EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000004165 (Gene tree)
Gene ID: 113020451
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 27903 bases
Position: chr4:8850622-8878524
Accession: 113020451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000006194	zf-C2H2_jaz	PF12171.8	6.4e-06	1	1
ENSACLP00000006178	zf-C2H2_jaz	PF12171.8	6.7e-06	1	1
ENSACLP00000006178	G-patch	PF01585.23	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000006319	-	5296	-	ENSACLP00000006178	1487 (aa)	XP_026020217	UPI000E407E63
ENSACLT00000006335	-	4360	-	ENSACLP00000006194	1424 (aa)	XP_026020218	UPI000E4018AC

Gene Model

Click here to download ENSACLG00000004165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000004165's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000004165	gpatch8	100	89.023	ENSAPOG00000023938	gpatch8	100	89.224	Acanthochromis_polyacanthus
ENSACLG00000004165	gpatch8	100	92.570	ENSACIG00000012241	gpatch8	100	92.905	Amphilophus_citrinellus
ENSACLG00000004165	gpatch8	100	88.822	ENSAOCG00000018102	gpatch8	100	88.822	Amphiprion_ocellaris
ENSACLG00000004165	gpatch8	100	88.889	ENSAPEG00000016776	gpatch8	100	88.889	Amphiprion_percula
ENSACLG00000004165	gpatch8	100	84.672	ENSATEG00000003247	gpatch8	100	84.605	Anabas_testudineus
ENSACLG00000004165	gpatch8	59	60.534	ENSAMXG00000041683	gpatch8	57	62.130	Astyanax_mexicanus
ENSACLG00000004165	gpatch8	100	80.454	ENSCSEG00000021277	gpatch8	100	80.320	Cynoglossus_semilaevis
ENSACLG00000004165	gpatch8	100	82.443	ENSCVAG00000013477	gpatch8	100	82.577	Cyprinodon_variegatus
ENSACLG00000004165	gpatch8	100	64.128	ENSDARG00000059768	gpatch8	56	61.343	Danio_rerio
ENSACLG00000004165	gpatch8	100	64.827	ENSELUG00000019920	gpatch8	57	64.432	Esox_lucius
ENSACLG00000004165	gpatch8	56	73.086	ENSFHEG00000005791	gpatch8	100	80.387	Fundulus_heteroclitus
ENSACLG00000004165	gpatch8	79	55.329	ENSGALG00000041556	GPATCH8	75	53.931	Gallus_gallus
ENSACLG00000004165	gpatch8	100	82.219	ENSGAFG00000018138	gpatch8	100	82.019	Gambusia_affinis
ENSACLG00000004165	gpatch8	100	99.195	ENSHBUG00000002669	gpatch8	100	99.195	Haplochromis_burtoni
ENSACLG00000004165	gpatch8	73	57.983	ENSHGLG00100010738	GPATCH8	61	61.157	Heterocephalus_glaber_male
ENSACLG00000004165	gpatch8	100	72.836	ENSHCOG00000017518	gpatch8	100	72.770	Hippocampus_comes
ENSACLG00000004165	gpatch8	59	60.352	ENSIPUG00000015431	gpatch8	55	61.234	Ictalurus_punctatus
ENSACLG00000004165	gpatch8	100	82.899	ENSKMAG00000018364	gpatch8	100	82.218	Kryptolebias_marmoratus
ENSACLG00000004165	gpatch8	100	82.455	ENSLBEG00000023352	gpatch8	100	82.722	Labrus_bergylta
ENSACLG00000004165	gpatch8	61	81.034	ENSLOCG00000012265	gpatch8	76	75.887	Lepisosteus_oculatus
ENSACLG00000004165	gpatch8	99	86.299	ENSMAMG00000001618	gpatch8	100	86.229	Mastacembelus_armatus
ENSACLG00000004165	gpatch8	100	99.798	ENSMZEG00005022584	gpatch8	100	99.798	Maylandia_zebra
ENSACLG00000004165	gpatch8	61	81.046	ENSMMOG00000020472	gpatch8	100	81.728	Mola_mola
ENSACLG00000004165	gpatch8	100	84.626	ENSMALG00000004204	gpatch8	100	82.955	Monopterus_albus
ENSACLG00000004165	gpatch8	100	98.793	ENSNBRG00000016402	gpatch8	100	98.793	Neolamprologus_brichardi
ENSACLG00000004165	gpatch8	100	94.236	ENSONIG00000001292	gpatch8	100	97.741	Oreochromis_niloticus
ENSACLG00000004165	gpatch8	56	74.703	ENSORLG00000028497	gpatch8	100	79.535	Oryzias_latipes
ENSACLG00000004165	gpatch8	96	77.963	ENSORLG00020006656	gpatch8	100	79.521	Oryzias_latipes_hni
ENSACLG00000004165	gpatch8	56	74.822	ENSORLG00015019797	gpatch8	100	79.920	Oryzias_latipes_hsok
ENSACLG00000004165	gpatch8	56	74.344	ENSOMEG00000023809	gpatch8	100	80.387	Oryzias_melastigma
ENSACLG00000004165	gpatch8	56	55.924	ENSPKIG00000004860	GPATCH8	54	55.792	Paramormyrops_kingsleyae
ENSACLG00000004165	gpatch8	61	52.253	ENSPKIG00000018753	gpatch8	56	54.865	Paramormyrops_kingsleyae
ENSACLG00000004165	gpatch8	100	77.542	ENSPMGG00000000730	gpatch8	99	77.756	Periophthalmus_magnuspinnatus
ENSACLG00000004165	gpatch8	100	82.687	ENSPFOG00000014833	gpatch8	100	82.286	Poecilia_formosa
ENSACLG00000004165	gpatch8	100	82.687	ENSPLAG00000001035	gpatch8	100	82.620	Poecilia_latipinna
ENSACLG00000004165	gpatch8	100	82.620	ENSPMEG00000024032	gpatch8	100	82.553	Poecilia_mexicana
ENSACLG00000004165	gpatch8	100	82.353	ENSPREG00000008911	gpatch8	100	82.152	Poecilia_reticulata
ENSACLG00000004165	gpatch8	100	99.664	ENSPNYG00000009426	gpatch8	100	99.664	Pundamilia_nyererei
ENSACLG00000004165	gpatch8	59	61.135	ENSPNAG00000016200	gpatch8	58	63.895	Pygocentrus_nattereri
ENSACLG00000004165	gpatch8	56	55.698	ENSSFOG00015004299	GPATCH8	55	57.639	Scleropages_formosus
ENSACLG00000004165	gpatch8	55	55.621	ENSSFOG00015021377	-	55	57.093	Scleropages_formosus
ENSACLG00000004165	gpatch8	100	87.017	ENSSDUG00000018065	gpatch8	100	86.948	Seriola_dumerili
ENSACLG00000004165	gpatch8	100	88.016	ENSSLDG00000009225	gpatch8	100	88.016	Seriola_lalandi_dorsalis
ENSACLG00000004165	gpatch8	50	45.442	ENSSPUG00000011251	GPATCH8	55	43.873	Sphenodon_punctatus
ENSACLG00000004165	gpatch8	100	89.157	ENSSPAG00000011368	gpatch8	100	89.090	Stegastes_partitus
ENSACLG00000004165	gpatch8	100	78.548	ENSTRUG00000020474	gpatch8	100	78.348	Takifugu_rubripes
ENSACLG00000004165	gpatch8	60	63.846	ENSTBEG00000009486	GPATCH8	56	64.591	Tupaia_belangeri
ENSACLG00000004165	gpatch8	56	69.492	ENSXETG00000008843	gpatch8	58	64.777	Xenopus_tropicalis
ENSACLG00000004165	gpatch8	100	81.800	ENSXCOG00000016680	gpatch8	100	81.467	Xiphophorus_couchianus
ENSACLG00000004165	gpatch8	100	81.988	ENSXMAG00000009217	gpatch8	100	82.055	Xiphophorus_maculatus