EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000004123 (Gene tree)
Gene ID: 113020449
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 11098 bases
Position: chr4:8814510-8825607
Accession: 113020449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000006116	MMR_HSR1	PF01926.23	4.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000006256	-	2748	-	ENSACLP00000006116	180 (aa)	XP_026020216	UPI00022B1C9D

Gene Model

Click here to download ENSACLG00000004123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000004123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000004123	-	91	31.429	ENSACLG00000005011	-	88	31.429
ENSACLG00000004123	-	97	85.057	ENSACLG00000005705	arf5	97	85.057
ENSACLG00000004123	-	96	48.315	ENSACLG00000014218	arl4cb	91	48.315
ENSACLG00000004123	-	85	44.937	ENSACLG00000026984	arl14	78	44.937
ENSACLG00000004123	-	91	46.341	ENSACLG00000012519	-	90	46.341
ENSACLG00000004123	-	98	50.282	ENSACLG00000019945	arl5a	99	50.282
ENSACLG00000004123	-	100	91.160	ENSACLG00000024971	arf3b	100	91.160
ENSACLG00000004123	-	99	93.296	ENSACLG00000017387	-	99	93.296
ENSACLG00000004123	-	91	31.395	ENSACLG00000024227	arl13b	73	31.395
ENSACLG00000004123	-	87	45.062	ENSACLG00000024991	arl4d	81	45.062
ENSACLG00000004123	-	96	41.758	ENSACLG00000020245	-	97	41.758
ENSACLG00000004123	-	83	68.000	ENSACLG00000022869	-	95	68.000
ENSACLG00000004123	-	90	33.742	ENSACLG00000013597	arl8ba	88	33.742
ENSACLG00000004123	-	92	33.735	ENSACLG00000021872	arl8bb	89	33.735
ENSACLG00000004123	-	98	42.623	ENSACLG00000016659	-	91	42.623
ENSACLG00000004123	-	74	33.835	ENSACLG00000013053	sar1ab	67	33.835
ENSACLG00000004123	-	88	50.625	ENSACLG00000021338	arl2	86	50.625
ENSACLG00000004123	-	100	91.160	ENSACLG00000006072	-	100	91.160
ENSACLG00000004123	-	97	44.633	ENSACLG00000008835	arl3l2	95	44.633
ENSACLG00000004123	-	94	34.615	ENSACLG00000002442	arfrp1	86	34.615
ENSACLG00000004123	-	92	46.386	ENSACLG00000027139	arl3	91	46.386
ENSACLG00000004123	-	97	82.184	ENSACLG00000025604	-	97	82.184
ENSACLG00000004123	-	98	59.322	ENSACLG00000008188	arl1	98	59.322
ENSACLG00000004123	-	100	91.713	ENSACLG00000022124	arf2b	100	91.713
ENSACLG00000004123	-	94	68.421	ENSACLG00000009822	-	91	68.421
ENSACLG00000004123	-	96	31.609	ENSACLG00000011996	arl8a	93	31.609
ENSACLG00000004123	-	97	42.308	ENSACLG00000024656	ARL6	98	42.308
ENSACLG00000004123	-	97	49.143	ENSACLG00000000787	arl8	98	49.143
ENSACLG00000004123	-	98	48.295	ENSACLG00000000922	arl5c	100	48.780
ENSACLG00000004123	-	88	43.373	ENSACLG00000011811	-	82	43.373
ENSACLG00000004123	-	96	46.927	ENSACLG00000014159	-	91	46.927
ENSACLG00000004123	-	87	54.717	ENSACLG00000015415	-	77	54.717

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000004123	-	100	98.333	ENSACIG00000012192	-	100	98.333	Amphilophus_citrinellus
ENSACLG00000004123	-	84	95.364	ENSAOCG00000001275	-	88	95.364	Amphiprion_ocellaris
ENSACLG00000004123	-	100	95.000	ENSAPEG00000016909	-	100	95.000	Amphiprion_percula
ENSACLG00000004123	-	100	96.667	ENSATEG00000003174	-	100	96.667	Anabas_testudineus
ENSACLG00000004123	-	100	92.818	ENSAMXG00000019845	arf1	100	92.818	Astyanax_mexicanus
ENSACLG00000004123	-	100	96.111	ENSCVAG00000013374	-	100	96.111	Cyprinodon_variegatus
ENSACLG00000004123	-	100	92.818	ENSDARG00000009484	arf1	100	92.818	Danio_rerio
ENSACLG00000004123	-	100	93.370	ENSELUG00000022533	arf1	79	93.370	Esox_lucius
ENSACLG00000004123	-	100	96.111	ENSFHEG00000005859	-	100	96.111	Fundulus_heteroclitus
ENSACLG00000004123	-	96	91.379	ENSGMOG00000000429	arf1	95	91.379	Gadus_morhua
ENSACLG00000004123	-	100	96.111	ENSGAFG00000018151	-	100	96.111	Gambusia_affinis
ENSACLG00000004123	-	100	85.556	ENSGACG00000014195	-	97	85.556	Gasterosteus_aculeatus
ENSACLG00000004123	-	100	100.000	ENSHBUG00000002636	-	100	100.000	Haplochromis_burtoni
ENSACLG00000004123	-	100	93.370	ENSIPUG00000006311	arf1	100	93.370	Ictalurus_punctatus
ENSACLG00000004123	-	100	93.333	ENSKMAG00000018315	-	100	93.333	Kryptolebias_marmoratus
ENSACLG00000004123	-	99	89.944	ENSLBEG00000001998	arf1	99	89.944	Labrus_bergylta
ENSACLG00000004123	-	99	88.202	ENSLBEG00000023263	-	98	88.202	Labrus_bergylta
ENSACLG00000004123	-	100	95.556	ENSMAMG00000001553	-	100	95.556	Mastacembelus_armatus
ENSACLG00000004123	-	100	100.000	ENSMZEG00005022594	-	100	100.000	Maylandia_zebra
ENSACLG00000004123	-	100	96.667	ENSMALG00000004269	-	100	96.667	Monopterus_albus
ENSACLG00000004123	-	100	100.000	ENSNBRG00000016455	-	100	100.000	Neolamprologus_brichardi
ENSACLG00000004123	-	100	100.000	ENSONIG00000001286	-	100	100.000	Oreochromis_niloticus
ENSACLG00000004123	-	100	95.556	ENSORLG00000023270	-	100	95.556	Oryzias_latipes
ENSACLG00000004123	-	100	95.000	ENSORLG00020006712	-	100	95.000	Oryzias_latipes_hni
ENSACLG00000004123	-	100	95.556	ENSORLG00015019836	-	100	95.556	Oryzias_latipes_hsok
ENSACLG00000004123	-	100	95.556	ENSOMEG00000023784	-	100	95.556	Oryzias_melastigma
ENSACLG00000004123	-	100	90.608	ENSPMGG00000014174	arf1	100	90.608	Periophthalmus_magnuspinnatus
ENSACLG00000004123	-	100	91.667	ENSPMAG00000002035	arf1	100	91.667	Petromyzon_marinus
ENSACLG00000004123	-	100	96.111	ENSPFOG00000014787	-	100	96.111	Poecilia_formosa
ENSACLG00000004123	-	100	96.111	ENSPLAG00000001041	-	100	96.111	Poecilia_latipinna
ENSACLG00000004123	-	100	96.111	ENSPMEG00000024077	-	100	96.111	Poecilia_mexicana
ENSACLG00000004123	-	100	96.111	ENSPREG00000009009	-	100	96.111	Poecilia_reticulata
ENSACLG00000004123	-	100	100.000	ENSPNYG00000009472	-	100	100.000	Pundamilia_nyererei
ENSACLG00000004123	-	94	94.675	ENSPNAG00000000098	arf1	93	94.675	Pygocentrus_nattereri
ENSACLG00000004123	-	99	77.222	YDL192W	-	99	77.222	Saccharomyces_cerevisiae
ENSACLG00000004123	-	99	76.536	YDL137W	-	99	76.536	Saccharomyces_cerevisiae
ENSACLG00000004123	-	100	89.444	ENSSMAG00000006125	-	100	89.444	Scophthalmus_maximus
ENSACLG00000004123	-	100	95.000	ENSSDUG00000017356	-	100	95.000	Seriola_dumerili
ENSACLG00000004123	-	100	95.000	ENSSLDG00000008504	-	100	95.000	Seriola_lalandi_dorsalis
ENSACLG00000004123	-	100	96.111	ENSSPAG00000011431	-	100	96.111	Stegastes_partitus
ENSACLG00000004123	-	100	93.889	ENSTRUG00000019870	-	100	93.889	Takifugu_rubripes
ENSACLG00000004123	-	100	92.222	ENSTNIG00000011685	-	100	92.222	Tetraodon_nigroviridis
ENSACLG00000004123	-	100	96.111	ENSXCOG00000016687	-	98	96.111	Xiphophorus_couchianus
ENSACLG00000004123	-	100	96.111	ENSXMAG00000009193	-	100	96.111	Xiphophorus_maculatus