038338	-	79	37.366	Astyanax_mexicanus
ENSACLG00000003748	-	65	35.714	ENSAMXG00000038531	-	82	35.714	Astyanax_mexicanus
ENSACLG00000003748	-	65	36.251	ENSAMXG00000043312	-	75	36.251	Astyanax_mexicanus
ENSACLG00000003748	-	65	36.311	ENSAMXG00000032330	-	79	36.311	Astyanax_mexicanus
ENSACLG00000003748	-	62	34.389	ENSAMXG00000039473	-	98	34.389	Astyanax_mexicanus
ENSACLG00000003748	-	60	32.320	ENSAMXG00000030908	-	93	32.320	Astyanax_mexicanus
ENSACLG00000003748	-	85	54.563	ENSAMXG00000037247	-	98	54.563	Astyanax_mexicanus
ENSACLG00000003748	-	65	36.356	ENSAMXG00000038997	-	75	36.334	Astyanax_mexicanus
ENSACLG00000003748	-	66	35.075	ENSAMXG00000044052	-	75	35.075	Astyanax_mexicanus
ENSACLG00000003748	-	53	38.832	ENSAMXG00000032783	-	70	38.832	Astyanax_mexicanus
ENSACLG00000003748	-	70	32.918	ENSAMXG00000033629	-	69	32.918	Astyanax_mexicanus
ENSACLG00000003748	-	64	35.229	ENSAMXG00000033912	-	91	35.459	Astyanax_mexicanus
ENSACLG00000003748	-	65	33.191	ENSAMXG00000037864	-	94	33.191	Astyanax_mexicanus
ENSACLG00000003748	-	56	38.722	ENSAMXG00000039110	-	73	38.722	Astyanax_mexicanus
ENSACLG00000003748	-	65	36.095	ENSAMXG00000035335	-	82	36.095	Astyanax_mexicanus
ENSACLG00000003748	-	66	34.764	ENSAMXG00000030479	-	82	34.764	Astyanax_mexicanus
ENSACLG00000003748	-	60	33.275	ENSAMXG00000035138	-	74	33.449	Astyanax_mexicanus
ENSACLG00000003748	-	56	54.609	ENSCVAG00000019395	-	75	54.609	Cyprinodon_variegatus
ENSACLG00000003748	-	71	35.120	ENSCVAG00000005047	-	71	35.120	Cyprinodon_variegatus
ENSACLG00000003748	-	66	36.393	ENSGAFG00000016352	-	93	36.475	Gambusia_affinis
ENSACLG00000003748	-	62	56.624	ENSGAFG00000017103	-	74	56.624	Gambusia_affinis
ENSACLG00000003748	-	66	37.261	ENSGAFG00000016760	-	78	37.261	Gambusia_affinis
ENSACLG00000003748	-	71	35.038	ENSGAFG00000013212	-	62	35.038	Gambusia_affinis
ENSACLG00000003748	-	65	35.099	ENSHBUG00000021107	-	73	35.099	Haplochromis_burtoni
ENSACLG00000003748	-	65	34.471	ENSHCOG00000012267	-	98	34.471	Hippocampus_comes
ENSACLG00000003748	-	66	34.457	ENSKMAG00000012706	-	76	34.457	Kryptolebias_marmoratus
ENSACLG00000003748	-	55	32.947	ENSMZEG00005025542	-	78	32.947	Maylandia_zebra
ENSACLG00000003748	-	58	35.300	ENSMZEG00005023862	-	96	35.300	Maylandia_zebra
ENSACLG00000003748	-	60	75.947	ENSMZEG00005012274	-	76	75.947	Maylandia_zebra
ENSACLG00000003748	-	52	38.071	ENSMALG00000020759	-	71	38.382	Monopterus_albus
ENSACLG00000003748	-	50	69.911	ENSORLG00000025132	-	70	69.911	Oryzias_latipes
ENSACLG00000003748	-	65	36.176	ENSORLG00000022361	-	80	36.356	Oryzias_latipes
ENSACLG00000003748	-	56	38.147	ENSORLG00000025397	-	95	38.147	Oryzias_latipes
ENSACLG00000003748	-	63	64.203	ENSORLG00000029435	-	78	64.203	Oryzias_latipes
ENSACLG00000003748	-	71	34.851	ENSORLG00000022415	-	61	34.851	Oryzias_latipes
ENSACLG00000003748	-	65	36.082	ENSORLG00000029990	-	83	36.082	Oryzias_latipes
ENSACLG00000003748	-	65	30.973	ENSORLG00000027538	-	80	30.973	Oryzias_latipes
ENSACLG00000003748	-	85	44.208	ENSORLG00000026266	-	84	44.344	Oryzias_latipes
ENSACLG00000003748	-	65	35.211	ENSORLG00000024795	-	74	35.211	Oryzias_latipes
ENSACLG00000003748	-	66	37.273	ENSORLG00000030569	-	77	37.273	Oryzias_latipes
ENSACLG00000003748	-	65	36.176	ENSORLG00000023909	-	80	36.356	Oryzias_latipes
ENSACLG00000003748	-	53	36.448	ENSORLG00000024878	-	99	36.448	Oryzias_latipes
ENSACLG00000003748	-	72	33.333	ENSORLG00000029628	-	70	33.333	Oryzias_latipes
ENSACLG00000003748	-	56	40.098	ENSORLG00000027117	-	73	40.098	Oryzias_latipes
ENSACLG00000003748	-	87	43.794	ENSORLG00000023802	-	79	43.794	Oryzias_latipes
ENSACLG00000003748	-	65	36.538	ENSORLG00000029329	-	75	36.538	Oryzias_latipes
ENSACLG00000003748	-	66	37.273	ENSORLG00000028547	-	77	37.273	Oryzias_latipes
ENSACLG00000003748	-	65	36.622	ENSORLG00000024900	-	77	36.622	Oryzias_latipes
ENSACLG00000003748	-	65	35.085	ENSORLG00000023514	-	84	35.085	Oryzias_latipes
ENSACLG00000003748	-	65	35.319	ENSORLG00000023024	-	84	35.319	Oryzias_latipes
ENSACLG00000003748	-	65	35.911	ENSORLG00000022054	-	83	35.911	Oryzias_latipes
ENSACLG00000003748	-	65	35.245	ENSORLG00000022989	-	74	35.245	Oryzias_latipes
ENSACLG00000003748	-	59	37.617	ENSORLG00000028051	-	76	37.617	Oryzias_latipes
ENSACLG00000003748	-	62	36.071	ENSORLG00020016398	-	74	38.462	Oryzias_latipes_hni
ENSACLG00000003748	-	87	43.794	ENSORLG00020005747	-	78	43.794	Oryzias_latipes_hni
ENSACLG00000003748	-	65	36.356	ENSORLG00020000868	-	88	36.442	Oryzias_latipes_hni
ENSACLG00000003748	-	87	43.794	ENSORLG00020015468	-	78	43.794	Oryzias_latipes_hni
ENSACLG00000003748	-	53	39.356	ENSORLG00020017608	-	88	39.356	Oryzias_latipes_hni
ENSACLG00000003748	-	65	35.508	ENSORLG00020007775	-	84	35.319	Oryzias_latipes_hni
ENSACLG00000003748	-	65	36.647	ENSORLG00020009176	-	79	36.647	Oryzias_latipes_hni
ENSACLG00000003748	-	63	64.470	ENSORLG00020022538	-	78	64.470	Oryzias_latipes_hni
ENSACLG00000003748	-	74	36.142	ENSORLG00015022031	-	76	36.142	Oryzias_latipes_hsok
ENSACLG00000003748	-	66	37.273	ENSORLG00015013242	-	78	37.273	Oryzias_latipes_hsok
ENSACLG00000003748	-	58	32.827	ENSORLG00015022419	-	70	32.827	Oryzias_latipes_hsok
ENSACLG00000003748	-	87	43.957	ENSORLG00015000522	-	78	43.957	Oryzias_latipes_hsok
ENSACLG00000003748	-	59	65.517	ENSORLG00015017494	-	85	65.517	Oryzias_latipes_hsok
ENSACLG00000003748	-	65	36.288	ENSORLG00015003194	-	76	36.288	Oryzias_latipes_hsok
ENSACLG00000003748	-	65	35.429	ENSORLG00015001207	-	91	35.429	Oryzias_latipes_hsok
ENSACLG00000003748	-	65	36.785	ENSORLG00015000431	-	79	36.785	Oryzias_latipes_hsok
ENSACLG00000003748	-	62	37.699	ENSORLG00015010457	-	84	37.699	Oryzias_latipes_hsok
ENSACLG00000003748	-	67	62.215	ENSORLG00015022999	-	75	62.215	Oryzias_latipes_hsok
ENSACLG00000003748	-	71	35.129	ENSOMEG00000012792	-	74	35.129	Oryzias_melastigma
ENSACLG00000003748	-	62	35.439	ENSOMEG00000000573	-	97	35.439	Oryzias_melastigma
ENSACLG00000003748	-	65	36.869	ENSOMEG00000012350	-	79	36.869	Oryzias_melastigma
ENSACLG00000003748	-	65	35.756	ENSOMEG00000007894	-	75	35.756	Oryzias_melastigma
ENSACLG00000003748	-	66	35.323	ENSOMEG00000021861	-	75	35.323	Oryzias_melastigma
ENSACLG00000003748	-	66	31.570	ENSOMEG00000009707	-	84	31.695	Oryzias_melastigma
ENSACLG00000003748	-	65	36.304	ENSPKIG00000002357	-	71	36.304	Paramormyrops_kingsleyae
ENSACLG00000003748	-	65	35.970	ENSPKIG00000021764	-	77	35.970	Paramormyrops_kingsleyae
ENSACLG00000003748	-	54	33.268	ENSPKIG00000012188	-	73	33.399	Paramormyrops_kingsleyae
ENSACLG00000003748	-	55	36.735	ENSPKIG00000020388	-	74	36.735	Paramormyrops_kingsleyae
ENSACLG00000003748	-	65	34.876	ENSPKIG00000000869	-	74	35.041	Paramormyrops_kingsleyae
ENSACLG00000003748	-	65	36.477	ENSPKIG00000010959	-	74	36.477	Paramormyrops_kingsleyae
ENSACLG00000003748	-	66	34.790	ENSPKIG00000023888	-	79	34.790	Paramormyrops_kingsleyae
ENSACLG00000003748	-	67	36.409	ENSPKIG00000014510	-	74	36.409	Paramormyrops_kingsleyae
ENSACLG00000003748	-	52	34.137	ENSPMEG00000002683	-	65	34.137	Poecilia_mexicana
ENSACLG00000003748	-	66	37.353	ENSPREG00000004621	-	78	37.353	Poecilia_reticulata
ENSACLG00000003748	-	61	49.591	ENSPREG00000003809	-	79	49.591	Poecilia_reticulata
ENSACLG00000003748	-	55	39.777	ENSPNAG00000017165	-	72	39.777	Pygocentrus_nattereri
ENSACLG00000003748	-	54	34.884	ENSPNAG00000009767	-	97	34.884	Pygocentrus_nattereri
ENSACLG00000003748	-	64	35.345	ENSSLDG00000001005	-	81	35.172	Seriola_lalandi_dorsalis
ENSACLG00000003748	-	65	35.953	ENSSPAG00000006326	-	76	35.953	Stegastes_partitus
ENSACLG00000003748	-	59	35.616	ENSXMAG00000021254	-	75	35.616	Xiphophorus_maculatus
ENSACLG00000003748	-	59	34.047	ENSXMAG00000024180	-	100	34.047	Xiphophorus_maculatus
ENSACLG00000003748	-	65	36.302	ENSXMAG00000024126	-	82	36.302	Xiphophorus_maculatus
ENSACLG00000003748	-	65	48.198	ENSXMAG00000023536	-	79	48.567	Xiphophorus_maculatus
ENSACLG00000003748	-	65	36.302	ENSXMAG00000021686	-	82	36.302	Xiphophorus_maculatus
ENSACLG00000003748	-	66	36.191	ENSXMAG00000022175	-	74	36.191	Xiphophorus_maculatus
ENSACLG00000003748	-	67	35.466	ENSXMAG00000026492	-	76	35.466	Xiphophorus_maculatus
ENSACLG00000003748	-	63	47.792	ENSXMAG00000025551	-	99	47.879	Xiphophorus_maculatus
ENSACLG00000003748	-	64	35.986	ENSXMAG00000028850	-	82	35.986	Xiphophorus_maculatus
ENSACLG00000003748	-	65	36.030	ENSXMAG00000028155	-	74	36.197	Xiphophorus_maculatus
ENSACLG00000003748	-	64	33.651	ENSXMAG00000026865	-	86	33.651	Xiphophorus_maculatus
ENSACLG00000003748	-	65	35.184	ENSXMAG00000022159	-	92	35.184	Xiphophorus_maculatus
ENSACLG00000003748	-	64	35.986	ENSXMAG00000023206	-	82	35.986	Xiphophorus_maculatus
ENSACLG00000003748	-	65	48.198	ENSXMAG00000029413	-	79	48.567	Xiphophorus_maculatus
ENSACLG00000003748	-	64	35.986	ENSXMAG00000021696	-	82	35.986	Xiphophorus_maculatus
ENSACLG00000003748	-	52	34.102	ENSXMAG00000025715	-	67	34.102	Xiphophorus_maculatus
ENSACLG00000003748	-	65	36.030	ENSXMAG00000029008	-	74	36.197	Xiphophorus_maculatus