EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000003782 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC113018676
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4101 bases
Position: chr2:600732-604832
Accession: 113018676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000005603	RVT_1	PF00078.27	3.2e-23	1	1
ENSACLP00000005603	RNase_H	PF00075.24	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000005724	-	4101	XM_026149487	ENSACLP00000005603	1366 (aa)	XP_026005272	-

Gene Model

Click here to download ENSACLG00000003782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000003782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000003782	-	53	30.213	ENSACLG00000027633	-	63	30.213
ENSACLG00000003782	-	86	57.373	ENSACLG00000023027	-	94	57.265
ENSACLG00000003782	-	52	34.653	ENSACLG00000005138	-	81	34.653
ENSACLG00000003782	-	98	56.538	ENSACLG00000006254	-	96	56.538
ENSACLG00000003782	-	83	34.653	ENSACLG00000014318	-	85	34.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000003782	-	65	36.344	ENSAPEG00000000438	-	98	36.344	Amphiprion_percula
ENSACLG00000003782	-	87	52.799	ENSAMXG00000033455	-	99	52.799	Astyanax_mexicanus
ENSACLG00000003782	-	64	35.650	ENSAMXG00000038483	-	67	35.650	Astyanax_mexicanus
ENSACLG00000003782	-	75	30.306	ENSAMXG00000033060	-	87	30.306	Astyanax_mexicanus
ENSACLG00000003782	-	84	33.051	ENSAMXG00000040526	-	97	33.220	Astyanax_mexicanus
ENSACLG00000003782	-	65	34.994	ENSBTAG00000052165	-	88	34.994	Bos_taurus
ENSACLG00000003782	-	67	34.264	ENSCPBG00000009184	-	97	34.264	Chrysemys_picta_bellii
ENSACLG00000003782	-	90	65.472	ENSCSEG00000018136	-	98	65.472	Cynoglossus_semilaevis
ENSACLG00000003782	-	90	65.472	ENSCSEG00000012922	-	98	65.472	Cynoglossus_semilaevis
ENSACLG00000003782	-	90	32.009	ENSCSEG00000019226	-	69	31.903	Cynoglossus_semilaevis
ENSACLG00000003782	-	90	65.472	ENSCSEG00000009059	-	98	65.472	Cynoglossus_semilaevis
ENSACLG00000003782	-	90	65.472	ENSCSEG00000011566	-	98	65.472	Cynoglossus_semilaevis
ENSACLG00000003782	-	90	65.472	ENSCSEG00000013867	-	98	65.472	Cynoglossus_semilaevis
ENSACLG00000003782	-	74	33.749	ENSECAG00000034459	-	92	34.036	Equus_caballus
ENSACLG00000003782	-	64	33.032	ENSGALG00000050905	-	93	33.032	Gallus_gallus
ENSACLG00000003782	-	63	32.390	ENSGALG00000053504	-	92	32.390	Gallus_gallus
ENSACLG00000003782	-	98	33.788	ENSLBEG00000013565	-	99	33.861	Labrus_bergylta
ENSACLG00000003782	-	88	62.914	ENSMAMG00000010978	-	98	62.914	Mastacembelus_armatus
ENSACLG00000003782	-	75	32.543	ENSMODG00000028573	-	91	32.543	Monodelphis_domestica
ENSACLG00000003782	-	51	31.906	ENSMODG00000027329	-	99	31.630	Monodelphis_domestica
ENSACLG00000003782	-	75	32.448	ENSMODG00000027641	-	91	32.448	Monodelphis_domestica
ENSACLG00000003782	-	60	31.604	ENSMODG00000027851	-	98	31.368	Monodelphis_domestica
ENSACLG00000003782	-	51	32.044	ENSMODG00000028191	-	99	31.768	Monodelphis_domestica
ENSACLG00000003782	-	82	40.000	ENSMODG00000027428	-	91	40.000	Monodelphis_domestica
ENSACLG00000003782	-	51	32.182	ENSMODG00000029806	-	99	31.906	Monodelphis_domestica
ENSACLG00000003782	-	75	32.638	ENSMODG00000029698	-	91	32.638	Monodelphis_domestica
ENSACLG00000003782	-	59	36.585	ENSMODG00000028504	-	91	36.585	Monodelphis_domestica
ENSACLG00000003782	-	52	33.561	ENSMODG00000027448	-	88	33.288	Monodelphis_domestica
ENSACLG00000003782	-	75	32.796	ENSMODG00000028385	-	91	32.796	Monodelphis_domestica
ENSACLG00000003782	-	53	33.065	ENSMODG00000028692	-	99	33.065	Monodelphis_domestica
ENSACLG00000003782	-	75	32.543	ENSMODG00000029722	-	93	32.543	Monodelphis_domestica
ENSACLG00000003782	-	76	33.019	ENSMODG00000027661	-	90	33.019	Monodelphis_domestica
ENSACLG00000003782	-	55	32.637	ENSMODG00000027664	-	98	32.637	Monodelphis_domestica
ENSACLG00000003782	-	50	35.591	ENSMODG00000029647	-	82	36.474	Monodelphis_domestica
ENSACLG00000003782	-	51	32.182	ENSMODG00000029516	-	99	31.906	Monodelphis_domestica
ENSACLG00000003782	-	55	32.552	ENSMODG00000029316	-	90	32.292	Monodelphis_domestica
ENSACLG00000003782	-	74	32.314	ENSMODG00000029740	-	91	32.314	Monodelphis_domestica
ENSACLG00000003782	-	52	34.072	ENSONIG00000021274	-	98	34.072	Oreochromis_niloticus
ENSACLG00000003782	-	87	59.428	ENSONIG00000021180	-	98	59.428	Oreochromis_niloticus
ENSACLG00000003782	-	74	50.881	ENSORLG00020007796	-	66	50.881	Oryzias_latipes_hni
ENSACLG00000003782	-	63	33.671	ENSOMEG00000005516	-	98	33.671	Oryzias_melastigma
ENSACLG00000003782	-	98	32.251	ENSOMEG00000021132	-	98	32.014	Oryzias_melastigma
ENSACLG00000003782	-	50	31.960	ENSOARG00000001648	-	95	31.960	Ovis_aries
ENSACLG00000003782	-	56	33.333	ENSOARG00000009849	-	81	33.333	Ovis_aries
ENSACLG00000003782	-	56	33.206	ENSOARG00000014856	-	82	33.206	Ovis_aries
ENSACLG00000003782	-	77	32.721	ENSPSIG00000001866	-	94	33.090	Pelodiscus_sinensis
ENSACLG00000003782	-	74	32.659	ENSSSCG00000034853	-	88	32.755	Sus_scrofa
ENSACLG00000003782	-	65	62.304	ENSXMAG00000024544	-	94	62.458	Xiphophorus_maculatus
ENSACLG00000003782	-	98	36.596	ENSXMAG00000022532	-	96	36.523	Xiphophorus_maculatus